NO01G01530, NO01G01530 (gene) Nannochloropsis oceanica

Overview
NameNO01G01530
Unique NameNO01G01530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3186
Alignment locationchr1:388837..392022 +

Link to JBrowse

Properties
Property NameValue
DescriptionSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:388837..392022 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006091generation of precursor metabolites and energy
Vocabulary: INTERPRO
TermDefinition
IPR037099Fum_R/Succ_DH_flav-like_C_sf
IPR027477Succ_DH/fumarate_Rdtase_cat
IPR036188FAD/NAD-bd_sf
IPR003953FAD_bind_dom
IPR015939Fum_Rdtase/Succ_DH_flav-like_C
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005739mitochondrion
Homology
[Close]
BLAST of NO01G01530 vs. NCBI_GenBank
Match: EWM29067.1 (succinate dehydrogenase flavoprotein subunit [Nannochloropsis gaditana])

HSP 1 Score: 1232.2 bits (3187), Expect = 0.000e+0
Identity = 606/647 (93.66%), Postives = 625/647 (96.60%), Query Frame = 0 
Query:    1 MLRNVSNRLLGGVFQAQRRGLHASPTRLAAISGVPAQGKVSSTPNAKYTIIDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMNDEGRCVGITALNMEDGTVHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNKEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKMGDGSMDHDHVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADISKPGDRVPDMPANAGERSVEDLDKVRFAKGSTSTASIRKNMQKTMQDHAAVYRTQESLAEGVTKIDEVLSTWHDLKVTDRSLMWNTDLIESLELRNLLSNAATTMHAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKSTLDENEVKAVPPFKRVY 648
            MLR+V  RLLG V Q QRR +HAS  RLAAISGVP +GKVSSTPNAKYT+IDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNM+EDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIM+ +GRCVGITALNMEDGT+HRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRN EGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKK  DGS+D DHV+PGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADI+KPGD+VP MPA+AG+RSVEDLDKVRFA GST+TA+IRK MQKTMQ+HAAVYRTQ+SLAEG  KIDEVLSTW DLKVTDRSLMWNTDLIESLELRNLLSNAATTM+AAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHK TLDENEVK VPPFKRVY
Sbjct:    1 MLRSVGKRLLGSVAQVQRRAIHASSARLAAISGVPPEGKVSSTPNAKYTVIDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 647
[Close]
BLAST of NO01G01530 vs. NCBI_GenBank
Match: EWM29068.1 (succinate dehydrogenase flavoprotein subunit [Nannochloropsis gaditana])

HSP 1 Score: 1124.4 bits (2907), Expect = 0.000e+0
Identity = 549/577 (95.15%), Postives = 564/577 (97.75%), Query Frame = 0 
Query:   71 MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMNDEGRCVGITALNMEDGTVHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNKEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKMGDGSMDHDHVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADISKPGDRVPDMPANAGERSVEDLDKVRFAKGSTSTASIRKNMQKTMQDHAAVYRTQESLAEGVTKIDEVLSTWHDLKVTDRSLMWNTDLIESLELRNLLSNAATTMHAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKSTLDENEVKAVPPFKRVY 648
            MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNM+EDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIM+ +GRCVGITALNMEDGT+HRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRN EGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKK  DGS+D DHV+PGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADI+KPGD+VP MPA+AG+RSVEDLDKVRFA GST+TA+IRK MQKTMQ+HAAVYRTQ+SLAEG  KIDEVLSTW DLKVTDRSLMWNTDLIESLELRNLLSNAATTM+AAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHK TLDENEVK VPPFKRVY
Sbjct:    1 MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 577
[Close]
BLAST of NO01G01530 vs. NCBI_GenBank
Match: XP_009038442.1 (hypothetical protein AURANDRAFT_37947 [Aureococcus anophagefferens] >EGB06691.1 hypothetical protein AURANDRAFT_37947 [Aureococcus anophagefferens])

HSP 1 Score: 1003.0 bits (2592), Expect = 4.100e-289
Identity = 492/601 (81.86%), Postives = 536/601 (89.18%), Query Frame = 0 
Query:   48 YTIIDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMNDEGRCVGITALNMEDGTVHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNKEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKMGDGS-MDHDHVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADISKPGDRVPDMPANAGERSVEDLDKVRFAKGSTSTASIRKNMQKTMQDHAAVYRTQESLAEGVTKIDEVLSTWHDLKVTDRSLMWNTDLIESLELRNLLSNAATTMHAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKSTLDENEVKAVPPFKRVY 648
            YT++DH YDV VVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDW+WHMYDTVKGSDWLGDQDAIHYMCREAP+AV ELES+GLPFSRT+DGKIYQRAFGGQSL YGKGGQAYRC  AADRTGHAMLHTLYGRSLAF+TTYF+EYFALDLIM+DEG CVGI A+NMEDGT+HRI+A+NTVLATGGYGRAYFSCTSAHTCTGDGNAM LRAGL  EDPEFVQFHPTGIYGAGCLITEGCRGEGGILRN EGERFMERYAP+AKDLASRDVVSRAMTMEIREGRGVGK+ DH +LHLDHLP +LLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNH GEVI      DGS +DHD VVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRA ALRIADI++PG  VP +PA+A E+++ D+D +RF+ G   TA +RK+MQKTMQDHAAVYRT ESLAEG  KI + +  + D+ VTDRSL+WNTDLIE++ELRNLL NAATTM AAEARKESRGAHARED  +R D  WM HT+  FD  T+KTT++YRP+H  TLD +E   VPP  RVY
Sbjct:   29 YTVVDHSYDVCVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWKWHMYDTVKGSDWLGDQDAIHYMCREAPQAVLELESFGLPFSRTDDGKIYQRAFGGQSLDYGKGGQAYRCCAAADRTGHAMLHTLYGRSLAFDTTYFLEYFALDLIMDDEGSCVGIVAINMEDGTLHRINASNTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGLAAEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKDADHCYLHLDHLPAELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHLGEVIRQVTGPDGSVIDHDEVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAEPGAPVPPLPADAAEKTIADVDAIRFSSGPRPTADVRKDMQKTMQDHAAVYRTAESLAEGCEKIQKNVEAFADIGVTDRSLIWNTDLIETIELRNLLPNAATTMFAAEARKESRGAHAREDTPDRLDDEWMKHTMCYFDEATNKTTVTYRPIHYETLDADECPVVPPVARVY 629
[Close]
BLAST of NO01G01530 vs. NCBI_GenBank
Match: XP_009822820.1 (succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Aphanomyces astaci] >ETV87957.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Aphanomyces astaci])

HSP 1 Score: 993.0 bits (2566), Expect = 4.200e-286
Identity = 487/617 (78.93%), Postives = 537/617 (87.03%), Query Frame = 0 
Query:   34 VPAQGKVSSTPNAKYTIIDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMNDEGRCVGITALNMEDGTVHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNKEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKMGDGSMDH---DHVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADISKPGDRVPDMPANAGERSVEDLDKVRFAKGSTSTASIRKNMQKTMQDHAAVYRTQESLAEGVTKIDEVLSTWHDLKVTDRSLMWNTDLIESLELRNLLSNAATTMHAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKSTLDENEVKAVPPFKRVY 648
            V + G  + +    YTI+DHE+D VVVGAGGAGLRAAMG AEAGFKTAC+TKLFPTRSHTVAAQGGINAAL NM+EDDWRWHMYDTVKGSDWLGDQDAIHYMC+EAPRAV ELE+YGLPFSRT++GKIYQRAFGGQSL YGKGGQAYRCACAADRTGHAMLHTLYGRSLAF+T YFIEYFALDLIMNDEG C G+ ALNMEDGT+HR H NNTVLATGGYGRAYFSCTSAHTCTGDG  M LRAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN EGERFMERYAP+AKDLASRDVVSRAMTMEIREGRGVGKEKDH++LHLDHLPP+LLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTN+FGEV+ P   G   ++    D VV GLFAAGEAA ASVHGANRLGANSLLDIVVFGRA ALRIADISKPG+    +P NAG++S+  +D +R+A G+  TA +R  MQKTMQ  AAVYRTQE+LAEGV KID +   + D++VTDRSL+WNTDLIE++EL+NLL+ A+ TMH AEARKESRGAHAREDFS RDD NWM HT+A  D +T KT I+YRPVH  TLDE+E K V P  RVY
Sbjct:   12 VSSTGARAFSGKGAYTIVDHEFDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALANMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPRAVLELEAYGLPFSRTDEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTEYFIEYFALDLIMNDEGECCGVIALNMEDGTIHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMALRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKEKDHIYLHLDHLPPELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYFGEVVVPDTTGLPDVNKTYPDKVVKGLFAAGEAASASVHGANRLGANSLLDIVVFGRAAALRIADISKPGEAKRPLPRNAGDQSLHMVDTIRYANGAIPTAELRLEMQKTMQSDAAVYRTQETLAEGVVKIDAITPKFKDIQVTDRSLIWNTDLIETIELKNLLACASATMHGAEARKESRGAHAREDFSARDDVNWMKHTLAYHDDETTKTHIAYRPVHYHTLDEDECKTVAPVARVY 628
[Close]
BLAST of NO01G01530 vs. NCBI_GenBank
Match: XP_008870100.1 (succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Aphanomyces invadans] >ETW01102.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Aphanomyces invadans])

HSP 1 Score: 991.1 bits (2561), Expect = 1.600e-285
Identity = 484/617 (78.44%), Postives = 537/617 (87.03%), Query Frame = 0 
Query:   34 VPAQGKVSSTPNAKYTIIDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMNDEGRCVGITALNMEDGTVHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNKEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKMGDGSMDH---DHVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADISKPGDRVPDMPANAGERSVEDLDKVRFAKGSTSTASIRKNMQKTMQDHAAVYRTQESLAEGVTKIDEVLSTWHDLKVTDRSLMWNTDLIESLELRNLLSNAATTMHAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKSTLDENEVKAVPPFKRVY 648
            V   G  + +    YTI+DHE+D VVVGAGGAGLRAAMG AEAGFKTAC+TKLFPTRSHTVAAQGGINAAL NM+EDDWRWHMYDTVKGSDWLGDQDAIHYMC+EAPRAV ELE+YGLPFSRT++GKIYQRAFGGQSL+YGKGGQAYRCACAADRTGHAMLHTLYGRSLAF+T YFIEYFALDLIMND+G C G+ ALNMEDGT+HR H NNTVLATGGYGRAYFSCTSAHTCTGDG  M LRAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN EGERFMERYAP+AKDLASRDVVSRAMTMEIREGRGVGKEKDH++LHLDHLPP+LLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNH+GEV+ P   G   ++    D V+ GLFAAGEAA ASVHGANRLGANSLLDIVVFGRA ALRIA+ISKPG+    +P NAGE+S+  +D +R+A G+  TA +R  MQKTMQ  AAVYRTQE+LAEGV KID +   + D++VTDRSL+WNTDLIE++EL+NLL+ A+ TMH AEARKESRGAHAREDFS RDD NWM HT+A  D ++ KT I+YRPVH  TLDE+E K V P  RVY
Sbjct:   12 VRGTGARAFSAKGAYTIVDHEFDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALANMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPRAVLELEAYGLPFSRTDEGKIYQRAFGGQSLQYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTEYFIEYFALDLIMNDQGECCGVIALNMEDGTIHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMALRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKEKDHIYLHLDHLPPELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVMPDTSGLPDVNKTYPDKVIKGLFAAGEAASASVHGANRLGANSLLDIVVFGRAAALRIAEISKPGEAKRPLPRNAGEQSLHMVDSIRYANGAIPTAELRLEMQKTMQSDAAVYRTQETLAEGVQKIDAITPKFKDIRVTDRSLIWNTDLIETIELKNLLACASATMHGAEARKESRGAHAREDFSARDDVNWMKHTLAYHDDESTKTHIAYRPVHYHTLDEDECKTVAPVARVY 628
[Close]
BLAST of NO01G01530 vs. NCBI_GenBank
Match: XP_012207965.1 (succinate dehydrogenase flavoprotein subunit [Saprolegnia parasitica CBS 223.65] >KDO21309.1 succinate dehydrogenase flavoprotein subunit [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 989.6 bits (2557), Expect = 4.700e-285
Identity = 489/631 (77.50%), Postives = 541/631 (85.74%), Query Frame = 0 
Query:   21 LHASPTRLAAIS-GVPAQGKVSSTPNAKYTIIDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMNDEGRCVGITALNMEDGTVHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNKEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKMG---DGSMDHDHVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADISKPGDRVPDMPANAGERSVEDLDKVRFAKGSTSTASIRKNMQKTMQDHAAVYRTQESLAEGVTKIDEVLSTWHDLKVTDRSLMWNTDLIESLELRNLLSNAATTMHAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKSTLDENEVKAVPPFKRVY 648
            L A+    AAIS  +   G  +++    YTI+DHE+D VVVGAGGAGLRAAMG AEAG KTAC+TKLFPTRSHTVAAQGGINAAL NM+EDDWRWHMYDTVKGSDWLGDQDAIHYMC+EAPRAV ELE+YGLPFSRT+DGKIYQRAFGGQSL YGKGGQAYRCACAADRTGHAMLHTLYGRSLAF+T+YFIEYFALDLIMND G C G+ A+NMEDG++HR H NNTVLATGGYGRAYFSCTSAHTCTGDG  M +RAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN EGERFMERYAP+AKDLASRDVVSRAMTMEIREGRGVG EKDH++LHLDHLP +LLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEV+ P   G      M  D VV GLFAAGEAACASVHGANRLGANSLLDIVVFGRA ALRIA+ISKPG+    MPANAGE S+  +D +R+A G+  TA +R  MQKTMQ+ AAVYRTQE+LAEGV KID+++  + D+KVTDRSL+WNTDLIE++EL+NLL+ A+ TMH AEARKESRGAHAREDFS RDD NWM HT+A  + +   T I+YRPVH  TLDE E K V P  RVY
Sbjct:    2 LQATSKAKAAISRALKTTGARAASTKGGYTIVDHEFDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALANMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPRAVLELEAYGLPFSRTDDGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTSYFIEYFALDLIMNDAGECCGVIAMNMEDGSIHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMAIRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGNEKDHIYLHLDHLPAELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVVIPDTTGLPDANQMYPDKVVKGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGEAKRPMPANAGEASLSMVDSLRYANGAIPTADLRLEMQKTMQNDAAVYRTQETLAEGVQKIDKIVPKFKDIKVTDRSLIWNTDLIETIELKNLLACASATMHGAEARKESRGAHAREDFSTRDDVNWMKHTLAYHNTEEGTTHIAYRPVHYHTLDEEECKTVAPVARVY 632
[Close]
BLAST of NO01G01530 vs. NCBI_GenBank
Match: XP_008889762.1 (succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica INRA-310] >ETI57531.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica P1569] >ETK97267.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica] >ETL50618.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica] >ETM56947.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica] >ETN23578.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica INRA-310] >ETO86276.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica P1976] >ETP27301.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica CJ01A1] >KUF85516.1 Succinate dehydrogenase flavoprotein subunit [Phytophthora nicotianae] >KUF90274.1 hypothetical protein AM588_10002730 [Phytophthora nicotianae])

HSP 1 Score: 988.4 bits (2554), Expect = 1.000e-284
Identity = 490/622 (78.78%), Postives = 535/622 (86.01%), Query Frame = 0 
Query:   29 AAISGVPAQGKVSSTPNAKYTIIDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMNDEGRCVGITALNMEDGTVHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNKEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKMG---DGSMDHDHVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADISKPGDRVPDMPANAGERSVEDLDKVRFAKGSTSTASIRKNMQKTMQDHAAVYRTQESLAEGVTKIDEVLSTWHDLKVTDRSLMWNTDLIESLELRNLLSNAATTMHAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKSTLDENEVKAVPPFKRVY 648
            A  S  P  G  +S   +KYTI+DHEYD VVVGAGGAGLRAAMG AEAG KTAC++KLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAP AV ELE +GLPFSRTE+GKIYQR FGGQSL++GKGGQA R ACAADRTGHAMLHTLYGRSLAF+T+YFIEYFALDLIMND G CVG+ A NMEDGT HR H NNTVLATGGYGRAYFSCTSAHTCTGDG  M LRAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN EGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGK KDH+FLHLDHLPP+LL ERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGI TNH GEV+ P   G    G +  D +VPGLFAAGEAACASVHGANRLGANSLLD+VVFGRA ALRIA+++KPG++   MP + G +++ED+DK+R+A GS STA +R  MQKTMQ  AAVYRTQESL  G  KIDEV+  ++D+KVTDRSL+WNTDL E+LELRNLL+ A+ TMH AEARKESRGAHAREDF+ERDD NWM HT+A  D D  KT I+YR V   TLDENE K VPPF RVY
Sbjct:   25 AVRSSKPLAGVETSALTSKYTIVDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACISKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPEAVRELEDFGLPFSRTEEGKIYQRPFGGQSLEFGKGGQARRTACAADRTGHAMLHTLYGRSLAFDTSYFIEYFALDLIMNDAGECVGVMAFNMEDGTFHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMALRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKNKDHIFLHLDHLPPELLHERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIATNHMGEVVVPDVDGLPEPGKLYPDKIVPGLFAAGEAACASVHGANRLGANSLLDLVVFGRACALRIAELTKPGEKKRPMPKDGGLKAIEDVDKLRYADGSISTAELRLEMQKTMQVDAAVYRTQESLEAGKEKIDEVVPKFNDIKVTDRSLIWNTDLTETLELRNLLACASCTMHGAEARKESRGAHAREDFTERDDVNWMKHTVAYHD-DEGKTHIAYRAVQDQTLDENECKHVPPFARVY 645
[Close]
BLAST of NO01G01530 vs. NCBI_GenBank
Match: ETM03646.1 (succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica])

HSP 1 Score: 988.4 bits (2554), Expect = 1.000e-284
Identity = 490/622 (78.78%), Postives = 535/622 (86.01%), Query Frame = 0 
Query:   29 AAISGVPAQGKVSSTPNAKYTIIDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMNDEGRCVGITALNMEDGTVHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNKEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKMG---DGSMDHDHVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADISKPGDRVPDMPANAGERSVEDLDKVRFAKGSTSTASIRKNMQKTMQDHAAVYRTQESLAEGVTKIDEVLSTWHDLKVTDRSLMWNTDLIESLELRNLLSNAATTMHAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKSTLDENEVKAVPPFKRVY 648
            A  S  P  G  +S   +KYTI+DHEYD VVVGAGGAGLRAAMG AEAG KTAC++KLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAP AV ELE +GLPFSRTE+GKIYQR FGGQSL++GKGGQA R ACAADRTGHAMLHTLYGRSLAF+T+YFIEYFALDLIMND G CVG+ A NMEDGT HR H NNTVLATGGYGRAYFSCTSAHTCTGDG  M LRAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN EGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGK KDH+FLHLDHLPP+LL ERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGI TNH GEV+ P   G    G +  D +VPGLFAAGEAACASVHGANRLGANSLLD+VVFGRA ALRIA+++KPG++   MP + G +++ED+DK+R+A GS STA +R  MQKTMQ  AAVYRTQESL  G  KIDEV+  ++D+KVTDRSL+WNTDL E+LELRNLL+ A+ TMH AEARKESRGAHAREDF+ERDD NWM HT+A  D D  KT I+YR V   TLDENE K VPPF RVY
Sbjct:   25 AVRSSKPLAGVETSALTSKYTIVDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACISKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPEAVRELEDFGLPFSRTEEGKIYQRPFGGQSLEFGKGGQARRTACAADRTGHAMLHTLYGRSLAFDTSYFIEYFALDLIMNDAGECVGVMAFNMEDGTFHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMALRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKNKDHIFLHLDHLPPELLHERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIATNHMGEVVVPDVDGLPEPGKLYPDKIVPGLFAAGEAACASVHGANRLGANSLLDLVVFGRACALRIAELTKPGEKKRPMPKDGGLKAIEDVDKLRYADGSISTAELRLEMQKTMQVDAAVYRTQESLEAGKEKIDEVVPKFNDIKVTDRSLIWNTDLTETLELRNLLACASCTMHGAEARKESRGAHAREDFTERDDVNWMKHTVAYHD-DEGKTHIAYRAVQDQTLDENECKHVPPFARVY 645
[Close]
BLAST of NO01G01530 vs. NCBI_GenBank
Match: XP_008617967.1 (succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Saprolegnia diclina VS20] >EQC28570.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Saprolegnia diclina VS20])

HSP 1 Score: 988.0 bits (2553), Expect = 1.400e-284
Identity = 487/631 (77.18%), Postives = 542/631 (85.90%), Query Frame = 0 
Query:   21 LHASPTRLAAIS-GVPAQGKVSSTPNAKYTIIDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMNDEGRCVGITALNMEDGTVHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNKEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKMG---DGSMDHDHVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADISKPGDRVPDMPANAGERSVEDLDKVRFAKGSTSTASIRKNMQKTMQDHAAVYRTQESLAEGVTKIDEVLSTWHDLKVTDRSLMWNTDLIESLELRNLLSNAATTMHAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKSTLDENEVKAVPPFKRVY 648
            L A+    AAIS  +   G  +++    YTI+DHE+D VVVGAGGAGLRAAMG AEAG KTAC+TKLFPTRSHTVAAQGGINAAL NM+EDDWRWHMYDTVKGSDWLGDQDAIHYMC+EAPRAV ELE+YGLPFSRT+DGKIYQRAFGGQSL +GKGGQAYRCACAADRTGHAMLHTLYGRSLAF+T+YFIEYFALDLIMND G C G+ A+NMEDG++HR H NNTVLATGGYGRAYFSCTSAHTCTGDG  M +RAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN EGERFMERYAP+AKDLASRDVVSRAMTMEIREGRGVGKEKDH++LHLDHLP +LLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEV+ P   G      M  D VV GLFAAGEAACASVHGANRLGANSLLDIVVFGRA ALRIA+ISKPG+    MP+NAG+ S+  +D +R+A G+  TA +R  MQKTMQ+ AAVYRTQE+LAEGV KID+++  + D+KVTDRSL+WNTDLIE++EL+NLL+ A+ TMH AEARKESRGAHAREDFS RDD NWM HT+A  + +   T I+YRPVH  TLDE E K V P  RVY
Sbjct:    2 LQATSKAKAAISRALKTTGARAASTKGGYTIVDHEFDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALANMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPRAVLELEAYGLPFSRTDDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTSYFIEYFALDLIMNDAGECCGVIAMNMEDGSIHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMAIRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKEKDHIYLHLDHLPAELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVVVPDTTGLPDANQMYPDKVVKGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGEAKRPMPSNAGDASLSMVDSLRYANGAIPTADLRLEMQKTMQNDAAVYRTQETLAEGVEKIDKIVPKFKDIKVTDRSLIWNTDLIETIELKNLLACASATMHGAEARKESRGAHAREDFSTRDDVNWMKHTLAYHNTEEGTTHIAYRPVHYHTLDEEECKTVAPVARVY 632
[Close]
BLAST of NO01G01530 vs. NCBI_GenBank
Match: ETP55265.1 (succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica P10297])

HSP 1 Score: 985.7 bits (2547), Expect = 6.800e-284
Identity = 489/622 (78.62%), Postives = 534/622 (85.85%), Query Frame = 0 
Query:   29 AAISGVPAQGKVSSTPNAKYTIIDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMNDEGRCVGITALNMEDGTVHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNKEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKMG---DGSMDHDHVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADISKPGDRVPDMPANAGERSVEDLDKVRFAKGSTSTASIRKNMQKTMQDHAAVYRTQESLAEGVTKIDEVLSTWHDLKVTDRSLMWNTDLIESLELRNLLSNAATTMHAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKSTLDENEVKAVPPFKRVY 648
            A  S  P  G  +S   +KYTI+DHEYD VVVGAGGAGLRAAMG AEAG KTAC++KLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAP AV ELE +GLPFSRTE+GKIYQR FGGQSL++GKGGQA R ACAADRTGHAMLHTLYGRSLAF+T+YFIEYFALDLIMND G CVG+ A NMEDGT HR H NNTVLATGGYGRAYFSCTSAHTCTGDG  M LRAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN EGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGK KDH+FLHLDHLPP+LL ERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGI TNH GEV+ P   G    G +  D +VPGLFAAGEAACASVHGANRLGANSLLD+VVFGRA ALRIA+++KPG++   MP + G +++ED+DK+R+A GS STA +R  MQKTM   AAVYRTQESL  G  KIDEV+  ++D+KVTDRSL+WNTDL E+LELRNLL+ A+ TMH AEARKESRGAHAREDF+ERDD NWM HT+A  D D  KT I+YR V   TLDENE K VPPF RVY
Sbjct:   25 AVRSSKPLAGVETSALTSKYTIVDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACISKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPEAVRELEDFGLPFSRTEEGKIYQRPFGGQSLEFGKGGQARRTACAADRTGHAMLHTLYGRSLAFDTSYFIEYFALDLIMNDAGECVGVMAFNMEDGTFHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMALRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKNKDHIFLHLDHLPPELLHERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIATNHMGEVVVPDVDGLPEPGKLYPDKIVPGLFAAGEAACASVHGANRLGANSLLDLVVFGRACALRIAELTKPGEKKRPMPKDGGLKAIEDVDKLRYADGSISTAELRLEMQKTMLVDAAVYRTQESLEAGKEKIDEVVPKFNDIKVTDRSLIWNTDLTETLELRNLLACASCTMHGAEARKESRGAHAREDFTERDDVNWMKHTVAYHD-DEGKTHIAYRAVQDQTLDENECKHVPPFARVY 645
The following BLAST results are available for this feature:
BLAST of NO01G01530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29067.10.000e+093.66succinate dehydrogenase flavoprotein subunit [Nann... [more]
EWM29068.10.000e+095.15succinate dehydrogenase flavoprotein subunit [Nann... [more]
XP_009038442.14.100e-28981.86hypothetical protein AURANDRAFT_37947 [Aureococcus... [more]
XP_009822820.14.200e-28678.93succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
XP_008870100.11.600e-28578.44succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
XP_012207965.14.700e-28577.50succinate dehydrogenase flavoprotein subunit [Sapr... [more]
XP_008889762.11.000e-28478.78succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
ETM03646.11.000e-28478.78succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
XP_008617967.11.400e-28477.18succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
ETP55265.16.800e-28478.62succinate dehydrogenase [ubiquinone] flavoprotein ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008206NSK008206Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01530.1NO01G01530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576315gene_130Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100024g37gene1537Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01530.1NO01G01530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01530 ID=NO01G01530|Name=NO01G01530|organism=Nannochloropsis oceanica|type=gene|length=3186bp
ACAGACCAACTACAAAAACTACGAAACCTACAAGCCACCAGCACAAGCAC
CGGTAAACAGGAACCTTCGGAAATGCTGCGCAACGTCAGCAACCGCCTCT
TAGGTGGCGTGTTTCAGGCTCAGCGGgtacgtaaagcgaagggagagaga
agacaagcgcgtatgtggtagtctgtattcctccacctcgccagccgaaa
ctccctgccgatctccgcacgcatcccaccagtagagccagcgtcttcac
ttcctgatcggctctctctccccgtttattgtctctcattctactctttc
ctcctccatttgctcaaaacaacagCGCGGTCTCCACGCCTCCCCTACCC
GCCTTGCCGCCATCTCCGGCGTGCCCGCCCAGGGCAAAGTCTCCTCTACC
CCCAATGCCAAGTACACGATCATCGACCACGAGTACGACGTTGTCGTGGT
CGGTGCTGGTGGTGCGGGTTTGCGCGCGGCCATGGGTGCTGCGGAGGCTG
GCTTCAAGACTGCCTGTGTCACCAAGCTATTTCCCACTCGTTCTCATACC
GTGGCGGCTCAAGGAGGGATCAATGCGGCTCTGGGGAACATGTCGGAGGA
CGACTGGCGGTGGCACATGTATGACACAGTGAAGGGAAGTGACTGGCTCG
GAGACCAGGACGCGATCCACTACATGTGTCGGGAGGCTCCGCGAGCCGTG
TACGAATTGGAGAGCTACGGACTGCCCTTCTCGAGGACGGAGGATGGCAA
GATCTACCAGAGAGCTTTTGGGGGACAGAGTTTGAAATACGGAAAGGGTG
GGCAGGCGTATCGTTGTGCGTGTGCGGCGGACAGGACGGGGCATGCTATG
TTACACACCTTGTATGGACGCTCTCTCGCGTTTAATACGACTTATTTCAT
CGAGTATTTCGCCCTGGATCTGATTATGAACGATGAAGGCCGCTGCGTGG
GCATTACGGCCCTGAACATGGAAGACGGTACTGTGCATCGAATCCACGCC
AACAATACCGTCCTTGCCACAGGTGGGTACGGCCGTGCCTATTTCTCGTG
CACTTCAGCGCACACCTGCACCGGGGACGGGAACGCTATGGTGCTTCGCG
CGGGCTTGCCTGTGGAAGACCCGGAATTCGTCCAGTTCCACCCGACAGGT
ATCTATGGCGCTGGGTGTTTGATCACAGAGGGGTGTAGGGGGGAAGGAGG
TATTTTGAGGAACAAGGAGGGAGAGCGATTCATGGAACGATACGCGCCGA
CGGCTAAGGACTTGGCGTCGAGGGATGTAGTGAGCCGGGCCATGACAATG
GAGATCAGGGAAGGTCGGGGGGTGGGGAAGGAAAAGGATCATCTGTTCTT
GCATTTGGACCATCTGCCGCCCGACCTTTTGGCGGAGCGATTGCCGGGGA
TTTCAGAGACGGCGGCCATTTTCGCGGGGGTGGATGTGACTAAAGAACCG
ATTCCTGTGTTGCCGACGGTGCATTACAACATGGGTGGGATCCCCACGAA
TCATTTCGGAGAGGTAATAGCCCCGAAGAAGATGGGAGATGGGAGCATGG
ATCATGACCACGTGGTTCCCGGCTTATTCGCGGCGGGGGAGGCGGCGTGT
GCGTCTGTGCATGGGGCGAATCGGTTGGGGGCGAACTCTCTGTTGGACAT
TGTGGTGTTTGGGCGCGCGACTGCGTTGAGGATTGCTGACATTTCGAAGC
CGGGTGATAGAGTGCCAGATATGCCGGCGAACGCGGGGGAGAGGTCGGTT
GAGGACTTGGACAAGGTGCGGTTTGCCAAGGGGAGTACCAGCACCGCGAG
CATTCGAAAGAATATGCAGAAGACCATGCAGGACCATGCGGCCGTTTATA
Ggtaggttagtgagggttacggtatatgcaggagggaggggctgggggag
ggcttcatttctattattctcttgctctggatggtgcacgccagaatgcc
tgcctgcacgagcaatcgtcaacttgaaaaataaaaccatcaaccctttc
ctccctcgcttgctcacacctcagGACGCAAGAGAGCTTGGCCGAGGGTG
TGACGAAGATCGATGAGGTCTTGTCTACTTGGCATGACTTGAAGGTGACG
GACCGTTCCCTGATGTGGAACACCGACTTGATTGAGTCGTTGGAGCTGAG
gtaaataagaagggaaagagggagagtggggaggagagcgaagactcggg
tgggtgcgcacactgttgttttcgactcggctcgcatgctcactcgtcca
ctcgcccctttcactctctcttttcctcccgctctctccctccttttcag
GAACCTCCTGTCCAATGCCGCCACCACCATGCACGCCGCAGAAGCTCGGA
AGGAAAGCCGCGGGGCACATGCCCGCGAAGACTTCTCCGAGCGCGATGAT
GCCAATTGGATGATGCACACAATTGCTGACTTCGACTATGACACGCACAA
GACCACCATCTCGTACCGCCCGGTCCACAAGAGCACGCTGGACGAGAATG
AAGTCAAGGCGGTGCCTCCTTTCAAGCGAGTGTACTAAGGAAGAATGAAA
AGAGGGGCACAGAGAGCGAACGAAGGAGGGAAAGAGACCGACTGGTTGTC
TGTTGGGAGCAGTTGAGACAAGAGGAGAAAGTCAATTTTGAGGGGAGGAC
ACGGAAGGAGAGAGGGAGAGAGGATGGGAATCGTTTAAAAAGGAGAAAAG
AGTCACGTATATTATCTATCTTTGTGTATCAGCGAAAAGAGGGAAGGGGG
CCGACTTTTTGAGGCAGCGTTGGAAGGCGGAGATAAGGCTGCTACAAATT
TTAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAGGATGAAAT
AACGAAGAGACAGAGGAGGAGAAAGGAGAAGAAAGGAGAAGAAAATTGAG
TCACCATCAAGAAAAAGAAGTAAATACTATCAAGGTCACTCGTAATCCAC
TTGTTTCCTCTCCATCTACTGGGCTAACCAAAATAGGGAGCAGAAAAGAA
AGGTAATGACGAAGAGGAGGAAGGGAGGGGAGCGAGAAAGAGTGGAAGTA
CAAGAAGATGAGGAAAGAGCGCGATCTACCAACTGTGTATACAGAAAGAT
TAAAGGAAATAAAAGTGGGGGAATGGCGAATGCAGTCTCCAAGCAGTAAG
ACACTCGATGACCTCTGGAATTACACTCTCTCATTT
back to top

protein sequence of NO01G01530.1

>NO01G01530.1-protein ID=NO01G01530.1-protein|Name=NO01G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=648bp
MLRNVSNRLLGGVFQAQRRGLHASPTRLAAISGVPAQGKVSSTPNAKYTI
IDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGI
NAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYG
LPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGR
SLAFNTTYFIEYFALDLIMNDEGRCVGITALNMEDGTVHRIHANNTVLAT
GGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCL
ITEGCRGEGGILRNKEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRG
VGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTV
HYNMGGIPTNHFGEVIAPKKMGDGSMDHDHVVPGLFAAGEAACASVHGAN
RLGANSLLDIVVFGRATALRIADISKPGDRVPDMPANAGERSVEDLDKVR
FAKGSTSTASIRKNMQKTMQDHAAVYRTQESLAEGVTKIDEVLSTWHDLK
VTDRSLMWNTDLIESLELRNLLSNAATTMHAAEARKESRGAHAREDFSER
DDANWMMHTIADFDYDTHKTTISYRPVHKSTLDENEVKAVPPFKRVY*
back to top
Synonyms
Publications