NO01G01600, NO01G01600 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01600 vs. NCBI_GenBank
Match: EWM29064.1 (hypothetical protein Naga_100024g42 [Nannochloropsis gaditana]) HSP 1 Score: 277.3 bits (708), Expect = 2.100e-70 Identity = 663/1006 (65.90%), Postives = 711/1006 (70.68%), Query Frame = 0
Query: 140 RAVASYFLEHSKAAPVSPSVGTPMLLDEGRQAAIVTKLAKEGYLKQAVRLLPNLRAPSPLLIRTLLMACLNTGDLALALVVLKMPHVHPSVQQYTLVIKICARQERWFEPLRILRDMRARGA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAQARKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPECRSGIKAAVWPNIISYNTVIEACAKKAKYEEALLVLRSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRLHQPHPYTPEPDVVSYNSAIKACGRAGQWKLALVLFSEMKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPEIMTYNAVIAACAKSGRLNEALDLLRECGEASXXXXXXXXXXXXXXXXXXXXXXXXXXVMKANGVEPDVVSYTTVMQRSSVDVATGVMNRMRAAGLKVGVVTYNSLLNACAREGDWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDGCAAESSSSSNSNVVTRGLYERAMAAFGKAGEWEKVLWLLERTENPDRKATNVXXXXXXXXXXXXXXXXXXXNMTARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDEGWLPSHRSYTMVVEACRRAGESRLAEEVGRRWARDKERLARAKLLDGGNDGRSRPMYGNGKGRKSSNGSNGYGISDINTDFSSP---LRQAYISKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLGPQFPFQPKR 1142
R V+SYFL HS AP S+ P+LLD+ RQAAIV+KLAKEGYLKQAV+LL NL+APSPLL+RTLLMAC+N L LAL V+KMPHVHPSVQQYTLVI+ICARQERWFE +R+LRDMR RGA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX A RK G G K ++ PNIISYNT IEACAK+ ++EEAL +LRSM R HQ PEPD+V+Y+SAIKACG AGQW+ AL L +E++ + E G+AS XXXXXXXXXXXXXXXXXXXXXXXVMKANGVEPDVVSYTTVMQRSSVD +LLNACAREGDWR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DG + S T+ LYE+AMAAFG+AGEWEKVLWLLE + PD+K T XXXXXXXXXXXXXXXXXXX T++G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV+ GWLPSH+SYT+VVEACRRAGESRLAEEV RRWARDKE LARA GG G + + +G+ +S G +G S I S A + +R SGLGPQFPFQ KR
Sbjct: 118 RGVSSYFLTHSTLAPPHASLHPPLLLDDERQAAIVSKLAKEGYLKQAVKLLSNLKAPSPLLVRTLLMACVNAESLPLALAVVKMPHVHPSVQQYTLVIQICARQERWFEAVRLLRDMRTRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRRKDGRGSTVSDQTQEVGANQGNTTNTIPG---------NRGSKPSIRPNIISYNTAIEACAKRGRFEEALAILRSMQVPDTEKAGGHVPLPSASKKRNGASHH---RRHQ--RLVPEPDLVTYHSAIKACGHAGQWEHALSLLAEVR-------------------------AARWIELEPXXXXXXXXXXXXXXXXXXXXXXXXXXGDASNVVXXXXXXXXXXXXXXXXXXXXXXXVMKANGVEPDVVSYTTVMQRSSVDXXXXXXXXXXXXXXXXXXXXXXALLNACAREGDWRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGIGDQGSGKGG----TKELYEKAMAAFGRAGEWEKVLWLLEGMDRPDQKVTXXXXXXXXXXXXXXXXXXXXXXXTSKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESGWLPSHKSYTLVVEACRRAGESRLAEEVSRRWARDKESLARANRRRGGK-GLADTRRRDNRGKSNSEGRK-HGTSPIENQPESSRGNKDSARVDTTR---------------------GSSSATVSITNHVSHPPPSSGLGPQFPFQTKR 1057
BLAST of NO01G01600 vs. NCBI_GenBank
Match: XP_005855111.1 (hypothetical protein NGA_2004420 [Nannochloropsis gaditana CCMP526] >XP_005856045.1 hypothetical protein NGA_2004410 [Nannochloropsis gaditana CCMP526] >EKU20311.1 hypothetical protein NGA_2004410 [Nannochloropsis gaditana CCMP526] >EKU21247.1 hypothetical protein NGA_2004420 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 277.3 bits (708), Expect = 2.100e-70 Identity = 663/1006 (65.90%), Postives = 711/1006 (70.68%), Query Frame = 0
Query: 140 RAVASYFLEHSKAAPVSPSVGTPMLLDEGRQAAIVTKLAKEGYLKQAVRLLPNLRAPSPLLIRTLLMACLNTGDLALALVVLKMPHVHPSVQQYTLVIKICARQERWFEPLRILRDMRARGA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAQARKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPECRSGIKAAVWPNIISYNTVIEACAKKAKYEEALLVLRSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRLHQPHPYTPEPDVVSYNSAIKACGRAGQWKLALVLFSEMKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPEIMTYNAVIAACAKSGRLNEALDLLRECGEASXXXXXXXXXXXXXXXXXXXXXXXXXXVMKANGVEPDVVSYTTVMQRSSVDVATGVMNRMRAAGLKVGVVTYNSLLNACAREGDWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDGCAAESSSSSNSNVVTRGLYERAMAAFGKAGEWEKVLWLLERTENPDRKATNVXXXXXXXXXXXXXXXXXXXNMTARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDEGWLPSHRSYTMVVEACRRAGESRLAEEVGRRWARDKERLARAKLLDGGNDGRSRPMYGNGKGRKSSNGSNGYGISDINTDFSSP---LRQAYISKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLGPQFPFQPKR 1142
R V+SYFL HS AP S+ P+LLD+ RQAAIV+KLAKEGYLKQAV+LL NL+APSPLL+RTLLMAC+N L LAL V+KMPHVHPSVQQYTLVI+ICARQERWFE +R+LRDMR RGA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX A RK G G K ++ PNIISYNT IEACAK+ ++EEAL +LRSM R HQ PEPD+V+Y+SAIKACG AGQW+ AL L +E++ + E G+AS XXXXXXXXXXXXXXXXXXXXXXXVMKANGVEPDVVSYTTVMQRSSVD +LLNACAREGDWR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DG + S T+ LYE+AMAAFG+AGEWEKVLWLLE + PD+K T XXXXXXXXXXXXXXXXXXX T++G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV+ GWLPSH+SYT+VVEACRRAGESRLAEEV RRWARDKE LARA GG G + + +G+ +S G +G S I S A + +R SGLGPQFPFQ KR
Sbjct: 118 RGVSSYFLTHSTLAPPHASLHPPLLLDDERQAAIVSKLAKEGYLKQAVKLLSNLKAPSPLLVRTLLMACVNAESLPLALAVVKMPHVHPSVQQYTLVIQICARQERWFEAVRLLRDMRTRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRRKDGRGSTVSDQTQEVGANQGNTTNTIPG---------NRGSKPSIRPNIISYNTAIEACAKRGRFEEALAILRSMQVPDTEKAGGHVPLPSASKKRNGASHH---RRHQ--RLVPEPDLVTYHSAIKACGHAGQWEHALSLLAEVR-------------------------AARWIELEPXXXXXXXXXXXXXXXXXXXXXXXXXXGDASNVVXXXXXXXXXXXXXXXXXXXXXXXVMKANGVEPDVVSYTTVMQRSSVDXXXXXXXXXXXXXXXXXXXXXXALLNACAREGDWRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGIGDQGSGKGG----TKELYEKAMAAFGRAGEWEKVLWLLEGMDRPDQKVTXXXXXXXXXXXXXXXXXXXXXXXTSKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESGWLPSHKSYTLVVEACRRAGESRLAEEVSRRWARDKESLARANRRRGGK-GLADTRRRDNRGKSNSEGRK-HGTSPIENQPESSRGNKDSARVDTTR---------------------GSSSATVSITNHVSHPPPSSGLGPQFPFQTKR 1057 The following BLAST results are available for this feature:
BLAST of NO01G01600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 2
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01600 ID=NO01G01600|Name=NO01G01600|organism=Nannochloropsis oceanica|type=gene|length=3426bpback to top protein sequence of NO01G01600.1 >NO01G01600.1-protein ID=NO01G01600.1-protein|Name=NO01G01600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1142bpback to top Synonyms
Publications
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