NO01G01900, NO01G01900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01900 vs. NCBI_GenBank
Match: OQS07555.1 (cGMP-dependent 3',5'-cGMP phosphodiesterase [Thraustotheca clavata]) HSP 1 Score: 72.0 bits (175), Expect = 2.600e-9 Identity = 48/171 (28.07%), Postives = 82/171 (47.95%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSM----GDYFGEAAFAPLTATPGHDEVRALTDVELIVFAGSELRHLL 168 +++VH + +P S L+ AP GV++T+ VP + PE + VL LV I DLTL A L+++ + Y VV+ G+ FY++ G + +P +D D +++ +++ V S GDYF + G + + T V L+ F S++ L Sbjct: 432 VFVVHTAAKDIPADSGLRAAPEGVQHTIIVPTERPESASTLEVLDLVRKIDIFVDLTLTDAYELIQMAKRVTYNKTSVVLDYGASADTFYIVIAGEAQAIFPPED----DMHQHSRKRLSTVPRSKKYVPGDYFDLQYLLTPNSIAGCTIIASST-VSLLEFNASDMSWFL 597
BLAST of NO01G01900 vs. NCBI_GenBank
Match: PKN19715.1 (cAMP/cGMP-dependent 3',5'-cyclic-AMP/GMP phosphodiesterase [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-6]) HSP 1 Score: 72.0 bits (175), Expect = 2.600e-9 Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAF-----APLTATPGHDEVRALT---DVELIVFAGSELRHLL 168 MYLVHV+ ++P S L++AP G+ NT+E+ V +AI +L + +L +AR L + + Y A +V+ KG + FYV+ G++++T + D +G YFGE + TAT +V+ LT D L + G+E +LL Sbjct: 427 MYLVHVNPESIPCESSLRIAPTGLANTIELDVKSIPHDEAIEMLDTFSRVELFENLAFEKAREFLLVAGVEHYKASDVIFSKGDKGDKFYVVMSGIVDITLGGKMITTYD---------------VGGYFGEKSLFLDENRTATAT-SRTDVKLLTIRKDEMLSLIRGTESEYLL 585
BLAST of NO01G01900 vs. NCBI_GenBank
Match: PKL38890.1 (cAMP/cGMP-dependent 3',5'-cyclic-AMP/GMP phosphodiesterase [Spirochaetae bacterium HGW-Spirochaetae-1]) HSP 1 Score: 71.6 bits (174), Expect = 3.400e-9 Identity = 53/193 (27.46%), Postives = 95/193 (49.22%), Query Frame = 0 Query: 3 LVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDVELIVFAGSELRHLLADGPSVSRGLLQCRYFSSSSSLSFPSSS 196 + H+++ PK S+L +A G+++TL P F KA +L +++++ F+ ++T+ ++ LEI ++RY G ++ KG+R FY++ G + V D LD+ R + DYFGE A LT +V A TDV L + + +A G + LL+ +S + + S++ Sbjct: 428 IYHIAKKDFPKKSRLTLARFGMEHTLYFKARPPRFEKAYQILGILKNLDFMREITIDKSMEFLEIVEEERYRKGARILEKGARGDKFYIILSGNVSV-----DSGGLDQ---------RKIYGTYDYFGEVAV--LTEQTRAADVFAETDVVLFTIERDKFLNFIA-GTEFEKTLLRLIKIRTSETWNLLSNN 603
BLAST of NO01G01900 vs. NCBI_GenBank
Match: XP_008861208.1 (hypothetical protein H310_00276 [Aphanomyces invadans] >ETW09797.1 hypothetical protein H310_00276 [Aphanomyces invadans]) HSP 1 Score: 70.9 bits (172), Expect = 5.800e-9 Identity = 34/104 (32.69%), Postives = 55/104 (52.88%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRD 105 MY+VH + +P S L+ AP GV+NT+ VP D+PE + VL L+ I DLTL A ++++ + ++ G+ V G FY++ G + + D Sbjct: 438 MYVVHTAAKDIPVDSGLRPAPEGVQNTIIVPTDLPESASTMEVLDLIRKIDIFGDLTLNDAYEVIQMAQRVTFSKGDTVERSGEAADKFYIVIAGEAQCIFSHD 541
BLAST of NO01G01900 vs. NCBI_GenBank
Match: CBJ32522.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 70.5 bits (171), Expect = 7.500e-9 Identity = 35/95 (36.84%), Postives = 58/95 (61.05%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIG 96 +++VHVSE ++PK S LKVAP GVKNT+ + +A+ VL L+ + L+ +++ QAR LLE+ + R+ A +V + T+F ++ G Sbjct: 809 VFVVHVSESSIPKDSGLKVAPAGVKNTMRLDTIANIHEEALDVLDLICSVGILSGVSVAQARSLLEVARQVRFEANAIVQHRDIDTTDFAIICHG 903
BLAST of NO01G01900 vs. NCBI_GenBank
Match: XP_009532024.1 (hypothetical protein PHYSODRAFT_515964 [Phytophthora sojae] >EGZ11691.1 hypothetical protein PHYSODRAFT_515964 [Phytophthora sojae]) HSP 1 Score: 68.9 bits (167), Expect = 2.200e-8 Identity = 36/105 (34.29%), Postives = 58/105 (55.24%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVD-VPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRD 105 +Y+VH + +P L+ AP GV NT+ + V +PE A+ +L LV + A+LTL A +L++ K YA GE+V GS FY++ +G + + +D Sbjct: 399 VYVVHTAAKDLPDNCGLRGAPEGVHNTITLDVPRLPEHAGALEILDLVRKVDLFAELTLNHAYEILQMARKVEYAKGEIVSKTGSVGDTFYIIIVGEAQAVHSKD 503
BLAST of NO01G01900 vs. NCBI_GenBank
Match: XP_009830446.1 (hypothetical protein H257_06784 [Aphanomyces astaci] >ETV80522.1 hypothetical protein H257_06784 [Aphanomyces astaci]) HSP 1 Score: 68.9 bits (167), Expect = 2.200e-8 Identity = 37/134 (27.61%), Postives = 66/134 (49.25%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRV----HWSMGDYF 131 MY+VH + +P S L+ AP GV+NT+ VP ++PE + VL L+ I DLTL A ++++ + ++ E V G FY++ G + +P + +T +++ + + G+YF Sbjct: 439 MYVVHTAAKDIPANSGLRAAPEGVQNTIIVPTELPESASTMEVLDLIRKIDIFGDLTLNDAYEVIQMAKRVTFSKAETVQQAGQPTDKFYIVIAGEAQCHFPPEHAPPNVPSGSTRKRLTNIPRSKKYVAGNYF 572
BLAST of NO01G01900 vs. NCBI_GenBank
Match: WP_000910894.1 (cAMP/cGMP-dependent 3',5'-cyclic-AMP/GMP phosphodiesterase [Leptospira interrogans]) HSP 1 Score: 68.6 bits (166), Expect = 2.900e-8 Identity = 42/149 (28.19%), Postives = 81/149 (54.36%), Query Frame = 0 Query: 5 HVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDV 154 H++ +P G+KLK+A G++NTL + P+ +A ++L ++ I + QA+ +L I ++RY G+ ++ KG+ FY+++ G ++ + L+++E + +KR + +YFGEA+ + P +V A TDV Sbjct: 425 HIARKDMPTGTKLKLAKFGIENTLYPEITPPKHIEAYNLLDVLTQIDIFHGFPIEQAKEILLIVNEERYKRGDQIIRKGTPGDKFYIIASGNVK-------FEGLNQDETGQGPIKR--YGTYEYFGEASL--VLDLPRAADVYAETDV 562
BLAST of NO01G01900 vs. NCBI_GenBank
Match: XP_008613275.1 (hypothetical protein SDRG_09139 [Saprolegnia diclina VS20] >EQC33152.1 hypothetical protein SDRG_09139 [Saprolegnia diclina VS20]) HSP 1 Score: 68.6 bits (166), Expect = 2.900e-8 Identity = 45/134 (33.58%), Postives = 68/134 (50.75%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYP----RDDLDDLDEEENTEEKVKRVHWSMGDYF 131 +++VH + +P S L+ AP GV+NT+ VP + PE + VL LV I DLTL A L+++ + YA V GS +FY++ G + +P R D D + +T + KR + GDYF Sbjct: 431 IFVVHTAAKDIPADSGLRPAPEGVQNTIIVPTERPESASTLEVLDLVRKIDIFVDLTLADAYELVQMARRVDYAKAATVQEHGSIARSFYIVVAGEAQAVFPPLGARTDTSD-RKRLSTIPQSKR--YIPGDYF 561
BLAST of NO01G01900 vs. NCBI_GenBank
Match: KRX00899.1 (Cyclic nucleotide-binding protein [Pseudocohnilembus persalinus]) HSP 1 Score: 68.2 bits (165), Expect = 3.700e-8 Identity = 46/192 (23.96%), Postives = 98/192 (51.04%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEV-PVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDVELIVFAGSELRHLLADGPSVSRGLLQCRYFSSSSSLSF 192 +YL+H+++ + K S LK+ +GV+NT+ + P + + + L+ +I + LT+ LL+ ++Y G+++V +G+ FY++ G+ + +++EN E+ ++S+GDYFGE++ V+A+TD+ L+ ++ + DG G + ++++ S+S F Sbjct: 573 LYLIHIAQKDLLKNSGLKIVGMGVENTIIILPSNGVKNIDLKRRMELLSNIDIMQSLTIKNINWLLDSIVVEKYFPGDLIVEEGNLGDKFYIIESGVARIF--------SNKKENQFER----YFSVGDYFGESSLLQNQLLKRQASVQAVTDMVLLTLKRNDFWFVFGDGMD-GPGKIIMKFYNLSNSRQF 751 The following BLAST results are available for this feature:
BLAST of NO01G01900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01900 ID=NO01G01900|Name=NO01G01900|organism=Nannochloropsis oceanica|type=gene|length=663bpback to top protein sequence of NO01G01900.1 >NO01G01900.1-protein ID=NO01G01900.1-protein|Name=NO01G01900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=221bpback to top Synonyms
Publications
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