NO01G01900, NO01G01900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01900 vs. NCBI_GenBank
Match: XP_003290682.1 (hypothetical protein DICPUDRAFT_98774 [Dictyostelium purpureum] >EGC32794.1 hypothetical protein DICPUDRAFT_98774 [Dictyostelium purpureum]) HSP 1 Score: 89.4 bits (220), Expect = 1.600e-14 Identity = 50/158 (31.65%), Postives = 89/158 (56.33%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDVELIVF 159 +YLVH+SE +P+GS LK+A GV++TL + V +A+ +L L+E + + L QA +L+ K++Y+ G +++ + + P FY+++ G++ VT + DL + + +GDYFGE + + T V+A+TDVE++ F Sbjct: 491 LYLVHISEHTLPQGSGLKIAKEGVQHTLSLDVIRSSHSEAVDILKLIESVDIFRSIPLTQACEILQTATKRKYSQGSLIIARDTEPDAFYIIASGVVCVT-----IGDL-----------KKNLIVGDYFGEMSL--VMGTLRSANVQAVTDVEVLSF 630
BLAST of NO01G01900 vs. NCBI_GenBank
Match: XP_644314.1 (cGMP-stimulated cGMP phosphodiesterase [Dictyostelium discoideum AX4] >Q8MLZ3.1 RecName: Full=cGMP-dependent 3',5'-cGMP phosphodiesterase A; AltName: Full=Cyclic GMP-binding protein A; AltName: Full=Phosphodiesterase 5; Short=DdPDE5; AltName: Full=Phosphodiesterase D >AAM34039.1 cGMP-stimulated cGMP-specific phosphodiesterase [Dictyostelium discoideum] >AAL06059.1 cGMP-stimulated cGMP phosphodiesterase [Dictyostelium discoideum] >EAL70084.1 cGMP-stimulated cGMP phosphodiesterase [Dictyostelium discoideum AX4]) HSP 1 Score: 85.1 bits (209), Expect = 2.900e-13 Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDVELIVF 159 +YLVH+SE +P GS LK+A GV +TL + V +A+ +L LVE + + L QA +L+ K++Y+ G V++ + + P FYV++ G++ V N E K + +GDYFGE + + V+A+TDVE++ F Sbjct: 556 LYLVHISEHTLPAGSGLKIAKEGVAHTLSLDVMKSSHSEAVDILKLVESVDIFRSIPLTQACEILQTATKRKYSQGSVIIARDTEPDAFYVVASGVVCV--------------NIGELKKNL--IVGDYFGEMSL--VMGGLRSANVQAVTDVEVLSF 695
BLAST of NO01G01900 vs. NCBI_GenBank
Match: XP_020437738.1 (cGMP-stimulated cGMP phosphodiesterase [Heterostelium album PN500] >EFA85631.1 cGMP-stimulated cGMP phosphodiesterase [Heterostelium album PN500]) HSP 1 Score: 82.8 bits (203), Expect = 1.500e-12 Identity = 49/159 (30.82%), Postives = 84/159 (52.83%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDVELIVFA 160 +YLVH+SE ++P S LK+A GV +TL + V+ +A+ +L L+E + + L Q +L +K Y G V++ + + P F+V++ G+++V+ D E+N GDYFGE + + +V A+TDVE++VF+ Sbjct: 653 LYLVHISEHSLPTSSGLKIAREGVNHTLRLDVEKQTHSEAVDILKLMESVDIFRSIPLSQVAEILRTANRKTYPQGSVIIAQHTEPDAFFVVASGIVKVSV-------ADLEKNL---------IAGDYFGEMSL--IMGGLRSAKVSAVTDVEVLVFS 793
BLAST of NO01G01900 vs. NCBI_GenBank
Match: XP_012749793.1 (hypothetical protein SAMD00019534_105010 [Acytostelium subglobosum LB1] >GAM27326.1 hypothetical protein SAMD00019534_105010 [Acytostelium subglobosum LB1]) HSP 1 Score: 82.8 bits (203), Expect = 1.500e-12 Identity = 49/159 (30.82%), Postives = 87/159 (54.72%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDVELIVFA 160 +YLVH+SE ++P S LK+A GV++TL + V+ +A+ +L L+E + + L QA +L +K Y G V++ + S P F+V++ G+++V+ + DL++ + GDYFGE + + +V A+TDV ++VF+ Sbjct: 447 LYLVHISEQSLPADSGLKIAHEGVRHTLRLDVEKHMHSEAVDILKLMESVDIFRSIPLSQAAEILRTATRKTYPQGSVIIAQDSEPDAFFVVASGIVKVS-----VGDLEK-----------NLIAGDYFGEMSL--IMGGRRSAKVSAVTDVGVLVFS 587
BLAST of NO01G01900 vs. NCBI_GenBank
Match: OIP22577.1 (hypothetical protein AUK22_10470, partial [bacterium CG2_30_54_10]) HSP 1 Score: 79.0 bits (193), Expect = 2.100e-11 Identity = 49/157 (31.21%), Postives = 84/157 (53.50%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDVELIV 158 +YL+HVSE A+P GS+L+ AP G T+ +PV P +A+ L ++ I + L + +AR L + +R+A G+VV+ KG+ F+++ G + RDD K+K ++ DY GE + + P + +V A TD++++V Sbjct: 197 LYLIHVSEKAIPPGSRLRKAPDGPDETIVIPVQPPLTNEALEYLDVLNHIDLFSGLPIEKAREFLTLVKTERFAGGDVVIKKGTVGDRFFMIVNGRANIV--RDD-----------HKIK--VYANNDYIGETSM--ILNVPRNADVVAETDLKVLV 336
BLAST of NO01G01900 vs. NCBI_GenBank
Match: KYQ93933.1 (cGMP-stimulated cGMP phosphodiesterase [Tieghemostelium lacteum]) HSP 1 Score: 78.2 bits (191), Expect = 3.600e-11 Identity = 49/158 (31.01%), Postives = 83/158 (52.53%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDVELIVF 159 +YLVH+SE ++P S LK+A GV +TL + V +AI +L L++ + + L QA +L +KRY V++ + S P F+V++ G+++V+ VK+ + +GDYFGE + + V A+T+VE++VF Sbjct: 494 LYLVHISEHSLPVNSGLKIAKEGVDSTLRLDVARQSHSEAIDILKLMDSVDIFRIMPLSQACDILRTATRKRYPQDSVIIAQDSEPDAFFVVASGVVQVSI---------------GSVKK-NLIVGDYFGEMSL--VMGGKRSAMVTAVTEVEVLVF 633
BLAST of NO01G01900 vs. NCBI_GenBank
Match: OQS00888.1 (cGMP-dependent 3',5'-cGMP phosphodiesterase [Achlya hypogyna]) HSP 1 Score: 77.0 bits (188), Expect = 8.000e-11 Identity = 45/167 (26.95%), Postives = 75/167 (44.91%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDVELIVFAGSELRHLL 168 +Y+VH + +P S L+ AP GV+NT+ VP + PE + VL LV I DLTL A L+++ + Y+ V G+ FY++ G + +P D + + K + GDYF G+ + + T + L+ F +++ L Sbjct: 422 IYVVHTAAKDIPADSGLRAAPEGVQNTIIVPTERPESASTLEVLDLVRKIDIFVDLTLSDAYELIQMARRHTYSKSTTVQEAGAAAGTFYIIIAGEAQAIFPSGSRTDTCDRKRLSTVPKSKRYIPGDYFDLQYLLTPNMAAGYSVIASST-LSLLEFNAADINWFL 587
BLAST of NO01G01900 vs. NCBI_GenBank
Match: OQY29159.1 (hypothetical protein B6244_04800 [Candidatus Cloacimonetes bacterium 4572_55]) HSP 1 Score: 75.9 bits (185), Expect = 1.800e-10 Identity = 55/229 (24.02%), Postives = 106/229 (46.29%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDVELIVFAGSELRHLLADGPSV---------SRGLLQCRYFSSSSSLSF--PSSSMRLELLLTF-DYTLNSLALKSSN 218 +Y+VHV + P+G LK+AP ++N L +PV P F + VL + I F++D + + +L +K + AGEV++ + F+++ G +E+ +L + + DY+GE A ++ P +V A TDVE++ ++ +G V +R L C SS F P+ +++ ++++ Y+ S+ ++S + Sbjct: 426 VYVVHVGKQNFPEGCGLKLAPDSIENYLSIPVKTPRFHEGSQVLRTLSKIDFMSDFPVSKLIDILPSLKRKNFEAGEVIMRQNEVGNEFHIIVYGKVEIIRDNKNL---------------ITYGQNDYYGE--MATISGEPRSADVLAKTDVEVLAI-NEKIFLAFIEGTHVVEYLKKLERTRRLDSCALLESSPVFGFLTPTQITQMQAMMSYVSYSKESVLIESGH 636
BLAST of NO01G01900 vs. NCBI_GenBank
Match: OHD16385.1 (hypothetical protein A2Y37_03850 [Spirochaetes bacterium GWB1_60_80] >OHD28769.1 hypothetical protein A2004_09215 [Spirochaetes bacterium GWC1_61_12] >OHD43412.1 hypothetical protein A2087_02640 [Spirochaetes bacterium GWD1_61_31] >OHD46599.1 hypothetical protein A2Y35_14840 [Spirochaetes bacterium GWE1_60_18] >OHD61033.1 hypothetical protein A2Y32_05115 [Spirochaetes bacterium GWF1_60_12]) HSP 1 Score: 72.8 bits (177), Expect = 1.500e-9 Identity = 52/191 (27.23%), Postives = 97/191 (50.79%), Query Frame = 0 Query: 5 HVSEGAVPKGSKLKVAPVGVKNTLEVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDVELIVFAGSELRHLLADGPSVSRGLLQCRYFSSSSSLSFPSSS 196 H++E PK +KL +A G+++TL+ V P+F K +L L++ + F D+ + +A+ + I ++ Y G++++ K S FY++ +G + VT DL E K+++ S DYFGE A +T + +V A TDV L + + ++ G + L++ +S + + S+S Sbjct: 421 HIAEKDFPKDTKLTLARFGIEHTLQFKVRQPDFEKDYQILGLLKHLDFFQDINIGKAQEFITIVQEEHYRKGQLIIKKDSPGDKFYIIYMGNVSVTG-----HDLAE--------KKIYGSF-DYFGEVAL--VTQSRRAADVYAETDVVLYTIERDKFLNFIS-GTEFEKMLVRLARIRNSETWNLLSNS 594
BLAST of NO01G01900 vs. NCBI_GenBank
Match: XP_001449692.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK82295.1 unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 72.0 bits (175), Expect = 2.600e-9 Identity = 54/175 (30.86%), Postives = 85/175 (48.57%), Query Frame = 0 Query: 1 MYLVHVSEGAVPKGSKLKVAPVGVKNTL-----EVPVDVPEFRKAISVLSLVEDIHFLADLTLPQARGLLEIGYKKRYAAGEVVVPKGSRPTNFYVLSIGLLEVTYPRDDLDDLDEEENTEEKVKRVHWSMGDYFGEAAFAPLTATPGHDEVRALTDVELIVFAGSELRHLLADG 171 MYLVHV+ V KGS LKVA G++NTL V D+P RK + ++ I LTL A+ L++ ++Y GE+V+ + FY++ GL +V D++EN ++ + GDYFGE+A + V A+TD+ ++ + + DG Sbjct: 524 MYLVHVAAKDVLKGSGLKVAKPGIENTLILIRPNVQQDIPLNRK----MDIISRIDIFDKLTLNNAKFLMDALKLEKYKEGELVIQENQEGHKFYIIESGLAKVF--------SDQKENKFQR----YLQSGDYFGESAL--IQTGRRRASVLAVTDLRVLSLDKHDFWFIFGDG 680 The following BLAST results are available for this feature:
BLAST of NO01G01900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01900 ID=NO01G01900|Name=NO01G01900|organism=Nannochloropsis oceanica|type=gene|length=663bpback to top protein sequence of NO01G01900.1 >NO01G01900.1-protein ID=NO01G01900.1-protein|Name=NO01G01900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=221bpback to top Synonyms
Publications
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