NO01G01590, NO01G01590 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01590 vs. NCBI_GenBank
Match: EWM29049.1 (DNA glycosylase [Nannochloropsis gaditana]) HSP 1 Score: 459.1 bits (1180), Expect = 1.600e-125 Identity = 224/274 (81.75%), Postives = 240/274 (87.59%), Query Frame = 0
Query: 140 LQDLLKKWIQPGTLLKITASETSPYPQQERPTPYEALYARDLLAALHGEPEREKLEGNRSGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCKGRTQLAPDGPCPLGRVGKMRGEL 414
++ LL KW PGT +KITASE SPYPQQ RPTP+EALY RDLLA LHGEPER+ LE N SGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAF+NLK +PTYKQVLAA PG VEE IKFAGLS+IKVGRIRAIL TVL+E P C GEPSLEFLR +PT IKEYL FKGVGPKTIACVLLFTIG DDFAVDTHVWHIAK+LGWVPGAASRED YKHLNNR+PD +KY+LHVLLVLHGKKC SCCKGRTQLAPDGPCPLG++ KMR EL
Sbjct: 158 IKALLDKWTGPGTSIKITASEISPYPQQRRPTPFEALYVRDLLAQLHGEPERDVLEENCSGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFENLKVRYPTYKQVLAAAPGAVEETIKFAGLSDIKVGRIRAILETVLEEHPEKCPEGEPSLEFLRALPTAGIKEYLSKFKGVGPKTIACVLLFTIGHDDFAVDTHVWHIAKKLGWVPGAASREDAYKHLNNRVPDAIKYALHVLLVLHGKKCESCCKGRTQLAPDGPCPLGKLQKMREEL 431
BLAST of NO01G01590 vs. NCBI_GenBank
Match: XP_005646124.1 (DNA glycosylase, partial [Coccomyxa subellipsoidea C-169] >EIE21580.1 DNA glycosylase, partial [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 226.5 bits (576), Expect = 1.800e-55 Identity = 126/255 (49.41%), Postives = 163/255 (63.92%), Query Frame = 0
Query: 156 ITASETSPYPQQERPTPYEALYARDLLAALHGEPEREKL--EGNRSGQGTLLEKRA-RSVLDSLVRTILSQNTTDALSKRAFDNLKKHFP---TYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCC-KGRTQLAPDGPCPL 404
++ S SP+P RPT E ARD LA LHGEP + K G + L + ++VLDSLVRTILSQNTTD S RAF +LK FP ++ VL A PG++EE I+ GL++IK RI+AIL T+L+ER C +E+LREM +EIK L FKGVG KT+ACVL+F + ++F VDTHVW I+K LGWVP A+R+ Y+HLN +P V+Y LHVL+V HGK+C C G+ + G CPL
Sbjct: 1 VSISPKSPFPDFVRPTAEECRAARDALALLHGEPRQHKPIDAGTAAAAADSLHTHSQQTVLDSLVRTILSQNTTDVTSHRAFASLKAAFPGEEGWEDVLRAPPGKMEEAIRMGGLADIKAERIKAILATLLEERGKIC------MEYLREMSDDEIKAEL--FKGVGKKTVACVLMFCLAREEFPVDTHVWRISKSLGWVPAKATRDAAYEHLNLHVPADVRYDLHVLMVEHGKRCPRCASNGKPRKESHGDCPL 247
BLAST of NO01G01590 vs. NCBI_GenBank
Match: XP_024368888.1 (putative DNA glycosylase At3g47830 [Physcomitrella patens] >PNR60934.1 hypothetical protein PHYPA_003727 [Physcomitrella patens]) HSP 1 Score: 226.5 bits (576), Expect = 1.800e-55 Identity = 129/295 (43.73%), Postives = 168/295 (56.95%), Query Frame = 0
Query: 151 GTLLKITASETSPYPQQERPTPYEALYARDLLAALHG----------------------------------------EPEREKLEGNRSGQG-TLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCK-GRTQLAPDGPCPL 404
G +++ + SPYP RP P E R+ L+ LHG E E +K E + T R+VLDSLV TILSQNTTD S++AF +LK+ FPT+++V AA P +VE+ I+ GL+E K RI IL T+ ER + C LE++R M ++IK L FKGVGPKT+ACVL+F + ++F VDTHV+ ++K LGWVP +A RE TY H+N+R+PD VKY LH LLV HGK+C C K GR Q APDGPCPL
Sbjct: 207 GQAVELAVTSGSPYPDFARPYPEECYEVRNRLSQLHGTGSYARGKSCPTIDPLQVLALEYHSEEVTAADTAGALVVSEVEEQKREDEHEDRTLTGCPSVRRTVLDSLVGTILSQNTTDNNSRKAFASLKQAFPTWEEVHAADPKKVEDAIRCGGLAETKAKRIINILDTIFTERGSIC------LEYVRSMNVDQIKAELSRFKGVGPKTVACVLMFHLEQNEFPVDTHVFRLSKMLGWVPASADREKTYLHMNSRVPDEVKYDLHCLLVTHGKRCPRCAKGGRAQTAPDGPCPL 495
BLAST of NO01G01590 vs. NCBI_GenBank
Match: GAQ89783.1 (hypothetical protein KFL_005620010 [Klebsormidium nitens]) HSP 1 Score: 223.0 bits (567), Expect = 2.000e-54 Identity = 117/194 (60.31%), Postives = 134/194 (69.07%), Query Frame = 0
Query: 211 SVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCK-GRTQLAPDGPCPL 404
SVLDSLVRTILSQNTTD SKRAF +LK+ FPT++ V AA PG + IK GL+EIK RI IL + + G LE LR M E++K L FKGVGPKT+ACVL+F + ++F VDTHVW I+KRLGWVP A RE TY HLN R+PD VKY LH LLV HGKKC C K GR Q APDGPCPL
Sbjct: 229 SVLDSLVRTILSQNTTDTNSKRAFASLKQAFPTWEDVRAAGPGPLAASIKSGGLAEIKARRILDILEHLASK------YGALELEHLRSMSDEQVKAELSQFKGVGPKTVACVLMFCLDRNEFPVDTHVWRISKRLGWVPQTADREATYLHLNQRVPDDVKYDLHCLLVGHGKKCPGCAKGGRPQKAPDGPCPL 416
BLAST of NO01G01590 vs. NCBI_GenBank
Match: XP_006836744.1 (putative DNA glycosylase At3g47830 isoform X2 [Amborella trichopoda] >ERM99597.1 hypothetical protein AMTR_s00088p00146000 [Amborella trichopoda]) HSP 1 Score: 222.2 bits (565), Expect = 3.300e-54 Identity = 124/265 (46.79%), Postives = 161/265 (60.75%), Query Frame = 0
Query: 158 ASETSPYPQQERPTPYEALYARDLLAALHGEPER---------------EKLEGNRSGQGTLLEK---RARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCKG-RTQLAPDGPCPL 404
A+ SPYP +RPTP E L RD L +LHG PE E+ + +G + + SVLD LV ILSQNTTD S+RAF++LK FPT++ V AA+ V IK GL+E K I+ IL+ +L+++ C L++LREMP ++IK L +FKGVGPKT+ACVL+F + DDF VDTHV+ I K +GWVP A+RE Y HLN++IPD +K+ L+ LLV HGK C C KG R Q P G CPL
Sbjct: 42 ANPRSPYPNFQRPTPQECLIVRDALISLHGFPEEFAEFRRKEAVVNDSFEEKQQKLDDEGEVRIAPLIQGGSVLDGLVSVILSQNTTDVNSRRAFESLKLAFPTWEDVHAAESKSVVNTIKCGGLAETKASCIKNILSALLEQKGKIC------LDYLREMPIDKIKAELRHFKGVGPKTVACVLMFYLQKDDFPVDTHVFRIVKAIGWVPSEANREKAYLHLNSQIPDDLKFDLNCLLVTHGKHCEKCTKGHRAQRTPLGSCPL 300
BLAST of NO01G01590 vs. NCBI_GenBank
Match: XP_002500969.1 (predicted protein, partial [Micromonas commoda] >ACO62227.1 predicted protein, partial [Micromonas commoda]) HSP 1 Score: 220.7 bits (561), Expect = 9.700e-54 Identity = 117/222 (52.70%), Postives = 149/222 (67.12%), Query Frame = 0
Query: 162 SPYPQQERPTPYEALYARDLLAALHGEPEREKLEGNRSGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGK 384
SP+P RPT E ARD LA LH ++ E ++ G + ++VLDSLV TILSQNTTD S RAF LK FPT++QV AKP +VE+ I+ GL+E+KV RI+ IL T+ +ER GE S+E+LR+M +++K L FKGVGPKT++CVL+F + DF VDTHVW IAK LGW+P A RED Y+HLN R+PD K+ LHVLLV HGK
Sbjct: 1 SPFPNLARPTVDECWAARDALAKLHSS-FFQQFETQQAAGGDAIGP-GKTVLDSLVGTILSQNTTDTNSHRAFAILKHRFPTWEQVRTAKPAKVEDAIRCGGLAEVKVSRIQVILNTLKEER------GECSMEYLRDMSDDDVKAELSRFKGVGPKTVSCVLMFCLKRPDFPVDTHVWKIAKDLGWIPKGAGREDAYEHLNRRVPDDCKFDLHVLLVEHGK 214
BLAST of NO01G01590 vs. NCBI_GenBank
Match: CEM17483.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 219.5 bits (558), Expect = 2.200e-53 Identity = 120/242 (49.59%), Postives = 152/242 (62.81%), Query Frame = 0
Query: 163 PYPQQERPTPYEALYARDLLAALHGEPEREKLEGNRSGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCK-GRTQLAPDGPCPL 404
PYP RP+ E L LHG G ++ R SV+D LVR +LSQNTTD LSK+ F +LK FPT++ VL A +VE I+ GL+ KV RI+AIL +V+ VAGEPSLE LR +P E++K+ L + GVGPKT+ACV++F +G +F VDTHV HIA+RL WVP +A+R Y+HLN R+PD +K+SLHVLLV HGK CV C K GR Q G CPL
Sbjct: 88 PYPNLRRPSADECYAVGRALRDLHG--------------GDRVKGRDCSVMDMLVRVMLSQNTTDKLSKQTFQSLKAAFPTWRSVLDAPAADVEATIQKGGLAHTKVKRIQAILQSVVD--GGHVVAGEPSLEHLRGVPDEQVKQALLRYNGVGPKTVACVMMFGLGRSEFPVDTHVLHIAQRLHWVPQSATRVQAYQHLNRRVPDDIKHSLHVLLVEHGKCCVPCAKNGRLQKESSGSCPL 313
BLAST of NO01G01590 vs. NCBI_GenBank
Match: PSC68875.1 (hypothetical protein C2E20_7623 [Micractinium conductrix]) HSP 1 Score: 218.0 bits (554), Expect = 6.300e-53 Identity = 120/233 (51.50%), Postives = 146/233 (62.66%), Query Frame = 0
Query: 158 ASETSPYPQQERPTPYEALYARDLLAALHGEPEREKLEGNRSGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCK 391
A+ PYPQ PT + LAA+HG P R++ + Q EK R+VLDSLVRT+LSQNTTD S RAF +LK+ FP+++QV AA E+ + I+ GL++IK RI+AIL T+ ER GE SLE LR E + LG FKGVG KTIACV LF + DFAVDTHVW I K LGW P SR+ Y HLN R+PD +KY LHVLLV HGK C +C K
Sbjct: 42 AAAPGPYPQWPSPTAAACHAVVERLAAMHGLPSRQRAASGGAPQVGCEEK--RTVLDSLVRTLLSQNTTDTTSGRAFASLKERFPSWQQVAAAPLPELADSIRVGGLADIKATRIQAILHTLAAER------GEMSLEHLRAAAPEAVHSELGRFKGVGKKTIACVQLFALERPDFAVDTHVWEITKTLGWAPSNCSRDQAYDHLNARVPDELKYDLHVLLVRHGKACPACAK 266
BLAST of NO01G01590 vs. NCBI_GenBank
Match: CEM03455.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 217.2 bits (552), Expect = 1.100e-52 Identity = 120/242 (49.59%), Postives = 151/242 (62.40%), Query Frame = 0
Query: 163 PYPQQERPTPYEALYARDLLAALHGEPEREKLEGNRSGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCK-GRTQLAPDGPCPL 404
PYP RP+ E L LHG G ++ R SVLD LV +LSQNTTD LSK+ F +LK FPT++ VL A +VE I+ GL+ KV RI+AIL +V+ E V+GEPSLE LR + E++K L + GVGPKT+ACV++F +G +F VDTHV HIA+RL WVP AA+R Y+HLN R+PD +K+SLH+LLV HGK CVSC K GR Q G CPL
Sbjct: 85 PYPNLRRPSADECYAVERALRDLHG--------------GDRVKGRDCSVLDMLVSVMLSQNTTDKLSKQTFQSLKAAFPTWRAVLDAPAADVEATIQKGGLAHTKVKRIQAILQSVVDE--GHVVSGEPSLEHLRGVADEQVKPALLRYNGVGPKTVACVMMFGLGRSEFPVDTHVLHIAQRLHWVPQAATRIQAYQHLNRRVPDDIKHSLHLLLVEHGKCCVSCAKNGRLQKESSGSCPL 310
BLAST of NO01G01590 vs. NCBI_GenBank
Match: XP_011620921.1 (putative DNA glycosylase At3g47830 isoform X1 [Amborella trichopoda]) HSP 1 Score: 215.7 bits (548), Expect = 3.100e-52 Identity = 124/271 (45.76%), Postives = 161/271 (59.41%), Query Frame = 0
Query: 158 ASETSPYPQQERPTPYEALYARDLLAALHGEPER---------------EKLEGNRSGQGTLLEK---RARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKT------IACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCKG-RTQLAPDGPCPL 404
A+ SPYP +RPTP E L RD L +LHG PE E+ + +G + + SVLD LV ILSQNTTD S+RAF++LK FPT++ V AA+ V IK GL+E K I+ IL+ +L+++ C L++LREMP ++IK L +FKGVGPKT +ACVL+F + DDF VDTHV+ I K +GWVP A+RE Y HLN++IPD +K+ L+ LLV HGK C C KG R Q P G CPL
Sbjct: 42 ANPRSPYPNFQRPTPQECLIVRDALISLHGFPEEFAEFRRKEAVVNDSFEEKQQKLDDEGEVRIAPLIQGGSVLDGLVSVILSQNTTDVNSRRAFESLKLAFPTWEDVHAAESKSVVNTIKCGGLAETKASCIKNILSALLEQKGKIC------LDYLREMPIDKIKAELRHFKGVGPKTALICWQVACVLMFYLQKDDFPVDTHVFRIVKAIGWVPSEANREKAYLHLNSQIPDDLKFDLNCLLVTHGKHCEKCTKGHRAQRTPLGSCPL 306 The following BLAST results are available for this feature:
BLAST of NO01G01590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01590 ID=NO01G01590|Name=NO01G01590|organism=Nannochloropsis oceanica|type=gene|length=1431bpback to top protein sequence of NO01G01590.1 >NO01G01590.1-protein ID=NO01G01590.1-protein|Name=NO01G01590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=477bpback to top Synonyms
Publications
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