NO01G01620, NO01G01620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01620 vs. NCBI_GenBank
Match: EWM26828.1 (macrophage mannose receptor 1 [Nannochloropsis gaditana]) HSP 1 Score: 370.5 bits (950), Expect = 2.500e-98 Identity = 366/1537 (23.81%), Postives = 585/1537 (38.06%), Query Frame = 0 Query: 43 TEKVEGCFDRFDSEFAVE---LGRENLSNKRCQAICTDHGYALSATGLSDSCFCGNDYPSVFRRVDTGQCDLPCNPDKASCFAFTCCGSRDERFFTVSWSGEMDILKQLLRQLSHDYRFNSPTFREKIEGDGFCDNVALRLGPSPVNRDNDPTKHDDADSDGEHGRHLHRGKAWMEPDAPPLFLSVGNGCPVGWTLHDCWCYRQHWAEPSTYNEACAKCHAGNAELVTITSEGENNFVQNLHSGCQGWMGIKQQIVVVDEGPGPVRRLALLNEASQQKQLAKSAVDLWSRLSNAGSFSFRDQTALLPSPLPTHIAHNGSVQDFNQGNSQARKRRHHKRAFWDRGAKFHQWANSTKPNAAMLSPLSSFSIKENDVVKTAWVGRFYDVQHQLSTINEDKGTNSSSERNFFDEMAGMEDAKTEDQGVHRIHLSYDKFGFRSIRPAAAGDPTHVPLSHVSSSAREVTVELPPEERLVGIKAVFGVLGLRSLGFYTLALGQNVDSIRLHGPFGNLLHDRPDVFTKDLWLEGMRWHHPIVGFYG-HTDPTTGYVQSLGFYQRLLKDCGWMDGTGNWTAVDCFHVPQNATSFICQKKGWLTH-LGCPDGWLRFSDSCYIRRRLHSVSWWDAWAHCQKKLGGHLVSLDSAADNAFVHSLMGKRGGYIGYHRRRPSEFLMRHRDNRDTFGLEGWIRDTYWNIDATYMHSEHDGVDNWFAGSNSSPYMTSTLSGNKXXXXXXXXXXXXXXXXXCFEMTEDGTWTVVAPSCFAIKS-RAVLCEVGSNDASCSCPSPPLIGHGDGSDHPASTDNNGFYLQFGCSCYR-REVMQNMSWVGAQKMCGSLGGRLVVIDSKEENEWVLAQFQDSMTFNNGFLPGYIGLNNLLNGEEYDWSYYENWQHSPSPSPQPALEPITAKTPLEPTAHVSIITCAQMARDGSWEAKSCDNEERASCFVCKK----PRAATYPAIRPYEDEQWAIEVVEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQGPTSCAYPWCHDCYDAYLKNINTNEYLCVNDQNRLFLSWNRDPAWCLWTIVMHGDSGAVA---------LLTP---HGAGLFYDEQEGGLVVRFLPPVVDVSQQAHPFRKHYNKADQSQPGPQPNV-----------LTPPSDPHPWVNNVFGVDGIACFYSSRPIRPIAWRYLRINILARSRELDQPGVKECSIAVYDQTPHTESFRCWRRPMSGFGADDLVYLEQEALLFFDQSTFAAPRIPLPNGRVRCENQSPTETATCTFAYGQGLTLSRQFRANWGYTISDVVTHRVNTNPEQSALFRVPPPAKRQEKQKWHDDXXXXXXKRLFKRHKHVNEKTEAEPLPRDLTLSISELKEFQNAFSVAYTNFYEILIVKSYVETRNWQLSVPVAPRTSDTIQFWLSSENLRYRWRALFAARGGFTITSGGVPIGDHHSLGDVSYFRDLFFFVFGTYEFPYEAEIIITVNDVPGDGWPLPLPEQSQGDRIRDV 1546 T K EGCF+ F + + G+E+L+N RC+A C G+++SAT + SC CGN+YPSVF RV QC PC+PD+ C CCG ++FTVS++ E+D+ QLLR L+ DYR + F++ +EG +L + T +A DG + GNGCP GW +H CY++ + ++ A A C L + + EN+FV++L +G GW+G+ AKS W + G + + P+ L + G ++F+ D+V + Y V G+ I +SY R AG P+ S++A + L +ER+ ++ LR+L F L N + + +GP+G L + + G I+ YG HTD V +GF + + C +D GNW A+DC + Q+ +++C+++ T + CPDGW+ + +CY + + VSW +A C +LGG L ++DS+ + V LMG + G++G +D G R W G W GSN C M G W + C + S R+V+CE + D C+CPS + F CSCY ++ + +W GA C S RLV + S+EE ++L +T G ++GL + + Y+ W +P P + CA M DGSW + SC ++ +VC++ P A+ + ++ +P + P++ A+ Y+A N + + + +L +S + + T + +S ++A LLT G G+ Y E++ P + + RK N+ D G Q TP S P+ + F +S I P+A + L+I++ A RE + C++ +YD TP+++S+ C++ G LV +E A + D+++ +PR PL NGR RCEN +P ET TC AYG+GLT R+ +G + + +N+ + A S + N F AYTN Y +++SY+ETRNW + VPV+P++ T+QFW+S+ ++ Y W+A+ A+G F I+S G+ + SL +SY DLFF+ FGT+ +P +AEIIITV+DV +P P+P + R +V Sbjct: 85 TAKTEGCFNDFFTLLQISYGGAGQESLNNIRCRARCAASGFSMSATS-AQSCHCGNNYPSVFHRVRDTQCSQPCSPDRTVCEESGCCGDAKGKYFTVSFAREIDVTLQLLRTLTFDYRVQNKLFQQHVEG-RLASAASLMVASFDGVEAMSSTASTNAQVDG--------------------VIGFGNGCPTGWAVHKRACYKRVSGRLTDFSTAQATCQNMGGNLPMLKTVDENDFVRSLLNGQAGWLGM----------------------------TAKSGRWDWDLFTGWGP---GEPASAGPTKLSSLFGPGGG---------------------------------------------TTFNDYSEDIVALDTLTIGYRV-----------------------------------TGIDAIQVSY----LRKDGTIYAG-PSRGAFQRTSNTA---AITLAQDERIAKVEGTSSGAQLRTLTFIVTNL--NGGNAKTYGPYGTSLLGNSGGTSSFSYTPG----DVIMAVYGSHTDMA---VTQIGFVESNIPRCTSVDDAGNWKAIDC-DMKQDGVTYLCERRPISTSAIDCPDGWISYGSACYQGQTGNQVSWNEARMKC-VQLGGSLANVDSSTTKSQVQGLMGGK-GFLGV---------------KDLSITPGKTRQWGW-----------QGFSAW--GSNQ-----------------------PRANQACSLMEPSGLW--ASTDCGTLHSTRSVVCETEALDTICNCPSG--------------------WQAFQCSCYSVQQQLPQQTWDGAAFSCESQKARLVNVGSREETNFLL-----GLTKGQGM---FLGLKDSERSGKLTSGYFRKWSGDRAP----------------PVGGGADAQCATMRPDGSWASISCLSQ--IGTYVCQRRMTAPEASVHDVSNGERFRFLQVDTQQP--------------------------VLWGQPIPVRIQHADSGAFMAVDFTGRVYQTFVESSKDTLFQLETVPSTNAFLIQSLAYEAMYLNYDPSTGGLMGGTAKLNVS-----DYAVETGIGGTNSVSIANAQAIKKDRLLTEKRRDGRGVKYTEKK--------KPDATPAPKRESRRKRTNRRDLQAGGTQGYEGTGGAGFTLAGNTPASTMAPF--QKYANLPATVFMASTLIAPLALQNLQISV-AVFREDTMESPRLCTMFIYDLTPNSDSYTCYQVQGDPTGL-PLVEMEMAAWITQDKTSILSPRSPLENGRTRCENSAPAETVTCNVAYGEGLTFQRELDITFG---------------------------------------------QYYAFFFQINQGSAAG--------SGGNFGGYYN-FQAAYTNVYTSQVIRSYIETRNWAVVVPVSPQSLATVQFWISTVDINYVWQAILNAQGSFDISSMGLYLSTGQSLTTLSYLEDLFFYTFGTFAYPSQAEIIITVDDVENQKYPFPVPSMTNVVRHAEV 1272
BLAST of NO01G01620 vs. NCBI_GenBank
Match: EWM29088.1 (wsc domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 279.6 bits (714), Expect = 5.800e-71 Identity = 200/678 (29.50%), Postives = 291/678 (42.92%), Query Frame = 0 Query: 863 AQKMCGSLGGRLVVIDSKEENEWVLAQFQDSMTFNNGFLPGYIGLNNLLNGEEYDWSYYENWQHSPSPSPQPALEPITAKTPLEPTAHVSIITCAQMARDGSWEA-KSCDNEERASCFVCKKPRAATYPAIRPYEDEQWAIEVVEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQGPTSCAYPWCHDCYDAYLKNINTNEYLCVNDQNRLFLSWNRDPAWCLWTIVMHGDSGAVALLTPHGAGLFYDEQEGGLVVRFLPPVVDVSQQAHPFRKHYNKADQSQPGPQPNVLTPPSDPHPWVNNVFGVDGIACFYSSRPIRPIAWRYLRI-----NILARSRELDQPGVKECSIAVYDQTPHTESFRCWRRPMSGFGAD----------DLVYLEQEALLFFDQSTFAAPRIPLPNGRVRCENQSPTETATCTFAYGQGLTLSRQFRANWGYTISDVVTHRVNTNPEQSALFRVPPPAKRQEKQKWHDDXXXXXXKRLFKRHKHVNEKTEAEPLPRDLTLSISELKEFQNAFSVAYTNFYEILIVKSYVETRNWQLSVPVAPRTSDTIQFWLSSENLRYRWRALFAARGGFTITSGGVPI----GDHHSLGDVSYFRDLFFFVFGTYEFPYEAEIIIT 1521 AQ C GG LV + S +N +VL+ Y G L+ E SYYE L + I+ Q+ DGSW A D++ R +CF C+K +PA+RP+E ++W IE+ S Y WC DC D+YLKN+NT+ YLCV+DQ L+LS + +WC+WTI + D+GA+ L+ H A L Y + L R LP + VS+ +++ D S L P DG+A F S I YLRI N ++S + G++ECS+AV+D +P +++F C RP+ AD + +Q+AL +DQS++ R PLPNGRV C NQ+PTET +C AYG+ + L R+FR N+G + D V + EQ FR K + + V K P ++ + K QNA + ++ FY+ L K V+ R WQL + VAP T+ TIQ W++++ L+YRWRA+F RGGFT+T G + G SLGD+ D+ + ++G+YE P E + +T Sbjct: 243 AQDKCQLEGGELVNVRSSVQNAFVLSL--------------YAGCLGWLHIE----SYYEG-------------------ATLHIDQNFGEISHLQLKPDGSWIALPGYDSDRRVACFACQKACTPPFPALRPHEADEWDIEI-------------------------------------------------------------------------SAYPSSTYAWCTDCADSYLKNVNTHLYLCVDDQYHLYLSMQPESSWCIWTIKIDPDTGAITFLSHHNAILTYQAERNELTCRSLPSMYHVSRSF--VSRNHLMFDGS-------FLNAP-------------DGLAIFNPSSLPLSIKEHYLRIAVHSLNRRSKSAFIAPRGLQECSMAVWDMSPQSDTFMC--RPLVVDNADIGVLGSAATISPLVFKQKALHVYDQSSYVTAREPLPNGRVTCLNQNPTETVSCVLAYGRAIILIRRFRTNFGILLFDTVADLFQVSSEQKQRFRFQTDLKTRRPE-----------------GNVVAGKERRRSRPNEVDFLSEQGKLVQNALTGSFNTFYQFLFFKELVDVRTWQLGINVAPLTALTIQLWMTTQYLKYRWRAVFQPRGGFTLTLFGRRLSGQKGATFSLGDLVVSNDILYSMYGSYEEPVEVALTMT 769 HSP 2 Score: 154.8 bits (390), Expect = 2.100e-33 Identity = 72/134 (53.73%), Postives = 94/134 (70.15%), Query Frame = 0 Query: 39 IGGLTEKVEGCFDRFDSEFAVELGRENLSNKRCQAICTDHGYALSAT--GLSDSCFCGNDYPSVFRRVDTGQCDLPCNPDKASCFAFTCCGSRDERFFTVSWSGEMDILKQLLRQLSHDYRFNSPTFREKIEGD 171 IGG E+VEGCF+ F ++FAV L + N SN RCQAICT+ GYAL+AT G C+CGNDYP + VDT +CD PC+ DK +C FTCCG R+ FT+SW+GE++ +K LL +LS +YR +S FR+ I D Sbjct: 54 IGGKDEQVEGCFNNFIAKFAVSLAQNNFSNLRCQAICTERGYALAATGGGSQSICWCGNDYPGLPHEVDTFRCDRPCSLDKKTCHLFTCCGDRNGSLFTISWNGEVNPVKHLLGRLSEEYR-SSTIFRQNIIND 186
BLAST of NO01G01620 vs. NCBI_GenBank
Match: EWM26794.1 (low affinity immunoglobulin epsilon fc receptor [Nannochloropsis gaditana]) HSP 1 Score: 160.2 bits (404), Expect = 5.100e-35 Identity = 96/321 (29.91%), Postives = 151/321 (47.04%), Query Frame = 0 Query: 1215 FYSSRPIRPIAWRYLRINILARSRELDQPGVKECSIAVYDQTPHTESFRCWRRPMSGFGAD-DLVYLEQEALLFFDQSTFAAPRIPLPNGRVRCENQSPTETATCTFAYGQGLTLSRQFRANWGYTISDVVTHRVNTNPEQSALFRVPPPAKRQEKQKWHDDXXXXXXKRLFKRHKHVNEKTEAEPLPRDLTLSISELKEFQNAFSVAYTNFYEILIVKSYVETRNWQLSVPVAPRTSDTIQFWLSSENLRYRWRALFAARGGFTITSGGVPIGDHHSLGDVSYFRDLFFFVFGTYEFPYEAEIIITVNDVPGDGWPLPLP 1535 F S++ P++ + L+I + + E P + CS+ +YD T ++SF C+ + G ++ +V L +A D++T PR PL NGR +CEN+SPT+T TCTF+YG+GLT S WG ++ F+ + E T + AY N Y + +YVE+RNW ++VPV P T TIQ+WL+S ++ Y W A+ A G F +++ GV G +H+L DVS DL + +G Y +AE+IIT +++ + L +P Sbjct: 740 FSSTKSFGPVSVQNLQIGVTVQKSE-SMPNPRYCSLKIYDLTATSDSFSCYY--IQGDTSNLPMVDLSVQAFTIQDKTTNMKPRTPLQNGRTKCENESPTDTLTCTFSYGEGLTFSTALSVTWGQNYAN-----------------------------------------QFQMERRYGENT-----------------AIWYNYLYAYDNQYTSITTNTYVESRNWAVNVPVPPLTVCTIQYWLTSVDVNYVWLAILKATGSFELSANGVYFGTNHALSDVSDPWDLNVYQWGRYSAASQAEVIITTDEMQAAKYQLQVP 999 HSP 2 Score: 125.6 bits (314), Expect = 1.400e-24 Identity = 56/124 (45.16%), Postives = 80/124 (64.52%), Query Frame = 0 Query: 45 KVEGCFDRFDSEFAVELGRENLSNKRCQAICTDHGYALSATGLSDSCFCGNDYPSVFRRVDTGQCDLPCNPDKASCFAFTCCGSRDERFFTVSWSGEMDILKQLLRQLSHDYRFNSPTFREKIE 169 K EGCF +FD + + N+ CQA C +++SAT L ++C+CGN+YPS F +V CD PC+PDK CF + CCGSRD +FTV+++G QLLRQL++DYR ++P R+ I+ Sbjct: 145 KTEGCFSKFDFLLSQTYPAVEIDNRVCQAFCASQRFSVSATSL-NTCYCGNNYPSAFFKVKDDICDNPCSPDKTYCFVYACCGSRDGTYFTVAFAG------QLLRQLTYDYRMSNPRLRDHIK 261 The following BLAST results are available for this feature:
BLAST of NO01G01620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01620 ID=NO01G01620|Name=NO01G01620|organism=Nannochloropsis oceanica|type=gene|length=4677bpback to top protein sequence of NO01G01620.1 >NO01G01620.1-protein ID=NO01G01620.1-protein|Name=NO01G01620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1559bpback to top Synonyms
Publications
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