NO01G01780, NO01G01780 (gene) Nannochloropsis oceanica

Overview
NameNO01G01780
Unique NameNO01G01780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1688
Alignment locationchr1:452041..453728 +

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Properties
Property NameValue
DescriptionTrna rrna methyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:452041..453728 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008173RNA methyltransferase activity
GO:0003723RNA binding
GO:0016740transferase activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR029028Alpha/beta_knot_MTases
IPR004384rRNA_MeTrfase_TrmH_1
IPR001537SpoU_MeTrfase
Homology
BLAST of NO01G01780 vs. NCBI_GenBank
Match: EWM29087.1 (trna rrna methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 307.4 bits (786), Expect = 7.100e-80
Identity = 166/222 (74.77%), Postives = 184/222 (82.88%), Query Frame = 0
Query:   23 LSLLLILLLT---TGAAKAFVTPSNPSVAP-ARVQPHRLTRMSSADRSVRQPKKTIAFEAALKDKGAPAVILVRPYLDENIGSCARAMLNFGLTDLRIINPFCDHLTPMARARASGADAILEAARIFPDVGAAVSDLSEVIGTSARQRDMTVTIVTPEEAARLAVGSLESFAQGGARTGYMFGSERNGLINEDLVYATRLLQIPTNTAFSSLNLGQAVQICG 241
            +SL+L L L     G   A    S P + P    +  R   MSS DRSVRQPKKTIA+EAALKD+GAPAVILVRPYLDEN+GSCARAMLNFGLTDLRII+PFCDHLTPMARARASGAD +LE AR+F  +  AV+DLSEVIGTSARQRDMT+TIV+PEEAARLAVG+L +FA+GGAR GYMFGSERNGL NEDLVYA R+LQIPTN AFSSLNLGQAVQICG
Sbjct:    9 VSLILHLHLAKVGRGFMMALWDTSTPKIDPNYHSRSLRAMTMSSTDRSVRQPKKTIAYEAALKDRGAPAVILVRPYLDENVGSCARAMLNFGLTDLRIIDPFCDHLTPMARARASGADNVLEGARVFRGLDEAVADLSEVIGTSARQRDMTITIVSPEEAARLAVGTLANFARGGARAGYMFGSERNGLTNEDLVYADRILQIPTNPAFSSLNLGQAVQICG 230          
BLAST of NO01G01780 vs. NCBI_GenBank
Match: WP_012974994.1 (RNA methyltransferase [Azospirillum lipoferum] >BAI73070.1 tRNA/rRNA methyltransferase [Azospirillum sp. B510])

HSP 1 Score: 176.4 bits (446), Expect = 1.900e-40
Identity = 106/249 (42.57%), Postives = 138/249 (55.42%), Query Frame = 0
Query:   84 GAPAVILVRPYLDENIGSCARAMLNFGLTDLRIINPFCDHLTPMARARASGADAILEAARIFPDVGAAVSDLSEVIGTSARQRDMTVTIVTPEEAARLAVGSLESFAQGGARTGYMFGSERNGLINEDLVYATRLLQIPTNTAFSSLNLGQAVQICGYEYWKARAHLGDN-LYTYKEATLSLAKGTRLATTGEVDGVWKRIQDMLDATELNPDPHVRRGLYDRLKSWLLRSRPDVRDVNALHGAVSTVV 332
            G PAVILV+P L ENIG+CARAMLN GLTDLR++ P      P A A ASGAD ++E ARIF     AV+DL  V  T+ R RDM    VTP    R+A G +      G + G MFG ER GL+N+DL  A  L+ +P N AFSSLNL QAV + GYE+++A     D  L+T +         TR AT  E    ++R++  LD T        R  +   L++   R     ++V   HG V+ +V
Sbjct:   14 GGPAVILVQPQLGENIGACARAMLNCGLTDLRLVKPRDGWPNPKANAAASGADPVIENARIFETTAEAVADLEAVFATTVRTRDMIQRFVTP----RVAAGEMRERYAAGQKLGVMFGPERTGLVNDDLTLAQTLVTVPLNPAFSSLNLAQAVLLIGYEWFQAGDRTPDRFLHTGQ---------TRPATMAERVNFFERLEAALDRTGFFTSEEKRPSMVRTLRNAFERMEMTEQEVRTFHGVVAALV 249          
BLAST of NO01G01780 vs. NCBI_GenBank
Match: WP_085090169.1 (RNA methyltransferase [Azospirillum oryzae] >SMF82770.1 tRNA/rRNA methyltransferase [Azospirillum oryzae])

HSP 1 Score: 175.3 bits (443), Expect = 4.200e-40
Identity = 104/249 (41.77%), Postives = 139/249 (55.82%), Query Frame = 0
Query:   84 GAPAVILVRPYLDENIGSCARAMLNFGLTDLRIINPFCDHLTPMARARASGADAILEAARIFPDVGAAVSDLSEVIGTSARQRDMTVTIVTPEEAARLAVGSLESFAQGGARTGYMFGSERNGLINEDLVYATRLLQIPTNTAFSSLNLGQAVQICGYEYWKARAHLGDN-LYTYKEATLSLAKGTRLATTGEVDGVWKRIQDMLDATELNPDPHVRRGLYDRLKSWLLRSRPDVRDVNALHGAVSTVV 332
            G PAVILV+P L ENIG+CARAMLN GLTDLR++ P      P A A ASGAD +++ A+IF     AV+DL  V  T+ R RDM    VTP    R+A G +      G + G MFG ER GL+N+DL +A  L+ +P N AFSSLNL QAV + GYE+++A     D  L+T +         TR AT  E    ++R++  LD T        R  +   L++   R     ++V   HG V+ +V
Sbjct:   14 GGPAVILVQPQLGENIGACARAMLNCGLTDLRLVKPRDGWPNPKASAAASGADLVIDNAKIFETTAEAVADLEAVYATTVRTRDMIQRFVTP----RVAAGEMRERYAAGQKVGVMFGPERTGLVNDDLTFAQTLVTVPLNPAFSSLNLAQAVLLIGYEWFQAGDRTPDRFLHTGQ---------TRPATMAERVNFFERLEAALDRTGFFTSEEKRPSMVRTLRNAFERMEMTEQEVRTFHGVVAALV 249          
BLAST of NO01G01780 vs. NCBI_GenBank
Match: WP_014248706.1 (RNA methyltransferase [Azospirillum lipoferum] >CBS87722.1 putative tRNA/rRNA methyltransferase [Azospirillum lipoferum 4B])

HSP 1 Score: 174.9 bits (442), Expect = 5.500e-40
Identity = 104/249 (41.77%), Postives = 139/249 (55.82%), Query Frame = 0
Query:   84 GAPAVILVRPYLDENIGSCARAMLNFGLTDLRIINPFCDHLTPMARARASGADAILEAARIFPDVGAAVSDLSEVIGTSARQRDMTVTIVTPEEAARLAVGSLESFAQGGARTGYMFGSERNGLINEDLVYATRLLQIPTNTAFSSLNLGQAVQICGYEYWKARAHLGDN-LYTYKEATLSLAKGTRLATTGEVDGVWKRIQDMLDATELNPDPHVRRGLYDRLKSWLLRSRPDVRDVNALHGAVSTVV 332
            G PAVILV+P L ENIG+CARAMLN GLTDLR++ P      P A A ASGAD +++ A+IF     AV+DL  V  T+ R RDM    VTP    R+A G +      G + G MFG ER GL+N+DL +A  L+ +P N AFSSLNL QAV + GYE+++A     D  L+T +         TR AT  E    ++R++  LD T        R  +   L++   R     ++V   HG V+ +V
Sbjct:   14 GGPAVILVQPQLGENIGACARAMLNCGLTDLRLVKPRDGWPNPKASAAASGADLVIDNAKIFETTAEAVADLEAVYATTVRTRDMIQRFVTP----RVAAGEMRERYAAGQKVGAMFGPERTGLVNDDLTFAQTLVTVPLNPAFSSLNLAQAVLLIGYEWFQAGDRTPDRFLHTGQ---------TRPATMAERVNFFERLEAALDRTGFFTSEEKRPSMVRTLRNAFERMEMTEQEVRTFHGVVAALV 249          
BLAST of NO01G01780 vs. NCBI_GenBank
Match: WP_045580966.1 (RNA methyltransferase [Azospirillum thiophilum] >KJR65662.1 rRNA methyltransferase [Azospirillum thiophilum] >ALG70671.1 rRNA methyltransferase [Azospirillum thiophilum])

HSP 1 Score: 174.9 bits (442), Expect = 5.500e-40
Identity = 107/254 (42.13%), Postives = 139/254 (54.72%), Query Frame = 0
Query:   84 GAPAVILVRPYLDENIGSCARAMLNFGLTDLRIINPFCDHLTPMARARASGADAILEAARIFPDVGAAVSDLSEVIGTSARQRDMTVTIVTPEEAARLAVGSLESFAQGGARTGYMFGSERNGLINEDLVYATRLLQIPTNTAFSSLNLGQAVQICGYEYWKARAHLGDN-LYTYKEATLSLAKGTRLATTGEVDGVWKRIQDMLDATELNPDPHVRRGLYDRLKSWLLRSRPDVRDVNALHGAVSTVVSKHEK 337
            G PAVILV+P L ENIG+CARAMLN GLTDLR+++P      P A A ASGAD +++ ARIF     AV+DL  V  T+ R RDM    VTP    R+A G +      G + G MFG ER GL N+DL  A  L+ +P N AFSSLNL QAV + GYE+++A     D  L+T           TR AT  E    ++R++  LD T        R  +   L++   R     ++V  LHG V+ + S   K
Sbjct:   14 GGPAVILVQPQLGENIGACARAMLNCGLTDLRLVSPRDGWPNPKATAAASGADIVIDNARIFETTADAVADLEAVYATTVRTRDMIQRFVTP----RVAAGEMRERYAAGQKVGVMFGPERTGLFNDDLTLAQTLVTVPLNPAFSSLNLAQAVLLIGYEWFQAGDRTPDRFLHT---------GPTRPATMAERANFFERLEAALDRTGFFTSEAKRPSMVRTLRNAFERMEMTEQEVRTLHGVVAALTSTRRK 254          
BLAST of NO01G01780 vs. NCBI_GenBank
Match: WP_063635268.1 (RNA methyltransferase [Azospirillum humicireducens] >ANC92202.1 RNA methyltransferase [Azospirillum humicireducens])

HSP 1 Score: 174.9 bits (442), Expect = 5.500e-40
Identity = 104/249 (41.77%), Postives = 139/249 (55.82%), Query Frame = 0
Query:   84 GAPAVILVRPYLDENIGSCARAMLNFGLTDLRIINPFCDHLTPMARARASGADAILEAARIFPDVGAAVSDLSEVIGTSARQRDMTVTIVTPEEAARLAVGSLESFAQGGARTGYMFGSERNGLINEDLVYATRLLQIPTNTAFSSLNLGQAVQICGYEYWKARAHLGDN-LYTYKEATLSLAKGTRLATTGEVDGVWKRIQDMLDATELNPDPHVRRGLYDRLKSWLLRSRPDVRDVNALHGAVSTVV 332
            G PAVILV+P L ENIG+CARAMLN GLTDLR++ P      P A A ASGAD +++ A+IF     AV+DL  V  T+ R RDM    VTP    R+A G +      G + G MFG ER GL+N+DL +A  L+ +P N AFSSLNL QAV + GYE+++A     D  L+T +         TR AT  E    ++R++  LD T        R  +   L++   R     ++V   HG V+ +V
Sbjct:   14 GGPAVILVQPQLGENIGACARAMLNCGLTDLRLVKPRDGWPNPKASAAASGADLVIDNAKIFETTADAVADLEAVYATTVRTRDMIQRFVTP----RVAAGEMRERYAAGQKVGVMFGPERTGLVNDDLTFAQTLVTVPLNPAFSSLNLAQAVLLIGYEWFQAGDRTPDRFLHTGQ---------TRPATMAERVNFFERLEAALDRTGFFTSEEKRPSMVRTLRNAFERMEMTEQEVRTFHGVVAALV 249          
BLAST of NO01G01780 vs. NCBI_GenBank
Match: WP_098739127.1 (RNA methyltransferase [Azospirillum sp. B2] >PGH53033.1 rRNA methyltransferase [Azospirillum sp. B2])

HSP 1 Score: 174.5 bits (441), Expect = 7.200e-40
Identity = 105/249 (42.17%), Postives = 138/249 (55.42%), Query Frame = 0
Query:   84 GAPAVILVRPYLDENIGSCARAMLNFGLTDLRIINPFCDHLTPMARARASGADAILEAARIFPDVGAAVSDLSEVIGTSARQRDMTVTIVTPEEAARLAVGSLESFAQGGARTGYMFGSERNGLINEDLVYATRLLQIPTNTAFSSLNLGQAVQICGYEYWKARAHLGDN-LYTYKEATLSLAKGTRLATTGEVDGVWKRIQDMLDATELNPDPHVRRGLYDRLKSWLLRSRPDVRDVNALHGAVSTVV 332
            G PAVILV+P L ENIG+CARAMLN GLTDLR++ P      P A A ASGAD +++ A+IF     AV+DL  V  T+ R RDM    VTP    R+A G +      G + G MFG ER GL N+DL  A  L+ +P N AFSSLNL QAV + GYE+++A     D  L+T +         TR AT  E    ++R++  LD T        R  +   L++   R     ++V  LHG V+ +V
Sbjct:   14 GGPAVILVQPQLGENIGACARAMLNCGLTDLRLVKPRDGWPNPKANAAASGADLVIDNAKIFETTAEAVADLESVFATTVRTRDMIQRFVTP----RVAAGEMRERYAAGQKVGVMFGPERTGLFNDDLTLAQTLVTVPLNPAFSSLNLAQAVLLIGYEWFQAGDRTPDRFLHTGQ---------TRPATMAERVNFFERLEASLDRTGFFTSEAKRPSMIRTLRNAFERMEMTEQEVRTLHGVVTALV 249          
BLAST of NO01G01780 vs. NCBI_GenBank
Match: WP_042695371.1 (RNA methyltransferase [Azospirillum sp. B506])

HSP 1 Score: 173.7 bits (439), Expect = 1.200e-39
Identity = 104/249 (41.77%), Postives = 137/249 (55.02%), Query Frame = 0
Query:   84 GAPAVILVRPYLDENIGSCARAMLNFGLTDLRIINPFCDHLTPMARARASGADAILEAARIFPDVGAAVSDLSEVIGTSARQRDMTVTIVTPEEAARLAVGSLESFAQGGARTGYMFGSERNGLINEDLVYATRLLQIPTNTAFSSLNLGQAVQICGYEYWKARAHLGDN-LYTYKEATLSLAKGTRLATTGEVDGVWKRIQDMLDATELNPDPHVRRGLYDRLKSWLLRSRPDVRDVNALHGAVSTVV 332
            G PAVILV+P L ENIG+CARAMLN GLTDLR++ P      P A A ASGAD +++ ARIF     AV+DL  V  T+ R RDM    VTP    R+A G +      G + G MFG ER GL N+DL  A  L+ +P N AFSSLNL QAV + GYE+++A     D  L+T +         TR AT  E    ++R++  LD T        R  +   L++   R     ++V   HG V+ ++
Sbjct:   14 GGPAVILVQPQLGENIGACARAMLNCGLTDLRLVKPRDGWPNPKANAAASGADLVIDNARIFETTAEAVADLEAVYATTVRTRDMIQRFVTP----RVAAGEMRERYAAGQKVGVMFGPERTGLFNDDLTLAQTLVTVPLNPAFSSLNLAQAVLLIGYEWFQAGDRTPDRFLHTGQ---------TRPATMAERVNFFERLEAALDRTGFFTSEEKRPSMVRTLRNAFERMEMTEQEVRTFHGVVAALI 249          
BLAST of NO01G01780 vs. NCBI_GenBank
Match: WP_012566192.1 (RNA methyltransferase [Rhodospirillum centenum] >ACI98402.1 RNA methyltransferase, TrmH family, group 1 [Rhodospirillum centenum SW])

HSP 1 Score: 173.3 bits (438), Expect = 1.600e-39
Identity = 96/260 (36.92%), Postives = 145/260 (55.77%), Query Frame = 0
Query:   77 EAALKDKGAPAVILVRPYLDENIGSCARAMLNFGLTDLRIINPFCDHLTPMARARASGADAILEAARIFPDVGAAVSDLSEVIGTSARQRDMTVTIVTPEEAARLAVGSLESFAQGGARTGYMFGSERNGLINEDLVYATRLLQIPTNTAFSSLNLGQAVQICGYEYWKARAHLGDNLYTYKEATLSLAKGTRLATTGEVDGVWKRIQDMLDATELNPDPHVRRGLYDRLKSWLLRSRPDVRDVNALHGAVSTVVSKHEK 337
            +AAL  +G P VILV P + ENIG+CARAMLN GLT+LR++NP        A A ++GA  +L+ AR+F     A++DL +V  T+AR RDM   IVTP  AAR     L +    G R G +FG ER GL+N+D+V +  ++ +P N  FSSLNL QAV +  YE+W   A   +  YT+   +         AT  E+  ++  ++  LD T     P  +  +   +++ L R+    ++V   HG ++ +V + ++
Sbjct:   14 QAALNAQGGPVVILVEPQMGENIGACARAMLNCGLTELRLVNPRDGWPNEKAVAASAGATEVLDRARVFTGTREAIADLHKVYATAARVRDMVKDIVTPRRAAR----DLHAHVAAGRRVGILFGPERTGLVNDDIVLSDTMISVPLNPGFSSLNLAQAVLLVAYEWWMEAAQ-AEEFYTHTGQSPP-------ATKEELHNLFDHLEGELDQTGFYTHPDKKPSMVRNVRNTLQRAHMTEQEVRTFHGIIAALVGRKKQ 261          
BLAST of NO01G01780 vs. NCBI_GenBank
Match: WP_085554964.1 (RNA methyltransferase [Azospirillum lipoferum] >SMH52848.1 tRNA/rRNA methyltransferase [Azospirillum lipoferum])

HSP 1 Score: 172.6 bits (436), Expect = 2.700e-39
Identity = 102/252 (40.48%), Postives = 140/252 (55.56%), Query Frame = 0
Query:   84 GAPAVILVRPYLDENIGSCARAMLNFGLTDLRIINPFCDHLTPMARARASGADAILEAARIFPDVGAAVSDLSEVIGTSARQRDMTVTIVTPEEAARLAVGSLESFAQGGARTGYMFGSERNGLINEDLVYATRLLQIPTNTAFSSLNLGQAVQICGYEYWKARAHLGDNLYTYKEATLSLAKGTRLATTGEVDGVWKRIQDMLDATELNPDPHVRRGLYDRLKSWLLRSRPDVRDVNALHGAVSTVVSKHE 336
            G PA+ILV+P + ENIG+CARAMLN GLTDLR++ P        A A ASGAD +++ AR+F     AV+DL  V  T+AR RDM    VTP    R+A   +      G R G MFG ER GL+N+DL  A  L+ +P N AF+SLNLGQAV + GYE+++     GD      E  L   + TR AT  E+   ++ ++  LD T     P  R  +   L++ L R     ++V   HG ++ +  K +
Sbjct:   14 GGPAIILVQPQMGENIGACARAMLNCGLTDLRLVRPRDGWPNEKAIANASGADLVIDNARVFETTAEAVADLEAVFATTARSRDMIQRFVTP----RVAAEEMRDRHNAGHRVGVMFGPERTGLVNDDLTLAQTLITVPLNPAFASLNLGQAVLLVGYEWFQT----GD---LPPERFLHTGQ-TRPATKAELVNFFEHLEGALDRTGFFTSPEKRPSMVRTLRNALERMDMTEQEVRTFHGVIAALTGKRK 253          
The following BLAST results are available for this feature:
BLAST of NO01G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29087.17.100e-8074.77trna rrna methyltransferase [Nannochloropsis gadit... [more]
WP_012974994.11.900e-4042.57RNA methyltransferase [Azospirillum lipoferum] >BA... [more]
WP_085090169.14.200e-4041.77RNA methyltransferase [Azospirillum oryzae] >SMF82... [more]
WP_014248706.15.500e-4041.77RNA methyltransferase [Azospirillum lipoferum] >CB... [more]
WP_045580966.15.500e-4042.13RNA methyltransferase [Azospirillum thiophilum] >K... [more]
WP_063635268.15.500e-4041.77RNA methyltransferase [Azospirillum humicireducens... [more]
WP_098739127.17.200e-4042.17RNA methyltransferase [Azospirillum sp. B2] >PGH53... [more]
WP_042695371.11.200e-3941.77RNA methyltransferase [Azospirillum sp. B506][more]
WP_012566192.11.600e-3936.92RNA methyltransferase [Rhodospirillum centenum] >A... [more]
WP_085554964.12.700e-3940.48RNA methyltransferase [Azospirillum lipoferum] >SM... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008174NSK008174Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01780.1NO01G01780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576397gene_157Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100024g63gene1513Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01780.1NO01G01780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01780 ID=NO01G01780|Name=NO01G01780|organism=Nannochloropsis oceanica|type=gene|length=1688bp
ACAGGCTAGAACTGCAGCTTACCCACGTGTAGACGTCACAGCGACTTGCC
CGGTCGGAAATGGGGGCTTCCCTACACCATCACCTACGCCCCCTCCCCCT
CTCCCTTCCCAGCCTCCTCCCACCCCTATCACTGCTGCTGATCCTGCTTC
TAACCACAGGCGCGGCCAAAGCATTTGTGACGCCATCGAATCCATCGGTA
GCCCCTGCACGTGTACAGCCACATCGTCTTACAAGAATGAGCTCGGCCGA
CCGCAGTGTGCGACAACCTAAAAAGACAATCGCATTCGAGGCCGCGCTAA
AGGATAAGGGCGCTCCAGCCGTCATACTGGTACGGCCTTACCTCGACGAG
AATATTGGTTCCTGTGCGCGTGCTATGCTCAATTTTGGGCTCACTGACCT
TCGCATCATTAACCCTTTTTGCGACCATTTAACGCCCATGGCACGGGCAC
GGGCATCGGGCGCTGATGCAATATTGGAGGCCGCCCGCATTTTTCCAGAC
GTAGGAGCAGCAGTCTCGGACTTGAGTGAAGTGATCGGCACGAGTGCTCG
GCAACGGGATATGACGGTAACAATTGTCACGCCTGAAGAAGCGGCGCGTC
TGGCGGTAGGTTCCTTGGAGTCTTTCGCACAAGgtatgtacaagacaaat
ctttttctgcactcctgacttctttccaatcatcctccttcctgcctctt
tttcccctcgtctttcctaccgtagGTGGGGCAAGGACAGGCTATATGTT
CGGCTCAGAGCGGAATGGATTGATAAATGAAGATTTGGTGTATGCGACGC
GCCTGCTGCAGATACCGACGAATACTGCGTTTAGCAGTTTGAATCTCGGC
CAGGCTGTGCAGATTTGCGGgtaagtcagtgagtggtagtcgcacgggag
tgtaggcagaggagaaaaagggatcaatttaaagtgaataaaattgatac
atagatatctgatggacccatcatcccccccttctcgtttaattctcttt
accacctaccaccttcccttccttcttcccccccctccaagCTACGAATA
TTGGAAAGCCCGCGCTCACCTCGGTGACAACCTCTACACATACAAAGAAG
CTACATTAAGCCTTGCCAAGGGCACCCGCCTCGCAACCACCGGTGAGGTA
GATGGTGTCTGGAAGAGAATACAAGACATGCTGGACGCAACTGAATTGAA
CCCAGACCCACATGTAAGGAGAGGGTTATATGATAGATTAAAAAGCTGGT
TGCTGAGATCAAGGCCTGATGTGAGGGATGTTAACGCCCTTCACGGCGCT
GTCTCGACGGTTGTTAGCAAGCATGAAAAATTGGAAAATTTGAAAAATGA
GTTGAAGGAAGCGAATGCTAGGGGACGGCAACGGGCGACGACGCCCAGGA
GGGAGAAGGGGGGAGGGAAGGAGGGAGGGAAGGAGAGAGGGAGGGAGGGA
GGGAGAGAGGGAGGTGCGGTGCTTGTGGATGGTGTGGGGGAGGAGGAGAT
AAAGTGGAAAAAGGAGTTGGATAGGGAGAGAATGGCGCAGGAGGAGGATG
GGGGAGAGGGGTGGCAGGATGAGGAGAAGGCAAAGCGCAGAGGATCAGGA
TGGTGAGGGGAAAGGGAAGAAGGGAGGAGAAGGAATCAAATAAGTGAAAT
AAACGACAAAAATGTAGAACTATCGCTGATCACTTTCG
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protein sequence of NO01G01780.1

>NO01G01780.1-protein ID=NO01G01780.1-protein|Name=NO01G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=428bp
MGASLHHHLRPLPLSLPSLLPPLSLLLILLLTTGAAKAFVTPSNPSVAPA
RVQPHRLTRMSSADRSVRQPKKTIAFEAALKDKGAPAVILVRPYLDENIG
SCARAMLNFGLTDLRIINPFCDHLTPMARARASGADAILEAARIFPDVGA
AVSDLSEVIGTSARQRDMTVTIVTPEEAARLAVGSLESFAQGGARTGYMF
GSERNGLINEDLVYATRLLQIPTNTAFSSLNLGQAVQICGYEYWKARAHL
GDNLYTYKEATLSLAKGTRLATTGEVDGVWKRIQDMLDATELNPDPHVRR
GLYDRLKSWLLRSRPDVRDVNALHGAVSTVVSKHEKLENLKNELKEANAR
GRQRATTPRREKGGGKEGGKERGREGGREGGAVLVDGVGEEEIKWKKELD
RERMAQEEDGGEGWQDEEKAKRRGSGW*
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Synonyms
Publications