NO01G01520, NO01G01520 (gene) Nannochloropsis oceanica

Overview
NameNO01G01520
Unique NameNO01G01520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4022
Alignment locationchr1:384839..388860 -

Link to JBrowse

Properties
Property NameValue
DescriptionProtein Hook homolog 1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:384839..388860 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001715CH-domain
IPR008636Hook-like_fam
Homology
BLAST of NO01G01520 vs. NCBI_GenBank
Match: CBJ27758.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 108.6 bits (270), Expect = 8.200e-20
Identity = 123/351 (35.04%), Postives = 174/351 (49.57%), Query Frame = 0
Query:  382 KQHYRDLEEQNAKYLDQVLALEAEAKASVPSLKRAIEQYKDQVVGLERDRYQAMERREVMEGELERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALFEDAWDN---KEKLLRLERENRMLRKQVEDGGWPRVGEGEDLLLLKSQMQDLRRVKEEREAEAIAAKKRTAELEGNVAMLR--------GQCEEMEEEVGRMKEEGVGRXXXXXXXXXXXXXXXXXXXXXXXQQEKEWEEQVLRLKGEKDRLEEYAKKTLRTVQEKYVQTLGDLKGSNTEYKARNQALEARLLEDRQAQKREEKLLMSCVYGIGMEMLQSE 722
            +Q  ++L++ N+KYLDQ+L LE+ AK ++P+L   IEQYKDQ VGLER  ++A     V E E++R                                                               LFE A +    +E++ R +RE  +L+ QV +GG      G  L +L+SQ++D  RVK+ER AEA+AAK+  A+LE     L                             XXXXXXXXXXXXXXXXXXXXXXX    E E QV  L+ +K++LE Y KKTL   Q+KY+  +   K    E   +   LE+++ +D+ A KREE+LLMS VY +GM++++ +
Sbjct:  287 RQQVKELDDLNSKYLDQMLKLESTAK-TIPTLTMKIEQYKDQAVGLERQNFEASSAVVVKETEVQRLREELEAALQAKMFFEDELIALRDQNKAHADAAEEDPSKGNQRD-------------------LFEGAANRAELREQVARKDREIALLKAQVAEGGGQDGEGGSRLEVLESQLEDALRVKDERSAEALAAKRNAADLEQKNNKLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERETQVNNLQTDKEKLESYTKKTLHKFQDKYMVAISHCKAQIAEKNEKIDYLESKISQDKAASKREERLLMSSVYELGMDIIERQ 617          
BLAST of NO01G01520 vs. NCBI_GenBank
Match: XP_012200183.1 (hypothetical protein SPRG_06068 [Saprolegnia parasitica CBS 223.65] >KDO29013.1 hypothetical protein SPRG_06068 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 82.8 bits (203), Expect = 4.800e-12
Identity = 91/375 (24.27%), Postives = 152/375 (40.53%), Query Frame = 0
Query:  370 KYKLRLEQAAMAKQHYRDLEEQNAKYLDQVLALEAEAKASVPSLKRAIEQYKDQVVGLERDRYQAMERREVMEGELERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALFEDAWDNKEKLLRLERENRMLRKQV-------EDGGWPRVGEGEDLLLLKSQMQDLRRVKEEREAEAIAAKK--------------------RTAELEGNVAMLRGQCEEMEEEVGRMKEEGVGRXXXXXXXXXXXXXXXXXXXXXXXQQEKEWEEQVLRLKGEKDRLEEYAKKTLRTVQEKYVQTLGDLKGSNTEYKARNQALEARLLEDRQAQKREEKLLMSCVYGIGMEM 718
            KYK +L++    KQH +++E QN+ YL+++L LE+  K ++P+LK AIE+YK+QVV LE    + M   ++ E ++ +                                                               +       +E++ RLEREN++L++Q+       +       G   ++LLL+ +  D  R+K   + +A+  K+                    + A LE   A L  Q +  EE+  ++                               + KE E  +  L  +K++LE Y KKTL  VQ KY+  +   +    E +A+   LE++L + +  QKRE+ LLMS  Y IG EM
Sbjct:  345 KYKQKLDEMNTIKQHVKEVESQNSSYLEKMLDLESTIK-TMPTLKLAIEKYKNQVVELETANVEIMSSLQIKEHKVRQLQEELETAMHGKEFLEHQLEELRSNVPDEDGSDMGMYTSAAD---------------------VLGGGMQFREQIARLERENKVLKEQLSAMPQSSDAAAASSTGPSGEVLLLQHERDDALRMKAVWQEKALEMKRQLEQMSDATXXXXXXXXXXXQVAHLEAANAKLLSQLQAHEEQARKLTNN------------IEESDSLRATIGELTNRLKEKETTINNLSQDKEKLETYTKKTLHAVQSKYMVAMSTHRNQLAEKQAKVDLLESKLKDLKSIQKREQALLMSSFYEIGGEM 685          
BLAST of NO01G01520 vs. NCBI_GenBank
Match: XP_008613226.1 (hypothetical protein SDRG_09091 [Saprolegnia diclina VS20] >EQC33103.1 hypothetical protein SDRG_09091 [Saprolegnia diclina VS20])

HSP 1 Score: 82.0 bits (201), Expect = 8.200e-12
Identity = 93/383 (24.28%), Postives = 156/383 (40.73%), Query Frame = 0
Query:  370 KYKLRLEQAAMAKQHYRDLEEQNAKYLDQVLALEAEAKASVPSLKRAIEQYKDQVVGLERDRYQAMERREVMEGELERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALFEDAWD-------NKEKLLRLERENRMLRKQV-------EDGGWPRVGEGEDLLLLKSQMQDLRRVKEEREAEAIAAKKR---------------------TAELEGNVAMLRGQCEEMEEEVGRMKEEGVGRXXXXXXXXXXXXXXXXXXXXXXXQQEKEWEEQVLRLKGEKDRLEEYAKKTLRTVQEKYVQTLGDLKGSNTEYKARNQALEARLLEDRQAQKREEKLLMSCVYGIGMEM 718
            KYK +L++    KQH +++E QN+ YL+++L LE+  K ++P+LK AIE+YK+QVV LE    + M   ++ E ++ +                                                             + ++  A D        +E++ RLEREN++L++Q+       +       G   ++LLL+ +  D  R+K   + +A+  K++                      A LE   A L  Q +  EE+  ++                               + KE E  +  L  +K++LE Y KKTL  VQ KY+  +   +    E +A+   LE++L + +  QKRE+ LLMS  Y IG EM
Sbjct:  345 KYKQKLDEMNTIKQHVKEVESQNSSYLEKMLDLESTIK-TMPTLKLAIEKYKNQVVELETANVEIMSSLQIKEHKVRQ----------------------------LQEELETAMHGKEFLEHQLEELRSNVPDEDGSDMGMYTSAADVLGGGMPFREQIARLERENKVLKEQLNAMPQSSDAAAATSTGPSGEVLLLQHERDDALRMKVVWQEKALEMKRQLEQMSDAAAPSSSSGAAPPQHVAHLEAANAKLLSQLQAHEEQARKLTNN------------IEESDSLRATIGELTNRLKEKETTINNLSQDKEKLETYTKKTLHAVQSKYMVAMSTHRNQLAEKQAKVDLLESKLKDLKSIQKREQALLMSSFYEIGGEM 686          
BLAST of NO01G01520 vs. NCBI_GenBank
Match: OQR88859.1 (hook domain-containing protein [Achlya hypogyna])

HSP 1 Score: 72.8 bits (177), Expect = 5.000e-9
Identity = 82/351 (23.36%), Postives = 145/351 (41.31%), Query Frame = 0
Query:  370 KYKLRLEQAAMAKQHYRDLEEQNAKYLDQVLALEAEAKASVPSLKRAIEQYKDQVVGLERDRYQAMERREVMEGELERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALFEDAWDNKEKLLRLERENRMLRKQVED--------GGWPRVGEGEDLLLLKSQMQDLRRVKEEREAEAIAAKKRTAELE-----GNVAMLRGQCEEMEEEVGRMKE--EGVGRXXXXXXXXXXXXXXXXXXXXXXXQQEKEWEEQVLRLKGEKDRLEEYAKKTLRTVQEKYVQTLGDLKGSNTEYKARNQALEARLLEDRQAQKREEKL 706
            KYK +L++    KQH +++E QN+ YL+++L LE+  K ++P+LK AIE+YK+QVV LE    + M   ++ E ++ +                                                               +       +E++ RLEREN+ML++Q+             P  G   ++LLL+ +  D  R+K   + +A+  K++  +L       + A+   Q +++E    R+    +                            + KE E  +  L  +K++LE Y KKTL  VQ KY+  +   +    E +A+   LE++L + +  QKRE+ L
Sbjct:  345 KYKQKLDEMNTIKQHVKEVEAQNSSYLEKMLDLESTIK-TMPTLKLAIEKYKNQVVELETANVEIMSSLQIKEQKMRQMQEELETAMHGKEFLEHQLEELRANLPDEDGSDIGMYTSAAD---------------------VLGGGMQFREQIARLERENKMLKEQLSSTPGSEASATATPASGPSGEVLLLQHERDDALRMKAVWQEKALEMKRQLEQLSEAAPGTDGAVSPAQLQQLEATNARLASQLQAHEEQARKLTLNIEESDSLRATIGELTNRLKEKETTINNLSQDKEKLETYTKKTLHAVQSKYMVAMSTHRNQLAEKQAKVDLLESKLKDLKSIQKREQAL 673          
BLAST of NO01G01520 vs. NCBI_GenBank
Match: XP_001269416.1 (microtubule binding protein HOOK3, putative [Aspergillus clavatus NRRL 1] >EAW07990.1 microtubule binding protein HOOK3, putative [Aspergillus clavatus NRRL 1])

HSP 1 Score: 70.1 bits (170), Expect = 3.200e-8
Identity = 54/172 (31.40%), Postives = 84/172 (48.84%), Query Frame = 0
Query:   14 EALVQWINSFGPLPPGATSPSSAPPPLIKLEQLTDGLVLADVLHDIAPTRFPRDLLARPLSSSAASTPTTPTANWALALTNLKKLMRLLEAHYEEELGLHLHGGRGGNSYFASLDLAGIAREKRNKDIIRLVELVVLAAVRAPAPEKARAYIERIMGLSPEAQAFLKESVEK 186
            +AL++WINSF           S    L   E+L DG +L ++L DI P  F  +L  R            P+ +W   L NLK + + L  +      L +  G+  +    S DL  IA +   KD  +L++L+++AA+R+P PEK   ++  I  LS  AQ  LK ++E+
Sbjct:    9 QALLEWINSF-----------SLGKTLRATEELNDGTILWEILQDIDPQYFLNELPER-----------NPSDHWVAKLANLKHIHKHLTGY------LRMQTGKLPSGLDPSPDLQAIAEKNSVKDTNKLLKLLLIAAIRSPNPEK---FVSEIQNLSLLAQEGLKVAIEE 149          
BLAST of NO01G01520 vs. NCBI_GenBank
Match: GAX27219.1 (hypothetical protein FisN_13Lh225 [Fistulifera solaris])

HSP 1 Score: 70.1 bits (170), Expect = 3.200e-8
Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 0
Query:   15 ALVQWINSFGPLPPGATSPSSAPPPLIKLEQLTDGLVLADVLHDIAPTRFPRDLLARPLSSSAASTPTTPTANWALALTNLKKLMRLLEAHYEEELGLHLHGGRGGNSYFASLDLAGIAREKRNKDIIRLVELVVLAAVRAPAPEKARAYIERIMGLSPEAQAFLKESVE 185
            A+++++ SF       ++ S AP     + +L+DG+V+ + L +IAP+ F    +AR L             NW L  +N++KL+R L+  ++E+L           + FA++D   IARE     +  LVELV  AAV   +      YI+RIM +SPE Q  +K  +E
Sbjct:    9 AMIEFLASF-------STVSQAP---ADISELSDGVVVFEALSEIAPSYFDPTTIARHLGE-----------NWVLKSSNIRKLVRNLQQFFQEDL--------KKTADFAAIDQTKIAREADADAVASLVELVAAAAVTCSSKGD---YIQRIMQMSPEGQLAMKGVIE 146          

HSP 2 Score: 56.6 bits (135), Expect = 3.700e-4
Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = 0
Query:  653 EEYAKKTLRTVQEKYVQTLGDLKGSNTEYKARNQALEARLLEDRQAQKREEKLLMSCVYGIGMEMLQSERREG 726
            E Y KKTL   Q+KY+  L D K    E + + ++LE R + +R AQKREE+LL S +Y +G+ ++Q++ + G
Sbjct:  506 EAYTKKTLSKFQDKYLVALQDCKTKLKEKQDKIESLEQRSVSERAAQKREERLLSSTIYELGLAIMQNKLKGG 578          
BLAST of NO01G01520 vs. NCBI_GenBank
Match: GAX27680.1 (hypothetical protein FisN_13Hh225 [Fistulifera solaris])

HSP 1 Score: 68.6 bits (166), Expect = 9.400e-8
Identity = 53/170 (31.18%), Postives = 88/170 (51.76%), Query Frame = 0
Query:   15 ALVQWINSFGPLPPGATSPSSAPPPLIKLEQLTDGLVLADVLHDIAPTRFPRDLLARPLSSSAASTPTTPTANWALALTNLKKLMRLLEAHYEEELGLHLHGGRGGNSYFASLDLAGIAREKRNKDIIRLVELVVLAAVRAPAPEKARAYIERIMGLSPEAQAFLKESVE 185
            A+++++ SF       ++ S +P  ++   +L+DG+V+ + L +IAP+ F    +AR L             NW L  +N++KL+R L+  ++E+L           + FA++D   IARE     +  LVELV  AAV   +      YI+RIM +SPE Q  +K  +E
Sbjct:    9 AMIEFLASF-------STVSQSPADIL---ELSDGVVVFEALSEIAPSYFDPTTIARHLGE-----------NWVLKSSNIRKLVRNLQQFFQEDL--------KKTADFAAIDQTKIAREADADAVASLVELVAAAAVTCSSKGD---YIQRIMQMSPEGQLAMKGVIE 146          

HSP 2 Score: 56.6 bits (135), Expect = 3.700e-4
Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = 0
Query:  653 EEYAKKTLRTVQEKYVQTLGDLKGSNTEYKARNQALEARLLEDRQAQKREEKLLMSCVYGIGMEMLQSERREG 726
            E Y KKTL   Q+KY+  L D K    E + + ++LE R + +R AQKREE+LL S +Y +G+ ++Q++ + G
Sbjct:  506 EAYTKKTLSKFQDKYLVALQDCKTKLKEKQDKIESLEQRSVSERAAQKREERLLSSTIYELGLAIMQNKLKGG 578          
BLAST of NO01G01520 vs. NCBI_GenBank
Match: GAN06049.1 (HOOK-domain-containing protein, partial [Mucor ambiguus])

HSP 1 Score: 67.8 bits (164), Expect = 1.600e-7
Identity = 54/185 (29.19%), Postives = 90/185 (48.65%), Query Frame = 0
Query:    1 MITKEEEDTTATAEALVQWINSFGPLPPGATSPSSAPPPLIKLEQLTDGLVLADVLHDIAPTRFPRDLLARPLSSSAASTPTTPTANWALALTNLKKLMRLLEAHYEEELGLHLHGGRGGNSYFASLDLAGIAREKRNKDIIRLVELVVLAAVRAPAPEKARAYIERIMGLSPEAQAFLKESVEK 186
            M+   E + +  A A++QWIN+F           +   P+ ++++L+DGL+L +V  DI P  F      + + S+          NW L   NLKKL +L+  +YEE LG+         S F  +DL  IA++   + I++L + ++ +AV  P   K   YI  I  +S   Q  +K  +E+
Sbjct:    6 MLRNSEMERSPEA-AIIQWINTF-----------TISHPVTQMQELSDGLILFEVASDIDPKWF------KSIRSADVGD------NWVLKHNNLKKLYKLVSRYYEEVLGIPF-------SNFPEIDLNAIAKDADTRVIVQLCKYILTSAVVGPNNTK---YIPEIQLMSESDQKHVKAIIEE 156          
BLAST of NO01G01520 vs. NCBI_GenBank
Match: XP_016604720.1 (hypothetical protein SPPG_07893 [Spizellomyces punctatus DAOM BR117] >KNC96680.1 hypothetical protein SPPG_07893 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 67.8 bits (164), Expect = 1.600e-7
Identity = 53/177 (29.94%), Postives = 82/177 (46.33%), Query Frame = 0
Query:    8 DTTATAEALVQWINSFGPLPPGATSPSSAPPPLIKLEQLTDGLVLADVLHDIAPTRFPRDLLARPLSSSAASTPTTPTANWALALTNLKKLMRLLEAHYEEELGLHLHGGRGGNSYFASLDLAGIAREKRNKDIIRLVELVVLAAVRAPAPEKARAYIERIMGLSPEAQAFLKESVE 185
            DT   A+A+V+W+N+F           S   P   ++ L D +VL D+L  I P  F             A+       NW L    LKKL +LL  +YEE LG +  G         + +L  IAR+    ++++L +LV+  AV+    E  + Y+ +I  LS ++Q  L  S+E
Sbjct:    8 DTDCLADAVVEWVNTF----------DSISRPCRSIKDLADAVVLTDILSQIDPQWF------------KAARAAEYGDNWVLRFNGLKKLHKLLMGYYEEVLGQNSAG-------LETPNLTAIARDADILELLKLAQLVIALAVQC---ENNQRYVMKIQSLSQDSQHALMLSIE 152          
BLAST of NO01G01520 vs. NCBI_GenBank
Match: XP_018525657.1 (PREDICTED: LOW QUALITY PROTEIN: protein Hook homolog 1-like [Lates calcarifer])

HSP 1 Score: 67.0 bits (162), Expect = 2.700e-7
Identity = 50/180 (27.78%), Postives = 85/180 (47.22%), Query Frame = 0
Query:    6 EEDTTATAEALVQWINSFGPLPPGATSPSSAPPPLIKLEQLTDGLVLADVLHDIAPTRFPRDLLARPLSSSAASTPTTPTANWALALTNLKKLMRLLEAHYEEELGLHLHGGRGGNSYFASLDLAGIAREKRNKDIIRLVELVVLAAVRAPAPEKARAYIERIMGLSPEAQAFLKESVEK 186
            +++ TA  E+L+ W+ +F           + P P   +E+LT G  ++  LH I P  F    L R          T    NW L + NLKK+++++  +Y E LG  +       S F   DLA +A      ++ RL++L++  AVR    E+ + YI+ IM L    Q  +  ++++
Sbjct:    2 DDNKTALVESLIIWLQTF-----------NTPAPCRTVEELTTGAAISQALHKIDPAWFTDGWLGR--------IKTDVEDNWRLKMNNLKKILQMVVDYYNEVLGQEI-------SDFPLPDLALVAEHSNPVELGRLLQLILGCAVRC---ERKQEYIQIIMTLEESVQHVVMTAIQE 152          
The following BLAST results are available for this feature:
BLAST of NO01G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 17
Match NameE-valueIdentityDescription
CBJ27758.18.200e-2035.04conserved unknown protein [Ectocarpus siliculosus][more]
XP_012200183.14.800e-1224.27hypothetical protein SPRG_06068 [Saprolegnia paras... [more]
XP_008613226.18.200e-1224.28hypothetical protein SDRG_09091 [Saprolegnia dicli... [more]
OQR88859.15.000e-923.36hook domain-containing protein [Achlya hypogyna][more]
XP_001269416.13.200e-831.40microtubule binding protein HOOK3, putative [Asper... [more]
GAX27219.13.200e-831.76hypothetical protein FisN_13Lh225 [Fistulifera sol... [more]
GAX27680.19.400e-831.18hypothetical protein FisN_13Hh225 [Fistulifera sol... [more]
GAN06049.11.600e-729.19HOOK-domain-containing protein, partial [Mucor amb... [more]
XP_016604720.11.600e-729.94hypothetical protein SPPG_07893 [Spizellomyces pun... [more]
XP_018525657.12.700e-727.78PREDICTED: LOW QUALITY PROTEIN: protein Hook homol... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01520.1NO01G01520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|230918gene_129Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01520.1NO01G01520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01520 ID=NO01G01520|Name=NO01G01520|organism=Nannochloropsis oceanica|type=gene|length=4022bp
TCGTAGTTTTTGTAGTTGGTCTGTGATGGGTGTGCGTAGGTTAGGGCGAG
GGGGGAGTTGTGTCTCATAAGCAAAAATGGCATGAGAGATGATACGGCGC
AGGTAAAGCACGCCGTCGAAGCGTCGTTCCAACACCTCTCAGGGGTGTGC
TGTGGCACTGGAAGGGCGTGAGGTGGTGGAGCCGTCTCAAGCTCTGTCGC
TTCTTGTGCTTGAGGTCCCATTTGAAGAGGCTTGTTCCACTTCTTCCATT
CCCCCGCCGCCCCCCGCGCTTGACACTAGACCAAAAGGGACGAAAGGCGG
GGGGCGTGACCTACCAAGAATGAACTGAACACGAGCTTTAGAGTCTGAAA
GGAAGGCATAGGCACGCACTTAGACGTGGAGACCGTGCCTGCAAATGCGG
CCACCTCAGCTTTTGGTATCGGGATGGGGATCGTTGCCATCGCTGAAGCG
ACGATGCCGTTGCGGCAACAAGGTGTGGGTGGCTCCGCTTTATGAGATTC
CACACCCACAAGGCCACAAACAGCCCCCTCTGACGGCAGTGTGACAGTCC
CCTAGCTCACCCGTTGATATAGTCGTAGAATGAAGAGCGGATTGCCGAGA
GTTGGTTGAATGATTGCCTGCTCTCCTCCAATGACGCTTTTTGTTGATGC
CTCTGGTGCATGGGCCCTGGTTGCTCACTTCCACACTTCCACTTCACGTC
TTACTCGCCACGCCCCAGTTCTCACGAGCCAATTAGCTACAGGAACGAAA
TTAAGAGCAACCTTGCACCTTCTCACTTCGCATGTAGTCGGAGCTCTTCC
TGGTTCCATCATGCATCCTCCCAATATTTGCATTATCCACTCCGCACAAC
CACCTCACCCCCACACTCTCACACGACCAAAGTACTCCAATGATTACAAA
GGAAGAAGAAGACACCACTGCGACAGCCGAGGCCTTAGTGCAGTGGATCA
ATTCCTTCGGCCCCCTCCCTCCCGGTGCCACCTCTCCTTCTTCCGCCCCT
CCTCCCCTCATAAAGCTCGAGCAACTTACTGACGGCCTCGTGTTGGCCGA
CGTCCTCCATGACATTGCCCCCACCCGCTTCCCACGAGACCTGCTCGCGC
GCCCTCTTTCCTCCTCGGCTGCCTCAACCCCGACCACGCCCACGGCGAAT
TGGGCCTTAGCATTGACAAATCTCAAGAAATTAATGCGCCTCCTCGAGGC
ACATTACGAAGAAGAACTCGGTCTACACCTTCACGGCGGACGAGGCGGCA
ACAGCTACTTTGCCTCGCTAGATCTTGCGGGAATCGCCCGGGAAAAACGC
AATAAGGATATTATCAGGCTTGTGGAGTTGGTTGTCTTGGCAGCAGTCCG
GGCGCCAGCCCCCGAAAAAGCACGGGCGTACATCGAGAGAATAATGGGCC
TGTCCCCCGAGGCACAAGCCTTTTTGAAAGAGAGTGTGGAGAAGACTCTG
CAACGTGCTACTTCATTCGTCTCCTCGACTTCCCCCTCCTCCTCCTTGTC
CTCGTCCTTTCTGGATACCATCTCTAGTGCAACTTCATCCTCCTTCTCTT
CCTCCCTCCCTTCCTCGTTCCCCTGTACCACCACTGCTGCATCCACAGCC
CTGGCGGCCGATCAACAAAGGGAGAACGCGCATTTGCATGAAACCATCCA
GGAGCTACAATTACGTTTAGCCAAGGCTGAGGAGGAAGTACTGGTCGTAA
AGGAGGAAGCGAGGGGGTGGAAGGGAGAAGTGGAGGGGCAACGCCACCGC
TTGACAGCAGCTGTAGCTCGAGCAGAGGAAGCACAGAAGGCGAGCGAGAA
ATGGAGGGTGAGACTGGAGGCGAAAGAGCTAGAAGGAGAGCATTGGAGAC
AGGAAGCAAGGAGGTGGGAGGACCGGGTGAAGGGGGAGAGGGAGAGAGCG
GATAGAGCGGAGGAGGGGAGGAGGAGGCTGGCGGATGAGGTGGATGTGTT
GCGGGAGAAAGgtgaggagggaggaagggaaggaggaagggaggtaggca
gggaggaaagaaaggaaggaaaaaatgagggaatgatttatctttttatc
ctatcaagcctcatgcgatggggctaaagagaggcgttgcaatatgtctt
accctccctccctccctccctccctccctccctccctccctccctccctc
taccacagCGGACGCCGCCCATGACTTGGAGCAGATCCTTGAGAAATACA
AACTCCGACTCGAACAGGCTGCTATGGCCAAGCAGCACTACCGCGATCTA
GAGGAGCAAAACGCCAAATACCTGGATCAGGTGCTGGCGTTGGAGGCAGA
GGCAAAAGCGAGTGTCCCGAGCCTCAAGAGAGCGATCGAGCAGTACAAGG
ATCAAGTAGTCGGGCTGGAGAGGGACCGTTACCAGGCCATGGAACGGAGG
GAGGTCATGGAGGGGGAGTTGGAGAGGGCGAAGGAGGAGGTGGAGGGCGC
GAGGGAGGCACGGCGGTTCCTGATGGAGGAATGTCAGGAATTGAAACGGG
TCGTGCAGCAGCTACATCTGCAGCAGGAGCAGCCGCAGGGATCGCAGGAG
GGACAGCCGCAATTACCGGGCGGAGGAAGGTCAGGAGAGGAGGAAAGGGA
TGAAGGAGGTTTGGCTTTGTTTGAGGATGCCTGGGACAATAAAGAGAAAT
TGCTGCGGCTGGAGCGAGAGAATAGGATGTTACGAAAACAGGTGGAGGAC
GGGGGCTGGCCGAGGGTAGGGGAGGGAGAGGACCTCTTGCTGCTGAAATC
GCAAATGCAGGATCTACGGAGGGTGAAGGAGGAGAGGGAGGCTGAGGCAA
TAGCGGCTAAGAAGAGAACAGCCGAATTGGAGGGGAACGTGGCTATGCTG
AGAGGGCAGTGTGAGGAGATGGAGGAAGAGGTGGGTAGGATGAAGGAGGA
GGGGGTCGGAAGAGCAGCGGCAGCAGCTGCAGCAGCTGTAGAAGGAAAAG
AGAAGGCATTGGCGCGCGTGCAGCTCTTGCTACAGCAAGAGAAGGAGTGG
GAGGAGCAGGTGCTGAGATTAAAGGGGGAAAAGGATCGGTTGGAGGAATA
CGCCAAAAAGACGTTAAGGACGGTACAGGAGAAATATGTGCAGACGTTGG
GGGATTTGAAAGGGAGCAACACTGAGTATAAAGCCAGAAATCAGGCGTTG
GAAGCACGGTTATTGGAAGACAGGCAAGCGCAGAAGAGGGAGGAGAAGCT
GCTGATGTCGTGTGTGTATGGGATTGGCATGGAGATGCTGCAGTCTGAAA
GGAGGGAGGGAGGGAGGAAGGGTTGAGGAGGGAGAAAGGAGACAAATTTG
CATGTGCTGTACGTATGTGTGTGTGAGGCTTACTGTGAGTATTTGAGTGG
AGGAAGGGGATGAGAGAAGGAGGGAGGAAGAAAAGAAAGATCAGAAGAAA
AACGGACAAAGCTAGACACTGCCTTGGAGATTTGAAAATATAAAAGTAAG
TGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGTGAGTGTGTGCGAGAGAG
AAAGAAAGAGAGAGAGAGAATGCATGCGAGTGTGCATAACAGGGGAAAAA
TCCATAAGAGCAAGAAAGTAAGAACGACAATTGCAGAAGATAGCCTCGGA
AGATTTCACCCTTGTAACATTTTTGGTGTCCTGTTGCCAAGCTTCAAGCA
AACAAACACTGGGGCGGTTTGCCACCGCCTTATTAGTTATTATCTTCGAC
GCAGCGAACGCTATAAATCCCCAAGCGTATATTTCATCACCAGCAGCATC
ATCATTCCCCGTATCGCATGCAAGTGTTGTCACACTGTGAACTTCCACAC
AAAGTGTGAGTTAGTCCCCCGGTAGAAACCCTTTGATATGCGCAGCAGCT
GGATGGTGGCGGCACTTTGGAAGCTTCGGTTGGATGCTGGCTGCAAGCTC
TTGAGCGTGTCATCCATTTCGTCTTTCTGTATGATGGATGCGAGACGTGA
TACGGTGAATTGTGGGAAGTGG
back to top

protein sequence of NO01G01520.1

>NO01G01520.1-protein ID=NO01G01520.1-protein|Name=NO01G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=730bp
MITKEEEDTTATAEALVQWINSFGPLPPGATSPSSAPPPLIKLEQLTDGL
VLADVLHDIAPTRFPRDLLARPLSSSAASTPTTPTANWALALTNLKKLMR
LLEAHYEEELGLHLHGGRGGNSYFASLDLAGIAREKRNKDIIRLVELVVL
AAVRAPAPEKARAYIERIMGLSPEAQAFLKESVEKTLQRATSFVSSTSPS
SSLSSSFLDTISSATSSSFSSSLPSSFPCTTTAASTALAADQQRENAHLH
ETIQELQLRLAKAEEEVLVVKEEARGWKGEVEGQRHRLTAAVARAEEAQK
ASEKWRVRLEAKELEGEHWRQEARRWEDRVKGERERADRAEEGRRRLADE
VDVLREKADAAHDLEQILEKYKLRLEQAAMAKQHYRDLEEQNAKYLDQVL
ALEAEAKASVPSLKRAIEQYKDQVVGLERDRYQAMERREVMEGELERAKE
EVEGAREARRFLMEECQELKRVVQQLHLQQEQPQGSQEGQPQLPGGGRSG
EEERDEGGLALFEDAWDNKEKLLRLERENRMLRKQVEDGGWPRVGEGEDL
LLLKSQMQDLRRVKEEREAEAIAAKKRTAELEGNVAMLRGQCEEMEEEVG
RMKEEGVGRAAAAAAAAVEGKEKALARVQLLLQQEKEWEEQVLRLKGEKD
RLEEYAKKTLRTVQEKYVQTLGDLKGSNTEYKARNQALEARLLEDRQAQK
REEKLLMSCVYGIGMEMLQSERREGGRKG*
back to top
Synonyms
Publications