NO01G01480, NO01G01480 (gene) Nannochloropsis oceanica

Overview
NameNO01G01480
Unique NameNO01G01480
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2199
Alignment locationchr1:373743..375941 -

Link to JBrowse

Properties
Property NameValue
DescriptionThreonine synthase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:373743..375941 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR029144Thr_synth_N
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
BLAST of NO01G01480 vs. NCBI_GenBank
Match: EWM29080.1 (threonine synthase [Nannochloropsis gaditana])

HSP 1 Score: 817.0 bits (2109), Expect = 4.700e-233
Identity = 497/617 (80.55%), Postives = 540/617 (87.52%), Query Frame = 0
Query:   73 AGPQYPPTHRGVLYCSTRGARRDVTFEEVVMSGLAPDKGLYVPQEIPYISLEQLEKLRDASFVELANYIMRLFIGPEDIPPENLRVLIESSTKYFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNMFEYFLAKKKGGPDAKLTVLGATSGDTGSAAIHGLRGKKNIQVFVLYPKGRVSEVQERQMTTVLDRNVHCIAVEGATFDDCQDIVKAAFQDEGFRDNANLGAVNSINWARVLAQITYFFHAYFRVLAKNEKAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPKLSFSVPTGNFGDALAGYYAKAMGLPIDKILVATNENDILHRFFTSGKYWKKEVQATLSPSMDISICSNFERLLFDLAGRDPELLREWMEEFERTKKLTLPPPTLAKAREDFISCRVDQPAMIEVMLSFLRDYNYLLCPHSAVGVTAAKQLAMLNADTICLATAHHAKFLDATLKHFPLDEVDVEEIEEEVPTQLRDLDHLPTRYVTLPASAYYVKKYVLQTLEGKDNAALLRWLALGGWV 690
            +GPQYPPTHRGVLYCSTRG  RDVTFEEVVM GLAPDKGLYVPQE+PYI  EQLEKLRDASFVELANYIMRL +GPEDIPPENLRVLIE STK FRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGN+FEYF+AKKKG PD KLTVLGATSGDTGSAAI GLRGKKN+ VFVLYPKGRVSEVQERQMTTVLD+NVHCIAVE ATFDDCQ I+K+AFQD+ FR+   LGAVNSINWARVLAQ+TY+F AYFRVLA+NE+A                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          TGNFGDALAGYYAKAMGLPIDKIL+ATNENDILHRFF++GKYW++EV  TLSPSMDI+I SNFERLL+ LAGRDP+LLREWMEEFERT +LTLPPPTLAKAREDF+SCRVD+P M+E MLSFLR+++YLLCPHSAVGV AAK L ML+A T+CLATAH  KFLDATLKH P++  +VEEIEE++PTQLR+LDHLPTR VTLPASA+YV+KY+LQTLEGKDN ALLRWL + G +
Sbjct:   77 SGPQYPPTHRGVLYCSTRGGCRDVTFEEVVMGGLAPDKGLYVPQELPYIPPEQLEKLRDASFVELANYIMRLVVGPEDIPPENLRVLIECSTKNFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNVFEYFMAKKKGDPDVKLTVLGATSGDTGSAAIEGLRGKKNVNVFVLYPKGRVSEVQERQMTTVLDKNVHCIAVENATFDDCQSIIKSAFQDKEFREKVCLGAVNSINWARVLAQVTYYFFAYFRVLAQNERA---------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGNFGDALAGYYAKAMGLPIDKILIATNENDILHRFFSNGKYWRREVHPTLSPSMDIAISSNFERLLYHLAGRDPDLLREWMEEFERTGRLTLPPPTLAKAREDFVSCRVDEPVMLETMLSFLREHHYLLCPHSAVGVAAAKGLDMLDAHTVCLATAHPGKFLDATLKHLPVEVAEVEEIEEDMPTQLRELDHLPTRSVTLPASAFYVQKYILQTLEGKDNQALLRWLEMAGLI 666          
BLAST of NO01G01480 vs. NCBI_GenBank
Match: EWM25414.1 (threonine synthase [Nannochloropsis gaditana])

HSP 1 Score: 499.2 bits (1284), Expect = 2.200e-137
Identity = 278/591 (47.04%), Postives = 351/591 (59.39%), Query Frame = 0
Query:   86 YCSTRGARRDVTFEEVVMSGLAPDKGLYVPQEIPYISLEQLEKLRDASFVELANYIMRLFIGPEDIPPENLRVLIESSTKYFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNMFEYFLAKKKGGPDAKLTVLGATSGDTGSAAIHGLRGKKNIQVFVLYPKGRVSEVQERQMTTVLDRNVHCIAVEGATFDDCQDIVKAAFQDEGFRDNANLGAVNSINWARVLAQITYFFHAYFRVLAKNEKAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPKLSFSVPTGNFGDALAGYYAKAMGLPIDKILVATNENDILHRFFTSGKYWKKEVQATLSPSMDISICSNFERLLFDLAGRDPELLREWMEEFERTKKLTLPPPTLAKAREDFISCRVDQPAMIEVMLSFLRDYNYLLCPHSAVGVTAAKQLAML-NADTICLATAHHAKFLDATLKHFPLDEVDVEEIEEEVPTQLRDLDHLPTRYVTLPASAYYVKKYVLQTLEGKD 676
            YCSTRG  ++ TFE+VV+ GLAPD+GLYVP+ +P ++  +L+ +R  +F  LA  I+  F+G EDIP ++L+ +I+ S   FR  +V+PV+++G  W+LELFHGPTFAFKDVALQ LGN+FEYFL+K+ G  +A LT+LGATSGDTGSAAI+GLRGK N++ F+LYPKGR S +QERQMTTV D+NV CIAVEG TFDDCQ+IVKAAFQD  FR+   LGAVNSINWARVLAQITY+F AYFR+                                                                                                                    S+ +LSFSVPTGNFGD LAGYYAK MGLP++++LVATN NDILHRFF +G+Y K EV  T SPSMDISI SNFER L++LA RD  LL++WM  FE T +LTL    L +AR+DFIS R D+   +  +  +  D+ YLLCPHSAVGV AA  L ML +  T+CLATAH AKF +AT         +   IE ++P +L  L  +P R + L      V+ YV   ++  D
Sbjct:    9 YCSTRGCVKNATFEDVVLGGLAPDRGLYVPEVLPTLTPVELQAMRCLTFPNLAYAIVSRFVGEEDIPAKDLKDIIDRSYSTFRSPDVSPVKQLGSAWILELFHGPTFAFKDVALQLLGNLFEYFLSKRSGA-EAFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCIAVEG-TFDDCQNIVKAAFQDASFREEVRLGAVNSINWARVLAQITYYFWAYFRI---------------------------------------------------------------------------------------------------------------TDFDPSIEQLSFSVPTGNFGDVLAGYYAKRMGLPVEQLLVATNVNDILHRFFVTGEYHKAEVTQTHSPSMDISISSNFERYLYELADRDHTLLKKWMTNFEATGELTLSGQLLKRARQDFISGRGDEEQTLATIRKWHEDHGYLLCPHSAVGVHAADSLGMLRDGRTVCLATAHPAKFPEAT---------ERLGIESDLPAELAALADMPMRSILLHNDLVEVQSYVKSRIQSMD 477          
BLAST of NO01G01480 vs. NCBI_GenBank
Match: XP_005852426.1 (threonine synthase, partial [Nannochloropsis gaditana CCMP526] >EKU23407.1 threonine synthase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 477.6 bits (1228), Expect = 6.800e-131
Identity = 230/264 (87.12%), Postives = 245/264 (92.80%), Query Frame = 0
Query:   73 AGPQYPPTHRGVLYCSTRGARRDVTFEEVVMSGLAPDKGLYVPQEIPYISLEQLEKLRDASFVELANYIMRLFIGPEDIPPENLRVLIESSTKYFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNMFEYFLAKKKGGPDAKLTVLGATSGDTGSAAIHGLRGKKNIQVFVLYPKGRVSEVQERQMTTVLDRNVHCIAVEGATFDDCQDIVKAAFQDEGFRDNANLGAVNSINWARVLAQITYFFHAYFRVLAKNEKA 337
            +GPQYPPTHRGVLYCSTRG  RDVTFEEVVM GLAPDKGLYVPQE+PYI  EQLEKLRDASFVELANYIMRL +GPEDIPPENLRVLIE STK FRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGN+FEYF+AKKKG PD KLTVLGATSGDTGSAAI GLRGKKN+ VFVLYPKGRVSEVQERQMTTVLD+NVHCIAVE ATFDDCQ I+K+AFQD+ FR+   LGAVNSINWARVLAQ+TY+F AYFRVLA+NE+A
Sbjct:   77 SGPQYPPTHRGVLYCSTRGGCRDVTFEEVVMGGLAPDKGLYVPQELPYIPPEQLEKLRDASFVELANYIMRLVVGPEDIPPENLRVLIECSTKNFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNVFEYFMAKKKGDPDVKLTVLGATSGDTGSAAIEGLRGKKNVNVFVLYPKGRVSEVQERQMTTVLDKNVHCIAVENATFDDCQSIIKSAFQDKEFREKVCLGAVNSINWARVLAQVTYYFFAYFRVLAQNERA 340          
BLAST of NO01G01480 vs. NCBI_GenBank
Match: CBN76262.1 (Threonine synthase [Ectocarpus siliculosus])

HSP 1 Score: 477.2 bits (1227), Expect = 8.800e-131
Identity = 268/588 (45.58%), Postives = 342/588 (58.16%), Query Frame = 0
Query:   86 YCSTRGARRDVTFEEVVMSGLAPDKGLYVPQEIPYISLEQLEKLRDASFVELANYIMRLFIGPEDIPPENLRVLIESSTKYFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNMFEYFLAKKKG-GPDAKLTVLGATSGDTGSAAIHGLRGKKNIQVFVLYPKGRVSEVQERQMTTVLDRNVHCIAVEGATFDDCQDIVKAAFQDEGFRDNANLGAVNSINWARVLAQITYFFHAYFRVLAKNEKAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPKLSFSVPTGNFGDALAGYYAKAMGLPIDKILVATNENDILHRFFTSGKYWKKEVQATLSPSMDISICSNFERLLFDLAGRDPELLREWMEEFERTKKLTLPPPTLAKAREDFISCRVDQPAMIEVMLSFLRDYNYLLCPHSAVGVTAAKQLAMLNADTICLATAHHAKFLDATLKHFPLDEVDVEEIEEEVPTQLRDLDHLPTRYVTLPASAYYVKKYVLQTLE 673
            YCSTRG  + V+FE VV+ GLA D+GLYVP+ +P +S ++L + R  +F ELA  IM  +I  E+IP ++L  L + S   FR  EV PV +VG  WVLELFHGPTFAFKDVALQFLGN+FEYFL +++  G +A LT+LGATSGDTGSAAI+GLRGK ++  F+++P+GRVSE+QERQMTTV D N+HC++VEG +FDDCQDIVKAAF D+ FR+   LGAVNSINWARVLAQ+TY+F A+FRV    E A +                                                                                                               LS+SVPTGNFGD LAGYYAK MGLP+D+++VA NENDILHRFF++GKYW++ V  TL+PSMDI + SNFER LF L+G D E+L  W++ FE T +LTL    L +A+  F S RV     +  +  F  + +YLLCPHS+VG  A  QL M    T+ LATAH AKF DA  K  P    D+       P  L+ L  LPTR   +P     V++++L+TL+
Sbjct:   17 YCSTRGGAKGVSFENVVLGGLAEDRGLYVPEVLPSVSAQELAEWRKLAFPELAFKIMSKYISTEEIPSDDLLDLCKRSATNFRTEEVTPVVRVGKAWVLELFHGPTFAFKDVALQFLGNLFEYFLLRRRAKGEEAGLTILGATSGDTGSAAIYGLRGKAHVNCFIMFPEGRVSEIQERQMTTVPDANIHCVSVEG-SFDDCQDIVKAAFADKPFREEVKLGAVNSINWARVLAQMTYYFWAHFRVSEALEAAGEPLEEGSG--------------------------------------------------------------------------------------------------------LSYSVPTGNFGDVLAGYYAKRMGLPVDRLVVAVNENDILHRFFSTGKYWREGVVPTLAPSMDICVSSNFERYLFHLSGDDGEVLAGWLKSFEATGQLTLEGELLDQAQSAFSSSRVVTEDNLATIKQFWDEKSYLLCPHSSVGAKAPLQLGMPEGKTVVLATAHPAKFPDAVKKVVP----DL----PPAPEALQVLWDLPTRSTKMPNDLKKVEEFMLETLK 491          
BLAST of NO01G01480 vs. NCBI_GenBank
Match: XP_002183750.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44932.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 459.5 bits (1181), Expect = 1.900e-125
Identity = 256/584 (43.84%), Postives = 327/584 (55.99%), Query Frame = 0
Query:   84 VLYCSTRGARRDVTFEEVVMSGLAPDKGLYVPQEIPYISLEQLEKLRDASFVELANYIMRLFIGPEDIPPENLRVLIESSTKYFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNMFEYFLAKKKGGPDAKLTVLGATSGDTGSAAIHGLRGKKNIQVFVLYPKGRVSEVQERQMTTVLDRNVHCIAVEGATFDDCQDIVKAAFQDEGFRDNANLGAVNSINWARVLAQITYFFHAYFRVLAKNEKAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPKLSFSVPTGNFGDALAGYYAKAMGLPIDKILVATNENDILHRFFTSGKYWKKEVQATLSPSMDISICSNFERLLFDLAGRDPELLREWMEEFERTKKLTLPPPTLAKAREDFISCRVDQPAMIEVMLSFLRDYNYLLCPHSAVGVTAAKQLAMLNADTICLATAHHAKFLDATLKHFPLDEVDVEEIEEEVPTQLRDLDHLPTRYVTLPASAYYVKKYV 668
            V Y STRG + ++ F +VVM GLA D+GL+VP  +P +S  +LE  R  S+ ELA  ++  F+G + +P  NLR ++  S   FR  +V P+  VG  +VLELFHGPTFAFKDVALQ LGN FEYFL+    G   +L VLGATSGDTGSAAI GLRGKK I   +L+P GRVS +QERQMTTV D NVHC+A++G TFDDCQDIVKA+F    FRD  +LGAVNSINW RVLAQ TY++ +Y RV   ++                                                                                                                +P++ FSVPTGNFGD LAGYYAK MGLP+ K++VATNENDILHRFFT+G+Y ++ +  T+SPSMDI + SNFER LF LAG D  +L  WM+ FE+T +LT+    L +A+ DF SCR D    +  + ++ + + Y+LCPHSAVGV A  QL+++++ T+CLATAH AK        FP     V E     PT+L  L  LPTR V LP     V+ +V
Sbjct:    4 VTYSSTRGGQTNLAFRDVVMQGLAHDRGLFVPDRLPTVSTTELESWRSLSYAELAVNVIAKFVGDDQVPLPNLRDIVTRSCAAFRDAQVTPLVHVGGHYVLELFHGPTFAFKDVALQMLGNFFEYFLSTGSNG--GRLAVLGATSGDTGSAAIAGLRGKKGITCVILFPNGRVSAIQERQMTTVPDENVHCVAIDG-TFDDCQDIVKASFNTPAFRDKVHLGAVNSINWCRVLAQTTYYYWSYLRVTDAHK---------------------------------------------------------------------------------------------------------------DIPEVHFSVPTGNFGDVLAGYYAKQMGLPVGKLIVATNENDILHRFFTAGEYHRESIAETISPSMDICVSSNFERYLFHLAGNDASMLSAWMQAFEKTGQLTIQGDLLRQAQADFDSCRGDTSQTLATIETYHQKHQYVLCPHSAVGVYAIHQLSLVSSATVCLATAHEAK--------FPAAVAQVVEPMPPPPTELAVLRDLPTRRVELPNDLATVQAFV 465          
BLAST of NO01G01480 vs. NCBI_GenBank
Match: GAX21624.1 (threonine synthase [Fistulifera solaris])

HSP 1 Score: 440.3 bits (1131), Expect = 1.200e-119
Identity = 250/590 (42.37%), Postives = 318/590 (53.90%), Query Frame = 0
Query:   84 VLYCSTRGARRDVTFEEVVMSGLAPDKGLYVPQEIPYISLEQLEKLRDASFVELANYIMRLFIGPEDIPPENLRVLIESSTKYFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNMFEYFLAKKKGGPDAKLTVLGATSGDTGSAAIHGLRGKKNIQVFVLYPKGRVSEVQERQMTTVLDRNVHCIAVEGATFDDCQDIVKAAFQDEGFRDNANLGAVNSINWARVLAQITYFFHAYFRVLAKNEKAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPKLSFSVPTGNFGDALAGYYAKAMGLPIDKILVATNENDILHRFFTSGKYWKKEVQATLSPSMDISICSNFERLLFDLAGRDPELLREWMEEFERTKKLTLPPPTLAKAREDFISCRVDQPAMIEVMLSFLRDYNYLLCPHSAVGVTAAKQLAMLNADTICLATAHHAKFLDATLKHFPLDEVDVEEIEEEVPTQLRDLDHLPTRYVTLPASAYYVKKYVLQTLEG 674
            V Y STRG ++ + F  VVM GLA D+GL+VP EIP +S E+L   RD S+ +L+  I R F+  + +P   L+ +I  S   FR  +V PV +V    VLELFHGPT AFKDVALQ LGN FEYFL    G    +LTVLGATSGDTGSAAI GLRGK+ +   +LYP GRVS  QE QM TV D NV  +AV+ ATFDDCQD VKA+F    FRD  +LGAVNSINW RVLAQ TY++ +YFRV + N +                                                                                                                   SFSVPTGNFGD LAG+Y+K MGLP+DK++VATNENDILHRFFT+GKY ++ +Q T+SPSMDI + SNFER LF L G DP  L++WM +FE+T  L++ P  L +A+ DF+S RV+    I V+  + + +NYLLCPHSAVGV A   L +++  T+CLATA   KF DA  +            +   P +++ L+ LP R   L      V+ +V   + G
Sbjct:    4 VTYSSTRGGQKKLDFRTVVMQGLAHDRGLFVPDEIPTVSAEELAAWRDLSYPDLSVQIFRKFVKEDQVPLSVLKDIIHRSCAAFRHPDVTPVIQVNGHAVLELFHGPTLAFKDVALQMLGNFFEYFL--DTGSNGGQLTVLGATSGDTGSAAIAGLRGKRGVSCIILYPHGRVSHRQELQMITVPDENVFAVAVKDATFDDCQDFVKASFNTPAFRDKVHLGAVNSINWCRVLAQTTYYYWSYFRVTSSNAET-----------------------------------------------------------------------------------------------------------------ASFSVPTGNFGDILAGFYSKQMGLPVDKLVVATNENDILHRFFTTGKYERESIQETISPSMDICVSSNFERYLFWLTGNDPAKLKQWMTDFEKTNALSVSPAELRQAQGDFLSSRVNTDETIRVIGDYHKSHNYLLCPHSAVGVKAIHNLKLVSPRTVCLATADQGKFPDAVRRAVQ---------DPPTPDEIQALEKLPIRRFELAKDLKKVQNFVESRVSG 469          
BLAST of NO01G01480 vs. NCBI_GenBank
Match: XP_002293628.1 (threonine synthase [Thalassiosira pseudonana CCMP1335] >EED89364.1 threonine synthase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 439.9 bits (1130), Expect = 1.600e-119
Identity = 248/594 (41.75%), Postives = 328/594 (55.22%), Query Frame = 0
Query:   80 THRGVLYCSTRGARRDVTFEEVVMSGLAPDKGLYVPQEIPYISLEQLEKLRDASFVELANYIMRLFIGPEDIPPENLRVLIESSTKYFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNMFEYFLAKKKGGPDAKLTVLGATSGDTGSAAIHGLRGKKNIQVFVLYPKGRVSEVQERQMTTVLDRNVHCIAVEGATFDDCQDIVKAAFQDEGFRDNANLGAVNSINWARVLAQITYFFHAYFRVLAKNEKAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPKLSFSVPTGNFGDALAGYYAKAMGLPIDKILVATNENDILHRFFTSGKYWKKEVQATLSPSMDISICSNFERLLFDLAGRDPELLREWMEEFERTKKLTLPPPTLAKAREDFISCRVDQPAMIEVMLSFLRDYNYLLCPHSAVGVTAAKQLAMLNADTICLATAHHAKFLDA-TLKHFPLDEVDVEEIEEEVPTQLRDLDHLPTRYVTLPASAYYVKKYVLQTLE 673
            T   + Y STRG++ +++F   VM+GLA D+GL+VP   P +S  +LE  R  S+ +LA  ++  ++G +++P + L  ++  S   FR  +V P+ KV   +VLELFHGPTFAFKDVALQ LGN FEYFL+    G   +L VLGATSGDTGSAAI+GLRGKK +   +L+P GRVSE+QERQMTTV D N+HC++VEG TFDDCQDIVKA+F +  FR+   LGAVNSINW RVLAQ TY+F +Y RV    +                                                                                                                + K++FSVPTGNFGD LAGYYAK MGLP+  ++VATNENDILHRFFT G+Y ++++  T+SPSMDI + SNFER L+ LAG D   L  WM  FE T KLT+    L +AR DF S R D    +E +  +  +++Y+LCPHSAVGV+A  QL   N+ T+ LATAH AKF DA ++   PL          ++P +L  L ++ TR    P  A  V+ ++ + +E
Sbjct:    2 TSPSITYSSTRGSQSNLSFRTAVMTGLAHDRGLFVPDTFPTVSTSELESWRGLSYADLATEVIAKYVGEDEVPRKVLGDIVRRSCGSFRSGDVTPLVKVDGHYVLELFHGPTFAFKDVALQMLGNFFEYFLSTGSNG--GRLAVLGATSGDTGSAAIYGLRGKKGVDCIILFPDGRVSEIQERQMTTVKDGNIHCVSVEG-TFDDCQDIVKASFDNMEFRNKVKLGAVNSINWCRVLAQTTYYFWSYLRVTDAEK---------------------------------------------------------------------------------------------------------------DVTKVNFSVPTGNFGDILAGYYAKRMGLPVGDLIVATNENDILHRFFTHGEYHREDIHKTISPSMDICVSSNFERYLYHLAGDDSTTLASWMSAFESTGKLTITGKKLDQARADFKSARADTANTLETIKRYHSEFDYVLCPHSAVGVSAIHQLDTANSATVALATAHFAKFGDAVSMAINPL---------PDIPKELSRLWNMETRKSNCPNDATVVQAFMEKRIE 472          
BLAST of NO01G01480 vs. NCBI_GenBank
Match: GAX14851.1 (threonine synthase [Fistulifera solaris])

HSP 1 Score: 438.7 bits (1127), Expect = 3.500e-119
Identity = 250/590 (42.37%), Postives = 317/590 (53.73%), Query Frame = 0
Query:   84 VLYCSTRGARRDVTFEEVVMSGLAPDKGLYVPQEIPYISLEQLEKLRDASFVELANYIMRLFIGPEDIPPENLRVLIESSTKYFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNMFEYFLAKKKGGPDAKLTVLGATSGDTGSAAIHGLRGKKNIQVFVLYPKGRVSEVQERQMTTVLDRNVHCIAVEGATFDDCQDIVKAAFQDEGFRDNANLGAVNSINWARVLAQITYFFHAYFRVLAKNEKAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPKLSFSVPTGNFGDALAGYYAKAMGLPIDKILVATNENDILHRFFTSGKYWKKEVQATLSPSMDISICSNFERLLFDLAGRDPELLREWMEEFERTKKLTLPPPTLAKAREDFISCRVDQPAMIEVMLSFLRDYNYLLCPHSAVGVTAAKQLAMLNADTICLATAHHAKFLDATLKHFPLDEVDVEEIEEEVPTQLRDLDHLPTRYVTLPASAYYVKKYVLQTLEG 674
            V Y STRG ++ + F  VVM GLA D+GL+VP EIP +S E+L   RD S+ +L+  I R F+  + +P   L+ +I  S   FR  +V PV +V    VLELFHGPT AFKDVALQ LGN FEYFL    G    +LTVLGATSGDTGSAAI GLRGK+ +   +LYP GRVS  QE QM TV D NV  +AV+ ATFDDCQD VKA+F    FRD  +LGAVNSINW RVLAQ TY++ +YFRV + N +                                                                                                                   SFSVPTGNFGD LAG+Y+K MGLP+DK++VATNENDILHRFFT+GKY ++ +Q T+SPSMDI + SNFER LF L G DP  L++WM +FE+T  L++ P  L +A+ DF S RV+    I V+  + + +NYLLCPHSAVGV A   L +++   +CLATA   KF DA  +            +   PT+++ L+ LP R   L      V+ +V   + G
Sbjct:    4 VTYSSTRGGQKKLDFRTVVMQGLAHDRGLFVPDEIPTVSAEELAAWRDLSYPDLSVQIFRKFVKEDQVPLSVLKDIIHRSCAAFRHPDVTPVIQVNGHAVLELFHGPTLAFKDVALQMLGNFFEYFL--DTGSNGGQLTVLGATSGDTGSAAIAGLRGKRGVSCIILYPHGRVSHRQELQMITVPDENVFAVAVKDATFDDCQDFVKASFNTPAFRDKVHLGAVNSINWCRVLAQTTYYYWSYFRVTSSNAET-----------------------------------------------------------------------------------------------------------------ASFSVPTGNFGDILAGFYSKQMGLPVDKLVVATNENDILHRFFTTGKYERESIQETISPSMDICVSSNFERYLFWLTGNDPAKLKQWMTDFEKTNVLSVSPAQLRQAQGDFFSSRVNTDETIRVIGEYHKSHNYLLCPHSAVGVKAIHNLKLVSPRMVCLATADQGKFPDAVRRAVQ---------DPPTPTEIQVLEKLPIRRFELSKDLKKVQNFVESRVSG 469          
BLAST of NO01G01480 vs. NCBI_GenBank
Match: OEU18609.1 (L-threonine synthase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 438.3 bits (1126), Expect = 4.500e-119
Identity = 247/586 (42.15%), Postives = 316/586 (53.92%), Query Frame = 0
Query:   82 RGVLYCSTRGARRDVTFEEVVMSGLAPDKGLYVPQEIPYISLEQLEKLRDASFVELANYIMRLFIGPEDIPPENLRVLIESSTKYFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNMFEYFLAKKKGGPDAKLTVLGATSGDTGSAAIHGLRGKKNIQVFVLYPKGRVSEVQERQMTTVLDRNVHCIAVEGATFDDCQDIVKAAFQDEGFRDNANLGAVNSINWARVLAQITYFFHAYFRVLAKNEKAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPKLSFSVPTGNFGDALAGYYAKAMGLPIDKILVATNENDILHRFFTSGKYWKKEVQATLSPSMDISICSNFERLLFDLAGRDPELLREWMEEFERTKKLTLPPPTLAKAREDFISCRVDQPAMIEVMLSFLRDYNYLLCPHSAVGVTAAKQLAMLNADTICLATAHHAKFLDATLKHFPLDEVDVEEIEEEVPTQLRDLDHLPTRYVTLPASAYYVKKYV 668
            + V Y STRG + ++ F  VVM+GLA D+GL+VP   P +  E+LE  R  SF ++A  ++  ++  + +P E L  +++ S   FR  EV PV  V    VLELFHGPTFAFKDVALQ LGN FEYFL  + G    +L VLGATSGDTGSAAI+GLRGKK +   +L+PKGRVS +QERQMTTV D N+HC+A+EG TFDDCQD+VK +F    FRD   LGAVNSINW RVLAQITY+F +Y RV  + E                                                                                                                  K+ +SVPTGNFGD LAG+YA+ MGLPI K++VATNENDILHRFFT G+Y ++E+  T+SPSMDI + SNFER LF+L G D   L   ME+FE TKKLT+    L KA+ DF S R D    ++++  +   +NY++CPH+AVGV+A  Q   ++   +CLATAH  KF DA      +D +         P QL  L  LPTR    P     V+ ++
Sbjct:    2 KSVTYSSTRGGQHNLDFRTVVMTGLAHDRGLFVPDTFPTVEKEELESWRSLSFPDVAVKVLSKYVKEDQVPAEKLEDIVKRSCAAFRHEEVTPVIDVAGHKVLELFHGPTFAFKDVALQMLGNFFEYFL--ETGSNGGRLAVLGATSGDTGSAAIYGLRGKKGVDCIILFPKGRVSAIQERQMTTVEDENIHCVAIEG-TFDDCQDLVKGSFNSPEFRDRVKLGAVNSINWCRVLAQITYYFWSYLRVTDQEEHKDS--------------------------------------------------------------------------------------------------------------KIKYSVPTGNFGDILAGFYARKMGLPIGKLIVATNENDILHRFFTKGEYHREEIAKTISPSMDICVSSNFERYLFNLVGNDTSKLAAMMEDFEITKKLTVTGELLEKAQSDFSSARADTSMTLDIIREYNETHNYVMCPHTAVGVSAIYQTKDVDETMVCLATAHEGKFPDAV--KMAIDPLPTP------PPQLACLLDLPTRLSECPNDLKSVQDFM 466          
BLAST of NO01G01480 vs. NCBI_GenBank
Match: PQM55080.1 (threonine synthase [Deltaproteobacteria bacterium])

HSP 1 Score: 424.5 bits (1090), Expect = 6.800e-115
Identity = 251/587 (42.76%), Postives = 322/587 (54.86%), Query Frame = 0
Query:   85 LYCSTRGARRDVTFEEVVMSGLAPDKGLYVPQEIPYISLEQLEKLRDASFVELANYIMRLFIGPEDIPPENLRVLIESSTKYFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQFLGNMFEYFLAKKKGGPDAKLTVLGATSGDTGSAAIHGLRGKKNIQVFVLYPKGRVSEVQERQMTTVLDRNVHCIAVEGATFDDCQDIVKAAFQDEGFRDNANLGAVNSINWARVLAQITYFFHAYFRVLAKNEKAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPKLSFSVPTGNFGDALAGYYAKAMGLPIDKILVATNENDILHRFFTSGKYWKKEVQATLSPSMDISICSNFERLLFDLAGRDPELLREWMEEFERTKKLTLPPPTLAKAREDFISCRVDQPAMIEVMLSFLRDYNYLLCPHSAVGVTAAKQLAMLNADTICLATAHHAKFLDATLKHFPLDEVDVEEIEEEVPTQLRDLDHLPTRYVTLPASAYYVKKYVLQTL 672
            LY STRG  +++ FEE VM GLA D+GL VP E P +   +L++     F +L+  IM+LF   + IP + L++LI+ S K FR  E+ PV  VG   +LELFHGPTFAFKDVALQFLGN+FEYFL K+       L ++GATSGDTGSAAI+GL+GK  + VF+L+PKGR+S +QE QMTTVLD N+H +A+EG TFDD Q IVKA F D  F+    LG+VNSINWAR+LAQI Y+F+A+FRV+  + +                                                                                                                  LSF VPTGNFG+ LAGYY+K MGLPIDK+++ TNENDILHRFFT G+Y K E++ T SPSMDI I SNFER LF LA +  E L+ WME FE T KLT+    L  A+ DF S  V    +I  + +F +   YLL PH+AVG+TAAK+ A       CLA AH AKF +   K          +IE E+P +L  L +L T   T+PA+   +K  +L+T+
Sbjct:    3 LYSSTRGQVKNLLFEEAVMMGLADDRGLLVPSEFPDVR-SKLQEWSSLDFTDLSLEIMQLFTSGK-IPRDELKLLIDRSYKTFRHPEITPVNSVGGIHILELFHGPTFAFKDVALQFLGNLFEYFLDKR----HHPLRIIGATSGDTGSAAINGLQGKIGVDVFMLHPKGRISPIQEMQMTTVLDPNIHNLAIEG-TFDDAQMIVKALFNDHEFKKRYFLGSVNSINWARILAQIVYYFYAWFRVVKSSHEL-----------------------------------------------------------------------------------------------------------------LSFVVPTGNFGNVLAGYYSKCMGLPIDKLVIGTNENDILHRFFTKGEYHKTELKKTFSPSMDIQISSNFERYLFXLAEKSSEKLQHWMESFELTGKLTIEGEFLKNAQSDFASASVSDEEIIRTIRNFHQQNGYLLDPHTAVGITAAKK-ADXQTPVTCLACAHPAKFNETVRKAL--------DIEVELPEELAVLKNLETNCKTVPANVEIIKNEILETI 460          
The following BLAST results are available for this feature:
BLAST of NO01G01480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29080.14.700e-23380.55threonine synthase [Nannochloropsis gaditana][more]
EWM25414.12.200e-13747.04threonine synthase [Nannochloropsis gaditana][more]
XP_005852426.16.800e-13187.12threonine synthase, partial [Nannochloropsis gadit... [more]
CBN76262.18.800e-13145.58Threonine synthase [Ectocarpus siliculosus][more]
XP_002183750.11.900e-12543.84predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX21624.11.200e-11942.37threonine synthase [Fistulifera solaris][more]
XP_002293628.11.600e-11941.75threonine synthase [Thalassiosira pseudonana CCMP1... [more]
GAX14851.13.500e-11942.37threonine synthase [Fistulifera solaris][more]
OEU18609.14.500e-11942.15L-threonine synthase [Fragilariopsis cylindrus CCM... [more]
PQM55080.16.800e-11542.76threonine synthase [Deltaproteobacteria bacterium][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008212NSK008212Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01480.1NO01G01480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01480.1NO01G01480.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01480 ID=NO01G01480|Name=NO01G01480|organism=Nannochloropsis oceanica|type=gene|length=2199bp
ATGGCGGACAGCAGCAGCAGCAACAGCGGCACTGGAGGCAGTAGCAGCAG
CGCCGGTGCCCATGGCGGCGGGAACGGAGATCGCGAGCAGCAGTCCCAGC
GGTCGCCTAACCAACTCCGGCAAGGGTCCATCTCCGCCTCGCACTCCATC
TCTATTTCTACACCTCAATTTCACAACGAACGGCATGGCTCTGCCCCCCC
CTCAGCTCACCAACCCGCCGGCCCTCAGTACCCACCCACTCACCGGGGTG
TCCTGTACTGTTCCACCCGCGGGGCTCGTCGCGACGTCACCTTCGAAGAG
GTAGTCATGAGTGGCCTCGCCCCGGATAAAGGTTTGTATGTCCCCCAAGA
AATTCCGTACATCTCTCTGGAGCAACTCGAAAAGCTTCGTGATGCCTCCT
TCGTTGAACTGGCCAATTACATCATGCGTTTATTCATCGGCCCAGAGGAC
ATCCCTCCTGAGAACCTACGAGTACTCATTGAGAGCAGCACCAAGTACTT
CCGTGTCCATGAGGTGGCCCCAGTGAGAAAAGTGGGTCCCACGTGGGTTT
TGGAGCTCTTTCATGGCCCGACGTTCGCGTTCAAGGACGTGGCGTTGCAG
TTTTTGGGGAACATGTTTGAGTATTTCTTGGCGAAGAAGAAGGGGGGCCC
GGACGCGAAATTGACGGTGTTGGGGGCCACAAGTGGAGATACAGGCTCGG
CAGCGATTCATGGATTGAGGGGGAAGAAGAACATTCAGGTGTTCGTTCTG
TATCCCAAGGGGAGGGTGAGCGAGGTGCAGGAGAGGCAAATGACCACGGT
GTTGGACCGCAACGTCCATTGCATTGCCGTGGAAGGTGCCACCTTTGATG
ATTGCCAGGACATCGTCAAAGCGGCTTTTCAGGACGAGGGGTTCCGGGAT
AATGCCAATCTGGGGGCTGTTAATTCGATTAATTGGGCCAGGGTGCTTGC
GCAGATCACATATTTTTTCCACGCGTACTTTCGTGTGCTGGCAAAGAATG
AGAAGGCCATGCAAAAGGAGCAACAGCAACAGCAACAGCAACAGCAAGCA
CAAGCACATGCGGCACAACAAGCGCAACGGGATGGAGGAGGCGGAGAAGG
AGAAGGAAGGGATGGAGGGGGAGTGTCGGCGGTGGCGGACGCCAAGGCAC
CACCAAGAGGCAGTAACAGCGGCAGCAGTAGTACCATCGCAGGTGGGGAG
GGAGGAGGAGGAGGAGGAAATAGTGAAATGATGTCGCAGCTATCGCCCAA
TGGAATTGCTGAGGGAGGAGGAGGAGGCGGAAGTGGAGGAGGAGGAGGAG
GAGAGAGGGAAGGGAAGAAGAAAAAGCGGTCTAAGAGCTTGCCAAAACTG
TCTTTCTCGGTGCCGACGGGGAATTTCGGAGATGCATTGGCGGGGTACTA
CGCCAAAGCAATGGGGCTACCCATTGACAAGATACTGGTGGCGACGAACG
AGAATGATATTTTGCACCGTTTCTTTACGAGTGGGAAATATTGGAAGAAG
GAGGTGCAGGCGACACTGAGTCCGTCGATGGACATTTCAATTTGCAGTAA
TTTCGAACGGTTGTTGTTTGATCTGGCGGGGAGAGATCCTGAGTTGCTTA
GGGAATGGATGGAGGAGTTCGAGAGAACGAAGAAGTTGACTCTTCCTCCC
CCTACTCTAGCCAAGGCGAGGGAGGACTTCATATCCTGTCGGGTCGATCA
GCCGGCAATGATTGAGGTGATGTTGTCCTTTCTACGGGATTATAACTACT
TGTTATGCCCCCATAGCGCGGTAGGGGTGACAGCAGCTAAGCAGTTGGCC
ATGTTGAATGCGGACACCATTTGCCTCGCGACTGCGCACCACGCCAAATT
CTTGGATGCTACGTTAAAGCATTTCCCCCTTGACGAGGTCGATGTGGAGG
AGATTGAGGAGGAGGTGCCAACGCAATTGCGAGATTTGGATCATCTACCT
ACGCGGTACGTAACCTTGCCGGCGAGTGCATATTACGTGAAGAAGTACGT
GTTGCAAACATTGGAGGGGAAGGATAACGCGGCTCTCCTGAGGTGGTTGG
CACTGGGGGGTTGGGTGTGGGGGTGGGGAAGCGGAAAGCAGGGGAAGAGA
AGACGGCAAGTATCGATGGTGGCGGCTGCAGCGGTTGCTGTAGCGGTGGT
GGGGACGGTGGTGAGTGTGTTGGAGGGATCACGGAGATGGAGGAGATAG
back to top

protein sequence of NO01G01480.1

>NO01G01480.1-protein ID=NO01G01480.1-protein|Name=NO01G01480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=733bp
MADSSSSNSGTGGSSSSAGAHGGGNGDREQQSQRSPNQLRQGSISASHSI
SISTPQFHNERHGSAPPSAHQPAGPQYPPTHRGVLYCSTRGARRDVTFEE
VVMSGLAPDKGLYVPQEIPYISLEQLEKLRDASFVELANYIMRLFIGPED
IPPENLRVLIESSTKYFRVHEVAPVRKVGPTWVLELFHGPTFAFKDVALQ
FLGNMFEYFLAKKKGGPDAKLTVLGATSGDTGSAAIHGLRGKKNIQVFVL
YPKGRVSEVQERQMTTVLDRNVHCIAVEGATFDDCQDIVKAAFQDEGFRD
NANLGAVNSINWARVLAQITYFFHAYFRVLAKNEKAMQKEQQQQQQQQQA
QAHAAQQAQRDGGGGEGEGRDGGGVSAVADAKAPPRGSNSGSSSTIAGGE
GGGGGGNSEMMSQLSPNGIAEGGGGGGSGGGGGGEREGKKKKRSKSLPKL
SFSVPTGNFGDALAGYYAKAMGLPIDKILVATNENDILHRFFTSGKYWKK
EVQATLSPSMDISICSNFERLLFDLAGRDPELLREWMEEFERTKKLTLPP
PTLAKAREDFISCRVDQPAMIEVMLSFLRDYNYLLCPHSAVGVTAAKQLA
MLNADTICLATAHHAKFLDATLKHFPLDEVDVEEIEEEVPTQLRDLDHLP
TRYVTLPASAYYVKKYVLQTLEGKDNAALLRWLALGGWVWGWGSGKQGKR
RRQVSMVAAAAVAVAVVGTVVSVLEGSRRWRR*
back to top
Synonyms
Publications