NO01G01860, NO01G01860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01860 vs. NCBI_GenBank
Match: KXZ48970.1 (hypothetical protein GPECTOR_24g260 [Gonium pectorale]) HSP 1 Score: 104.4 bits (259), Expect = 4.100e-19 Identity = 58/133 (43.61%), Postives = 78/133 (58.65%), Query Frame = 0 Query: 9 VVLNIYELTDEKGSGSWMRRVGLGTWHTGVEVGGVEYT-----FAQNGIFFHVPRMPIVATGQVITLKESMPMGEHVGSANEVHGIINELREEFGPNAYNITNRNCNHFSDALCKTLVGASIPAWVNRPAKIA 137 V LNIY+L SW G+G +H+GVEV GVEY F +G+F PR A GQV+ +ES+PMGE S E+H ++ + E+ N+Y++ RNCNHF+ LC+ LVG P W+NR A IA Sbjct: 4 VTLNIYDLA---AHNSWTYWCGVGIFHSGVEVYGVEYAYGGHDFDYSGVFATNPR---DAPGQVV-YRESIPMGETNLSQQEIHQLVQRMGNEYKGNSYHLLQRNCNHFASDLCRQLVGREAPTWINRLAGIA 129
BLAST of NO01G01860 vs. NCBI_GenBank
Match: XP_009036405.1 (hypothetical protein AURANDRAFT_15620, partial [Aureococcus anophagefferens] >EGB09308.1 hypothetical protein AURANDRAFT_15620, partial [Aureococcus anophagefferens]) HSP 1 Score: 101.7 bits (252), Expect = 2.700e-18 Identity = 54/129 (41.86%), Postives = 76/129 (58.91%), Query Frame = 0 Query: 9 VVLNIYEL--TDEKGSG--SWMRRVGLGTWHTGVEVGGVEYTFAQNGIFFHVPRMPIVATGQVITLKESMPMGEHVGSANEVHGIINELREEFGPNAYNITNRNCNHFSDALCKTLVGASIPAWVNRPA 134 V L++Y+ T + S SW++ LG H+GVE+ G EY+F G+F P+ L ES+ +G HVGS N+ +G++N+LR F P +Y +T+RNCNHFSDA + L IPA VNR A Sbjct: 1 VTLHVYDFVATGSRTSAALSWLQ---LGLHHSGVEINGSEYSFNDGGVFKAPPQACSRGAAPQCVLVESLHLGAHVGSVNDFNGVLNDLRRAFPPGSYALTSRNCNHFSDAFVRALGLGGIPARVNRAA 126
BLAST of NO01G01860 vs. NCBI_GenBank
Match: GAX19379.1 (hypothetical protein FisN_4Lh358 [Fistulifera solaris]) HSP 1 Score: 100.9 bits (250), Expect = 4.600e-18 Identity = 53/132 (40.15%), Postives = 80/132 (60.61%), Query Frame = 0 Query: 8 EVVLNIYELTDEKGSGSWMRRVGLGTWHTGVEVGGVEYTFAQNGIFFHVPRMPIVATGQVITLKESMPMGEHVGSANEVHGIINELREEFGPNAYNITNRNCNHFSDALCKTLVGASIPAWVNRPAKIASVF 140 +V+LNIY+L + S + +G G +H+GVE+ G EY+FA GIF P+ T +E + +G G +E++ ++ LR+EFGP+ Y+ RNCNHFS+ALC LV +IP +VNR A++ F Sbjct: 15 KVLLNIYDLHPQNES---LHGLGFGIYHSGVEISGTEYSFANGGIFEIPPK-----TAPGAKFREQVEVGLFEGGKDELNRALDLLRDEFGPDDYDGFRRNCNHFSNALCWRLVHKTIPPYVNRAAELLVCF 138
BLAST of NO01G01860 vs. NCBI_GenBank
Match: GAX28451.1 (hypothetical protein FisN_4Hh358 [Fistulifera solaris]) HSP 1 Score: 100.5 bits (249), Expect = 6.000e-18 Identity = 52/128 (40.62%), Postives = 78/128 (60.94%), Query Frame = 0 Query: 8 EVVLNIYELTDEKGSGSWMRRVGLGTWHTGVEVGGVEYTFAQNGIFFHVPRMPIVATGQVITLKESMPMGEHVGSANEVHGIINELREEFGPNAYNITNRNCNHFSDALCKTLVGASIPAWVNRPAKI 136 +V+LNIY+L + + + VG G +H+GVE+ G EY+FA GIF P+ T +E + +G G +E++ ++ LR+EFGP+ Y+ RNCNHFS+ALC LV IP +VNR A++ Sbjct: 15 KVLLNIYDLHPQNET---LHGVGFGIYHSGVEISGTEYSFANGGIFEIPPK-----TAPGAKFREQVEIGHFEGGMDELNRALDFLRDEFGPDDYDGFRRNCNHFSNALCWRLVHKKIPPYVNRAAEL 134
BLAST of NO01G01860 vs. NCBI_GenBank
Match: PAN25461.1 (hypothetical protein PAHAL_F02352 [Panicum hallii]) HSP 1 Score: 100.5 bits (249), Expect = 6.000e-18 Identity = 67/172 (38.95%), Postives = 93/172 (54.07%), Query Frame = 0 Query: 9 VVLNIYELTDEKGSGSWMRRVGLGTWHTGVEVGGVEYTF-----AQNGIFFHVPRMPIVATGQVITLKESMPMGEHVGSANEVHGIINELREEFGPNAYNITNRNCNHFSDALCKTLVG-ASIPAWVNRPAKIASVFSIGVFGGRNKKEKEGEKEGGGVTKAEKAAAGKRKK 175 V LN+Y++T G W+ GLG +H+GV+V GVEY + +GIF VPR G +ES+ +G + EV ++ EL +F +AYN+ +RNCNHF DA C+ LV A IP WVNR AKI VF+ + G ++GE+ AAAG R + Sbjct: 31 VFLNVYDVTPANGYARWL---GLGVYHSGVQVHGVEYAYGAHDGTSSGIFEVVPRR---CPG--YAFRESVLVGTTELTRAEVRALMAELAADFPGDAYNLVSRNCNHFCDAACRRLVARARIPRWVNRLAKIGVVFTCVIPGNGRAVRRKGERPSA-------AAAGIRSR 187
BLAST of NO01G01860 vs. NCBI_GenBank
Match: PUZ61917.1 (hypothetical protein GQ55_4G316400 [Panicum hallii var. hallii]) HSP 1 Score: 100.5 bits (249), Expect = 6.000e-18 Identity = 67/172 (38.95%), Postives = 93/172 (54.07%), Query Frame = 0 Query: 9 VVLNIYELTDEKGSGSWMRRVGLGTWHTGVEVGGVEYTF-----AQNGIFFHVPRMPIVATGQVITLKESMPMGEHVGSANEVHGIINELREEFGPNAYNITNRNCNHFSDALCKTLVG-ASIPAWVNRPAKIASVFSIGVFGGRNKKEKEGEKEGGGVTKAEKAAAGKRKK 175 V LN+Y++T G W+ GLG +H+GV+V GVEY + +GIF VPR G +ES+ +G + EV ++ EL +F +AYN+ +RNCNHF DA C+ LV A IP WVNR AKI VF+ + G ++GE+ AAAG R + Sbjct: 31 VFLNVYDVTPANGYARWL---GLGVYHSGVQVHGVEYAYGAHDGTSSGIFEVVPRR---CPG--YAFRESVLVGTTELTRAEVRALMAELAADFPGDAYNLVSRNCNHFCDAACRRLVARARIPRWVNRLAKIGVVFTCVIPGNGRAVRRKGERPSA-------AAAGIRSR 187
BLAST of NO01G01860 vs. NCBI_GenBank
Match: XP_019454674.1 (PREDICTED: deSI-like protein At4g17486 [Lupinus angustifolius] >OIW04955.1 hypothetical protein TanjilG_01151 [Lupinus angustifolius]) HSP 1 Score: 100.1 bits (248), Expect = 7.800e-18 Identity = 57/145 (39.31%), Postives = 79/145 (54.48%), Query Frame = 0 Query: 1 MAASSCREVVLNIYELTDEKGSGSWMRRVGLGTWHTGVEVGGVEYTFA-----QNGIFFHVPRMPIVATGQVITLKESMPMGEHVGSANEVHGIINELREEFGPNAYNITNRNCNHFSDALCKTLVGASIPAWVNRPAKIASVFS 141 +A S V LN+Y+LT G W VGLG +H+GV+V GVEY F GIF P+ Q ++++ +G+ EV G++ EL E+ NAYN+ +NCNHF +A C L G IP WVNR A+I +F+ Sbjct: 12 VAGSGSVPVYLNVYDLTTINGYAYW---VGLGVYHSGVQVHGVEYAFGAHDYPSTGIFEGEPK-----RCQGFRFRKAIMIGKTDMEPVEVKGVMEELANEYRGNAYNLITKNCNHFCNAACVKLTGNPIPNWVNRLARIGFLFN 148
BLAST of NO01G01860 vs. NCBI_GenBank
Match: KJB56553.1 (hypothetical protein B456_009G124800 [Gossypium raimondii]) HSP 1 Score: 99.8 bits (247), Expect = 1.000e-17 Identity = 60/149 (40.27%), Postives = 82/149 (55.03%), Query Frame = 0 Query: 4 SSCRE-----VVLNIYELTDEKGSGSWMRRVGLGTWHTGVEVGGVEYTFAQN-----GIFFHVPRMPIVATGQVITLKESMPMGEHVGSANEVHGIINELREEFGPNAYNITNRNCNHFSDALCKTLVGASIPAWVNRPAKIA-SVFSI 142 SSC E V LN+Y+LT G W GLG +H+GV+V GVEY F + GIF P+ T ++S+ +G+ +V G++ +L EE+ NAYN+ +NCNHF + C L G IP+WVNR A+I S FSI Sbjct: 7 SSCEETGSVPVYLNVYDLTPINGYAYWF---GLGVYHSGVQVHGVEYAFGAHEYPTTGIFEAEPKQ-----CDGFTFRKSILIGKTELGPADVRGVMEDLAEEYKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRLARIGNSAFSI 147
BLAST of NO01G01860 vs. NCBI_GenBank
Match: XP_002057987.1 (uncharacterized protein Dvir_GJ15744 [Drosophila virilis] >EDW66095.1 uncharacterized protein Dvir_GJ15744 [Drosophila virilis]) HSP 1 Score: 99.4 bits (246), Expect = 1.300e-17 Identity = 51/137 (37.23%), Postives = 80/137 (58.39%), Query Frame = 0 Query: 2 AASSCREVVLNIYELTDEKGSGSWMRRVGLGTWHTGVEVGGVEYTF-----AQNGIFFHVPRMPIVATGQVITLKESMPMGEHVGSANEVHGIINELREEFGPNAYNITNRNCNHFSDALCKTLVGASIPAWVNRPA 134 A SS V++N+Y+L ++ +GLG +HTGV+V G EYT+ + GIF PR G+ ++S+ +G + +EVH I+ +L +F N+Y++TN NCNHF+D++ + L G IP W+NR A Sbjct: 29 AGSSKEPVIINVYDLF---SINEYVVPLGLGIFHTGVQVYGTEYTYGGHSLSNTGIFEMPPRSAEQELGEHFHYRQSIQLGHTHFTRDEVHRIVEQLGWQFTGNSYHLTNNNCNHFTDSMARILCGRQIPGWINRLA 162
BLAST of NO01G01860 vs. NCBI_GenBank
Match: EEC80134.1 (hypothetical protein OsI_21921 [Oryza sativa Indica Group]) HSP 1 Score: 99.4 bits (246), Expect = 1.300e-17 Identity = 62/169 (36.69%), Postives = 90/169 (53.25%), Query Frame = 0 Query: 9 VVLNIYELTDEKGSGSWMRRVGLGTWHTGVEVGGVEYTF-----AQNGIFFHVPRMPIVATGQVITLKESMPMGEHVGSANEVHGIINELREEFGPNAYNITNRNCNHFSDALCKTLVGASIPAWVNRPAKIASVFSIGVFGGRNKKEKEGEKEGGGVTKAEKAAAGKR 173 V LN+Y++T G W+ GLG +H+GV+V GVEY + A +GIF PR G +E++ +G + EV ++ +L +F +AYN+ +RNCNHF DA C+ LV A IP WVNR AKI VF+ + G ++G+ KA+ R Sbjct: 52 VYLNVYDVTPANGYARWL---GLGVYHSGVQVHGVEYAYGAHDGAGSGIFEVAPRR---CPG--YAFREAILVGTTELTRAEVRAVMADLAADFPGDAYNLVSRNCNHFCDAACRRLVRARIPRWVNRLAKIGVVFTCVIPGNGAAVRRKGDPPATATAPGGKASIRSR 212 The following BLAST results are available for this feature:
BLAST of NO01G01860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01860 ID=NO01G01860|Name=NO01G01860|organism=Nannochloropsis oceanica|type=gene|length=3224bpback to top protein sequence of NO01G01860.1 >NO01G01860.1-protein ID=NO01G01860.1-protein|Name=NO01G01860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=195bpback to top protein sequence of NO01G01860.2 >NO01G01860.2-protein ID=NO01G01860.2-protein|Name=NO01G01860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=251bpback to top Synonyms
Publications
|