NO01G01590, NO01G01590 (gene) Nannochloropsis oceanica

Overview
NameNO01G01590
Unique NameNO01G01590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1431
Alignment locationchr1:400327..401757 -

Link to JBrowse

Properties
Property NameValue
DescriptionDNA glycosylase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:400327..401757 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR011257DNA_glycosylase
IPR003265HhH-GPD_domain
Homology
BLAST of NO01G01590 vs. NCBI_GenBank
Match: EWM29049.1 (DNA glycosylase [Nannochloropsis gaditana])

HSP 1 Score: 459.1 bits (1180), Expect = 1.600e-125
Identity = 224/274 (81.75%), Postives = 240/274 (87.59%), Query Frame = 0
Query:  140 LQDLLKKWIQPGTLLKITASETSPYPQQERPTPYEALYARDLLAALHGEPEREKLEGNRSGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCKGRTQLAPDGPCPLGRVGKMRGEL 414
            ++ LL KW  PGT +KITASE SPYPQQ RPTP+EALY RDLLA LHGEPER+ LE N SGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAF+NLK  +PTYKQVLAA PG VEE IKFAGLS+IKVGRIRAIL TVL+E P  C  GEPSLEFLR +PT  IKEYL  FKGVGPKTIACVLLFTIG DDFAVDTHVWHIAK+LGWVPGAASRED YKHLNNR+PD +KY+LHVLLVLHGKKC SCCKGRTQLAPDGPCPLG++ KMR EL
Sbjct:  158 IKALLDKWTGPGTSIKITASEISPYPQQRRPTPFEALYVRDLLAQLHGEPERDVLEENCSGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFENLKVRYPTYKQVLAAAPGAVEETIKFAGLSDIKVGRIRAILETVLEEHPEKCPEGEPSLEFLRALPTAGIKEYLSKFKGVGPKTIACVLLFTIGHDDFAVDTHVWHIAKKLGWVPGAASREDAYKHLNNRVPDAIKYALHVLLVLHGKKCESCCKGRTQLAPDGPCPLGKLQKMREEL 431          
BLAST of NO01G01590 vs. NCBI_GenBank
Match: XP_005646124.1 (DNA glycosylase, partial [Coccomyxa subellipsoidea C-169] >EIE21580.1 DNA glycosylase, partial [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 226.5 bits (576), Expect = 1.800e-55
Identity = 126/255 (49.41%), Postives = 163/255 (63.92%), Query Frame = 0
Query:  156 ITASETSPYPQQERPTPYEALYARDLLAALHGEPEREKL--EGNRSGQGTLLEKRA-RSVLDSLVRTILSQNTTDALSKRAFDNLKKHFP---TYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCC-KGRTQLAPDGPCPL 404
            ++ S  SP+P   RPT  E   ARD LA LHGEP + K    G  +     L   + ++VLDSLVRTILSQNTTD  S RAF +LK  FP    ++ VL A PG++EE I+  GL++IK  RI+AIL T+L+ER   C      +E+LREM  +EIK  L  FKGVG KT+ACVL+F +  ++F VDTHVW I+K LGWVP  A+R+  Y+HLN  +P  V+Y LHVL+V HGK+C  C   G+ +    G CPL
Sbjct:    1 VSISPKSPFPDFVRPTAEECRAARDALALLHGEPRQHKPIDAGTAAAAADSLHTHSQQTVLDSLVRTILSQNTTDVTSHRAFASLKAAFPGEEGWEDVLRAPPGKMEEAIRMGGLADIKAERIKAILATLLEERGKIC------MEYLREMSDDEIKAEL--FKGVGKKTVACVLMFCLAREEFPVDTHVWRISKSLGWVPAKATRDAAYEHLNLHVPADVRYDLHVLMVEHGKRCPRCASNGKPRKESHGDCPL 247          
BLAST of NO01G01590 vs. NCBI_GenBank
Match: XP_024368888.1 (putative DNA glycosylase At3g47830 [Physcomitrella patens] >PNR60934.1 hypothetical protein PHYPA_003727 [Physcomitrella patens])

HSP 1 Score: 226.5 bits (576), Expect = 1.800e-55
Identity = 129/295 (43.73%), Postives = 168/295 (56.95%), Query Frame = 0
Query:  151 GTLLKITASETSPYPQQERPTPYEALYARDLLAALHG----------------------------------------EPEREKLEGNRSGQG-TLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCK-GRTQLAPDGPCPL 404
            G  +++  +  SPYP   RP P E    R+ L+ LHG                                        E E +K E     +  T      R+VLDSLV TILSQNTTD  S++AF +LK+ FPT+++V AA P +VE+ I+  GL+E K  RI  IL T+  ER + C      LE++R M  ++IK  L  FKGVGPKT+ACVL+F +  ++F VDTHV+ ++K LGWVP +A RE TY H+N+R+PD VKY LH LLV HGK+C  C K GR Q APDGPCPL
Sbjct:  207 GQAVELAVTSGSPYPDFARPYPEECYEVRNRLSQLHGTGSYARGKSCPTIDPLQVLALEYHSEEVTAADTAGALVVSEVEEQKREDEHEDRTLTGCPSVRRTVLDSLVGTILSQNTTDNNSRKAFASLKQAFPTWEEVHAADPKKVEDAIRCGGLAETKAKRIINILDTIFTERGSIC------LEYVRSMNVDQIKAELSRFKGVGPKTVACVLMFHLEQNEFPVDTHVFRLSKMLGWVPASADREKTYLHMNSRVPDEVKYDLHCLLVTHGKRCPRCAKGGRAQTAPDGPCPL 495          
BLAST of NO01G01590 vs. NCBI_GenBank
Match: GAQ89783.1 (hypothetical protein KFL_005620010 [Klebsormidium nitens])

HSP 1 Score: 223.0 bits (567), Expect = 2.000e-54
Identity = 117/194 (60.31%), Postives = 134/194 (69.07%), Query Frame = 0
Query:  211 SVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCK-GRTQLAPDGPCPL 404
            SVLDSLVRTILSQNTTD  SKRAF +LK+ FPT++ V AA PG +   IK  GL+EIK  RI  IL  +  +       G   LE LR M  E++K  L  FKGVGPKT+ACVL+F +  ++F VDTHVW I+KRLGWVP  A RE TY HLN R+PD VKY LH LLV HGKKC  C K GR Q APDGPCPL
Sbjct:  229 SVLDSLVRTILSQNTTDTNSKRAFASLKQAFPTWEDVRAAGPGPLAASIKSGGLAEIKARRILDILEHLASK------YGALELEHLRSMSDEQVKAELSQFKGVGPKTVACVLMFCLDRNEFPVDTHVWRISKRLGWVPQTADREATYLHLNQRVPDDVKYDLHCLLVGHGKKCPGCAKGGRPQKAPDGPCPL 416          
BLAST of NO01G01590 vs. NCBI_GenBank
Match: XP_006836744.1 (putative DNA glycosylase At3g47830 isoform X2 [Amborella trichopoda] >ERM99597.1 hypothetical protein AMTR_s00088p00146000 [Amborella trichopoda])

HSP 1 Score: 222.2 bits (565), Expect = 3.300e-54
Identity = 124/265 (46.79%), Postives = 161/265 (60.75%), Query Frame = 0
Query:  158 ASETSPYPQQERPTPYEALYARDLLAALHGEPER---------------EKLEGNRSGQGTLLEK---RARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCKG-RTQLAPDGPCPL 404
            A+  SPYP  +RPTP E L  RD L +LHG PE                E+ +     +G +      +  SVLD LV  ILSQNTTD  S+RAF++LK  FPT++ V AA+   V   IK  GL+E K   I+ IL+ +L+++   C      L++LREMP ++IK  L +FKGVGPKT+ACVL+F +  DDF VDTHV+ I K +GWVP  A+RE  Y HLN++IPD +K+ L+ LLV HGK C  C KG R Q  P G CPL
Sbjct:   42 ANPRSPYPNFQRPTPQECLIVRDALISLHGFPEEFAEFRRKEAVVNDSFEEKQQKLDDEGEVRIAPLIQGGSVLDGLVSVILSQNTTDVNSRRAFESLKLAFPTWEDVHAAESKSVVNTIKCGGLAETKASCIKNILSALLEQKGKIC------LDYLREMPIDKIKAELRHFKGVGPKTVACVLMFYLQKDDFPVDTHVFRIVKAIGWVPSEANREKAYLHLNSQIPDDLKFDLNCLLVTHGKHCEKCTKGHRAQRTPLGSCPL 300          
BLAST of NO01G01590 vs. NCBI_GenBank
Match: XP_002500969.1 (predicted protein, partial [Micromonas commoda] >ACO62227.1 predicted protein, partial [Micromonas commoda])

HSP 1 Score: 220.7 bits (561), Expect = 9.700e-54
Identity = 117/222 (52.70%), Postives = 149/222 (67.12%), Query Frame = 0
Query:  162 SPYPQQERPTPYEALYARDLLAALHGEPEREKLEGNRSGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGK 384
            SP+P   RPT  E   ARD LA LH     ++ E  ++  G  +    ++VLDSLV TILSQNTTD  S RAF  LK  FPT++QV  AKP +VE+ I+  GL+E+KV RI+ IL T+ +ER      GE S+E+LR+M  +++K  L  FKGVGPKT++CVL+F +   DF VDTHVW IAK LGW+P  A RED Y+HLN R+PD  K+ LHVLLV HGK
Sbjct:    1 SPFPNLARPTVDECWAARDALAKLHSS-FFQQFETQQAAGGDAIGP-GKTVLDSLVGTILSQNTTDTNSHRAFAILKHRFPTWEQVRTAKPAKVEDAIRCGGLAEVKVSRIQVILNTLKEER------GECSMEYLRDMSDDDVKAELSRFKGVGPKTVSCVLMFCLKRPDFPVDTHVWKIAKDLGWIPKGAGREDAYEHLNRRVPDDCKFDLHVLLVEHGK 214          
BLAST of NO01G01590 vs. NCBI_GenBank
Match: CEM17483.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 219.5 bits (558), Expect = 2.200e-53
Identity = 120/242 (49.59%), Postives = 152/242 (62.81%), Query Frame = 0
Query:  163 PYPQQERPTPYEALYARDLLAALHGEPEREKLEGNRSGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCK-GRTQLAPDGPCPL 404
            PYP   RP+  E       L  LHG              G  ++ R  SV+D LVR +LSQNTTD LSK+ F +LK  FPT++ VL A   +VE  I+  GL+  KV RI+AIL +V+       VAGEPSLE LR +P E++K+ L  + GVGPKT+ACV++F +G  +F VDTHV HIA+RL WVP +A+R   Y+HLN R+PD +K+SLHVLLV HGK CV C K GR Q    G CPL
Sbjct:   88 PYPNLRRPSADECYAVGRALRDLHG--------------GDRVKGRDCSVMDMLVRVMLSQNTTDKLSKQTFQSLKAAFPTWRSVLDAPAADVEATIQKGGLAHTKVKRIQAILQSVVD--GGHVVAGEPSLEHLRGVPDEQVKQALLRYNGVGPKTVACVMMFGLGRSEFPVDTHVLHIAQRLHWVPQSATRVQAYQHLNRRVPDDIKHSLHVLLVEHGKCCVPCAKNGRLQKESSGSCPL 313          
BLAST of NO01G01590 vs. NCBI_GenBank
Match: PSC68875.1 (hypothetical protein C2E20_7623 [Micractinium conductrix])

HSP 1 Score: 218.0 bits (554), Expect = 6.300e-53
Identity = 120/233 (51.50%), Postives = 146/233 (62.66%), Query Frame = 0
Query:  158 ASETSPYPQQERPTPYEALYARDLLAALHGEPEREKLEGNRSGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCK 391
            A+   PYPQ   PT        + LAA+HG P R++     + Q    EK  R+VLDSLVRT+LSQNTTD  S RAF +LK+ FP+++QV AA   E+ + I+  GL++IK  RI+AIL T+  ER      GE SLE LR    E +   LG FKGVG KTIACV LF +   DFAVDTHVW I K LGW P   SR+  Y HLN R+PD +KY LHVLLV HGK C +C K
Sbjct:   42 AAAPGPYPQWPSPTAAACHAVVERLAAMHGLPSRQRAASGGAPQVGCEEK--RTVLDSLVRTLLSQNTTDTTSGRAFASLKERFPSWQQVAAAPLPELADSIRVGGLADIKATRIQAILHTLAAER------GEMSLEHLRAAAPEAVHSELGRFKGVGKKTIACVQLFALERPDFAVDTHVWEITKTLGWAPSNCSRDQAYDHLNARVPDELKYDLHVLLVRHGKACPACAK 266          
BLAST of NO01G01590 vs. NCBI_GenBank
Match: CEM03455.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 217.2 bits (552), Expect = 1.100e-52
Identity = 120/242 (49.59%), Postives = 151/242 (62.40%), Query Frame = 0
Query:  163 PYPQQERPTPYEALYARDLLAALHGEPEREKLEGNRSGQGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCK-GRTQLAPDGPCPL 404
            PYP   RP+  E       L  LHG              G  ++ R  SVLD LV  +LSQNTTD LSK+ F +LK  FPT++ VL A   +VE  I+  GL+  KV RI+AIL +V+ E     V+GEPSLE LR +  E++K  L  + GVGPKT+ACV++F +G  +F VDTHV HIA+RL WVP AA+R   Y+HLN R+PD +K+SLH+LLV HGK CVSC K GR Q    G CPL
Sbjct:   85 PYPNLRRPSADECYAVERALRDLHG--------------GDRVKGRDCSVLDMLVSVMLSQNTTDKLSKQTFQSLKAAFPTWRAVLDAPAADVEATIQKGGLAHTKVKRIQAILQSVVDE--GHVVSGEPSLEHLRGVADEQVKPALLRYNGVGPKTVACVMMFGLGRSEFPVDTHVLHIAQRLHWVPQAATRIQAYQHLNRRVPDDIKHSLHLLLVEHGKCCVSCAKNGRLQKESSGSCPL 310          
BLAST of NO01G01590 vs. NCBI_GenBank
Match: XP_011620921.1 (putative DNA glycosylase At3g47830 isoform X1 [Amborella trichopoda])

HSP 1 Score: 215.7 bits (548), Expect = 3.100e-52
Identity = 124/271 (45.76%), Postives = 161/271 (59.41%), Query Frame = 0
Query:  158 ASETSPYPQQERPTPYEALYARDLLAALHGEPER---------------EKLEGNRSGQGTLLEK---RARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAAKPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREMPTEEIKEYLGNFKGVGPKT------IACVLLFTIGVDDFAVDTHVWHIAKRLGWVPGAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCKG-RTQLAPDGPCPL 404
            A+  SPYP  +RPTP E L  RD L +LHG PE                E+ +     +G +      +  SVLD LV  ILSQNTTD  S+RAF++LK  FPT++ V AA+   V   IK  GL+E K   I+ IL+ +L+++   C      L++LREMP ++IK  L +FKGVGPKT      +ACVL+F +  DDF VDTHV+ I K +GWVP  A+RE  Y HLN++IPD +K+ L+ LLV HGK C  C KG R Q  P G CPL
Sbjct:   42 ANPRSPYPNFQRPTPQECLIVRDALISLHGFPEEFAEFRRKEAVVNDSFEEKQQKLDDEGEVRIAPLIQGGSVLDGLVSVILSQNTTDVNSRRAFESLKLAFPTWEDVHAAESKSVVNTIKCGGLAETKASCIKNILSALLEQKGKIC------LDYLREMPIDKIKAELRHFKGVGPKTALICWQVACVLMFYLQKDDFPVDTHVFRIVKAIGWVPSEANREKAYLHLNSQIPDDLKFDLNCLLVTHGKHCEKCTKGHRAQRTPLGSCPL 306          
The following BLAST results are available for this feature:
BLAST of NO01G01590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29049.11.600e-12581.75DNA glycosylase [Nannochloropsis gaditana][more]
XP_005646124.11.800e-5549.41DNA glycosylase, partial [Coccomyxa subellipsoidea... [more]
XP_024368888.11.800e-5543.73putative DNA glycosylase At3g47830 [Physcomitrella... [more]
GAQ89783.12.000e-5460.31hypothetical protein KFL_005620010 [Klebsormidium ... [more]
XP_006836744.13.300e-5446.79putative DNA glycosylase At3g47830 isoform X2 [Amb... [more]
XP_002500969.19.700e-5452.70predicted protein, partial [Micromonas commoda] >A... [more]
CEM17483.12.200e-5349.59unnamed protein product [Vitrella brassicaformis C... [more]
PSC68875.16.300e-5351.50hypothetical protein C2E20_7623 [Micractinium cond... [more]
CEM03455.11.100e-5249.59unnamed protein product [Vitrella brassicaformis C... [more]
XP_011620921.13.100e-5245.76putative DNA glycosylase At3g47830 isoform X1 [Amb... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008200NSK008200Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01590.1NO01G01590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576335gene_135Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100024g41gene1533Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01590.1NO01G01590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01590 ID=NO01G01590|Name=NO01G01590|organism=Nannochloropsis oceanica|type=gene|length=1431bp
ATGGCGGGTCCAGTCGCGGTCAAGCAAGAGCCCGCTTGCAGCAGCACCAG
AAGCAGCAGCATCAATAGCAGCGGCAAAGACAACAAGCGCGGGGGGGGTT
GGGAGGCATGCCAGGCACATGACAACGCCGTCGCCACGGCGACCACCACC
ACCCGCAGCACGCCGGGTAAGAGCAGTAGGGGGAAGGGGAAGGCCATGGC
TTACATCAAGAAGGAGGAAGACGTGGAAGAAAAGGCCGCGGCTGCTACCA
CGACGACGACGACGAGGAGCAGCAGCAGGCCACGCCGCGTCCGCGAGGAG
ACACCTACGCCCTCTTCAGCGGCTGCTGCATCTTTCCTCGCTAAGAGAGC
CAAGAATGAAAAGCAGGATGAGAGCGGCGCTTTTTTTACCACTATCAACG
ACGACGACAAGGCAGCCCTCCAAGACCTGCTGAAAAAATGGATCCAACCC
GGAACGCTCCTTAAAATCACGGCCAGTGAGACAAGCCCTTATCCACAGCA
GGAACGCCCAACTCCTTATGAGGCCCTGTATGCCCGTGACCTTCTCGCGG
CTTTACACGGAGAGCCGGAGCGGGAAAAGTTAGAAGGGAATCGCAGTGGT
CAGGGGACGTTGCTTGAGAAGAGGGCTCGCTCGGTGTTGGACTCGTTGGT
ACGGACGATACTTAGTCAGAATACGACTGATGCACTGAGTAAGCGGGCTT
TCGATAATTTGAAGAAACATTTTCCGACCTATAAGCAAGTTCTGGCGGCC
AAGCCTGGAGAGGTGGAGGAGGTGATCAAGTTTGCCGGGTTGTCTGAGAT
TAAAGTGGGGAGAATCCGCGCGATTTTGACGACCGTGTTGAAGGAACGAC
CGAATGACTGCGTGGCTGGAGAACCAAGCCTGGAGTTTTTGCGAGAGATG
CCCACAGAGGAGATTAAGGAGTATCTAGGGAATTTCAAGGGAGTTGGCCC
TAAAACGATTGCATGCGTGCTCTTGTTCACCATCGGCGTGGATGATTTTG
CAGTGGATACGCATGTGTGGCACATTGCCAAGAGGCTGGGATGGGTGCCA
GGGGCAGCTTCTCGGGAAGATACATACAAACATTTGAATAATCGCATTCC
GGACTGTGTTAAGTACAGCTTGCATGTGTTGCTGGTGCTGCATGGGAAGA
AGTGCGTGTCCTGCTGTAAGGGTCGAACACAACTGGCCCCCGATGGCCCC
TGTCCGTTGGGGAGGGTCGGGAAAATGAGGGGAGAGCTAGCGGGGTTGGC
TGCCGCTGCTGCTACAGCTGCTGCTACTACTACTGTTGCTTGTGGTGGTG
TTGTTGTTGGTTGCAATAATTGTGATAAAGCAGGGGTCGTGGTGAAGAAG
GTGATGAAGGGCAGGGAGGATGTCGGGGGGAGGAAGAGGGATAAGATCAA
GGCTATTACCATAAAGGAAGAAATTGCGTGA
back to top

protein sequence of NO01G01590.1

>NO01G01590.1-protein ID=NO01G01590.1-protein|Name=NO01G01590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=477bp
MAGPVAVKQEPACSSTRSSSINSSGKDNKRGGGWEACQAHDNAVATATTT
TRSTPGKSSRGKGKAMAYIKKEEDVEEKAAAATTTTTTRSSSRPRRVREE
TPTPSSAAAASFLAKRAKNEKQDESGAFFTTINDDDKAALQDLLKKWIQP
GTLLKITASETSPYPQQERPTPYEALYARDLLAALHGEPEREKLEGNRSG
QGTLLEKRARSVLDSLVRTILSQNTTDALSKRAFDNLKKHFPTYKQVLAA
KPGEVEEVIKFAGLSEIKVGRIRAILTTVLKERPNDCVAGEPSLEFLREM
PTEEIKEYLGNFKGVGPKTIACVLLFTIGVDDFAVDTHVWHIAKRLGWVP
GAASREDTYKHLNNRIPDCVKYSLHVLLVLHGKKCVSCCKGRTQLAPDGP
CPLGRVGKMRGELAGLAAAAATAAATTTVACGGVVVGCNNCDKAGVVVKK
VMKGREDVGGRKRDKIKAITIKEEIA*
back to top
Synonyms
Publications