NO01G01460, NO01G01460 (gene) Nannochloropsis oceanica

Overview
NameNO01G01460
Unique NameNO01G01460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1575
Alignment locationchr1:371595..373169 +

Link to JBrowse

Properties
Property NameValue
DescriptionShort-chain dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:371595..373169 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_019647926.1 (PREDICTED: retinol dehydrogenase 13-like [Branchiostoma belcheri])

HSP 1 Score: 209.9 bits (533), Expect = 1.800e-50
Identity = 135/327 (41.28%), Postives = 179/327 (54.74%), Query Frame = 0
Query:  108 LRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQRLCSPLL----WCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLATPAAGTEPVAMA 431
            L GKT ++TGANTGIG+ET+R +A  GA+VILACR   +AE     I ++ G       +    LD++S++SV +FA   +    +  LDILINNAG+M   +  T +G E    TNH GHFLLT LL  +L+  +  R+V VSS+ H      +FDD   E + Y+ + AYGQSKLAN+LFT EL RRL                    G  +TA ++HPG + TE+AR+M   F  G  L  P+L      F K P QGA T++H A +  L    G YF +  A    S  A+D Q A RLWE+SE + GL    A  E  A A
Sbjct:   50 LDGKTVVITGANTGIGKETARDIARRGARVILACRDLTKAEATAAEIRRDTGNG----NVVMEKLDLASMKSVREFA--LKVNATESRLDILINNAGIMTCPQWKTEDGFEMQFGTNHLGHFLLTNLLLDKLKNSAPSRVVTVSSNAHMRGGKIHFDDINLEKT-YTPYSAYGQSKLANILFTTELDRRLK-------------------GTGVTAYSLHPGVIATELARHMDVSFGLGFTLLKPVLRAFMLLFGKRPQQGAQTTIHCAVSEGLEEFSGQYFADC-APKKPSKEAQDDQTARRLWELSEEMVGLKKDLAKAESAAEA 349          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_002608846.1 (hypothetical protein BRAFLDRAFT_115199 [Branchiostoma floridae] >EEN64856.1 hypothetical protein BRAFLDRAFT_115199 [Branchiostoma floridae])

HSP 1 Score: 209.5 bits (532), Expect = 2.300e-50
Identity = 134/317 (42.27%), Postives = 180/317 (56.78%), Query Frame = 0
Query:  106 VDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQRLCSPLLWC---FSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLAT 420
            V L+ KTA+VTGANTGIG E ++ LA  GA+VILACR+ ARAE A   I+K+ G +     +    LD++SL SV +FA   +E   +  LDIL+NNAG+    K  T +G +  +  NH GHFLLT LL   L+K +  R+V VSSS+HK     NF+D  YE   Y  F  Y QSKLAN+LFT EL RRL+                   G  +T  A HPG V+TE+ R +   + W   L  P+ +    F+K P+QGA T +H A    +    GLY+ + + T + S  A D  VA +LWEMSE + GL++
Sbjct:   10 VSLQDKTAVVTGANTGIGLEVAKDLARRGARVILACRNEARAEAARAEIVKDTGNE----NVMTSKLDLASLSSVREFAQRLKEE--ETRLDILVNNAGLCC-PKSTTEDGFDTQLQVNHLGHFLLTNLLLDVLKKSAPSRVVVVSSSVHKQCQGINFEDINYEKD-YVAFPVYCQSKLANLLFTRELARRLE-------------------GSGVTVYAAHPGLVRTELWRTLPELYGWKFTLMKPMFYLGMKFAKTPVQGAQTIIHCAVEEKISSESGLYYSDCDVT-EPSQNATDDAVARQLWEMSESMTGLSS 298          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_017077532.1 (PREDICTED: retinol dehydrogenase 13 [Drosophila eugracilis])

HSP 1 Score: 209.5 bits (532), Expect = 2.300e-50
Identity = 148/355 (41.69%), Postives = 194/355 (54.65%), Query Frame = 0
Query:   72 GAIFGVVTAVLLGWDGFIIHRIW--RQFVVGPRF-ETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEA-GTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFY---WGQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLAT 420
            G +   +   L+ W   I+   +  R+++ G +F +  D  GK  IVTGANTGIG+ET   +A+ G  V +ACR   R E+A + I+KE+  T I   Q     LD+SSL+S+  FAA F  +K    L +LINNAGVM   + +T +G E  +  NH GHFLLT LL   L+K +  RIVNVSS  H    S N  D L    +YS  GAY QSKLANVLFT EL +RL+                   G  +T N++HPG V TE+ RN  W F    + Q L  PL W   K P  GA T+++AA  P L+ V GLYF + +   DVSA AKD +  + LW  SE   G+ T
Sbjct:    2 GCLTNCLLCPLIFWPAVIVGAAYFLRKYMQGGQFTKHTDETGKVFIVTGANTGIGKETVLEIAKRGGTVYMACRDMNRCEKARQEIVKESNNTNIFSRQ-----LDLSSLESIRKFAAGF--KKEQDKLHVLINNAGVMHCPRTLTKDGFEMQLGVNHMGHFLLTHLLLDVLKKTAPSRIVNVSSLAH-THGSINTSD-LNSEKSYSRVGAYSQSKLANVLFTRELAKRLE-------------------GTGVTTNSLHPGAVDTELLRN--WKFLENSFVQYLVRPLQWTLFKTPQNGAQTTLYAALDPELKEVSGLYFSDCK-PKDVSAAAKDEKTGKFLWAESEKWTGVNT 325          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_017014746.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC108069254 [Drosophila takahashii])

HSP 1 Score: 208.8 bits (530), Expect = 3.900e-50
Identity = 140/324 (43.21%), Postives = 185/324 (57.10%), Query Frame = 0
Query:   95 RQFVVGPRF-ETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGL 418
            R+++ G +F +  D  GK  IVTG+NTGIG+ET   +A+ G  V +ACR   R E+A + I++E+G K     +    LD+SSL+S+  FAA F  +K    L +LINNAGVM   K +T +G E  +  NH GHFLLT LL   L+K +  RIVNVSS  H    S N DD L    +YS  GAY QSKLAN+LFT EL +RL+                   G  +T N++HPG V TE++RN  WP      L  PL     K P+ GA T+++AA  P L+ V GLYF + +A  DVSA AKD +  + LW  SE   G+
Sbjct:   27 RKYMQGGQFTKQTDETGKVFIVTGSNTGIGKETVLEIAKRGGTVYMACRDMNRCEKARQDIIRESGNK----NIFARELDLSSLESIRKFAAGF--KKEQDKLHVLINNAGVMHCPKTLTKDGFEMQLGVNHMGHFLLTHLLLDVLKKTAPSRIVNVSSLAH-LQGSINVDD-LNSEKSYSRVGAYSQSKLANILFTRELAKRLE-------------------GTGVTTNSLHPGAVDTELSRN--WPSI-VSFLVRPLQLILFKTPVNGAQTTLYAALDPELKEVSGLYFSDCKA-KDVSAAAKDDKTGKFLWAESEKWTGV 319          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_020815234.1 (retinol dehydrogenase 13-like [Drosophila serrata])

HSP 1 Score: 208.8 bits (530), Expect = 3.900e-50
Identity = 143/330 (43.33%), Postives = 180/330 (54.55%), Query Frame = 0
Query:   95 RQFVVGPRF-ETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFY---WGQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLATP 421
            +Q++ G +F    D  GK  IVTGANTGIG+ET   +A  G  V +ACR   R  +A   I+KE   +     +    LD+SSL SV  F A F  +K    LD+LINNAGVM   KM+T +G E  +  NH GHFLLT LL   L+K S  RIV VSS  H   T  N  D L    +Y    AY QSKLANVLFT EL +RL+                   G  +T N++HPG V TE+ARN  W F+   + Q    PL+W   K P  GA TS++AA  P L+ V GLYF + +   +V+  AKD + A+ LWE SE   GL TP
Sbjct:   27 KQYMQGGQFTRETDETGKVFIVTGANTGIGKETVLEIARRGGTVYMACRDLGRCNKARDEIIKETNNQ----NIFSRQLDLSSLDSVRQFVAGF--KKEQQKLDVLINNAGVMRCPKMLTKDGFELQLGVNHIGHFLLTNLLLDVLKKSSPSRIVVVSSLAHTRGT-INVHD-LNSEKSYDEGAAYSQSKLANVLFTRELAKRLE-------------------GTGVTVNSLHPGVVDTELARN--WAFFQTNFVQYFLKPLIWPLLKTPKSGAQTSIYAALDPELKDVTGLYFSDCK-QKEVAPAAKDNKFAKFLWEESEKWTGLQTP 326          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_002613396.1 (hypothetical protein BRAFLDRAFT_68404 [Branchiostoma floridae] >EEN69405.1 hypothetical protein BRAFLDRAFT_68404 [Branchiostoma floridae])

HSP 1 Score: 208.4 bits (529), Expect = 5.100e-50
Identity = 143/345 (41.45%), Postives = 191/345 (55.36%), Query Frame = 0
Query:   77 VVTAVLLGWDGFIIHRIWRQFVVGPRFETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQRLCSPL----LWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGL 418
            VV  V+LG  G ++ R +     G    T  L GKT ++TGANTGIG+ET+R +A+ GA+VILACR   +AE A   I ++ G       +    L+++SL SV +FAA  +   G+  LDILINNAG+M   +  T +G E    TNH GHFLLT LL  +L+K +  R+VNVSSS H A    +FDD   E S Y    AY QSKLANVLFT EL R+L                    G  +T  ++HPG + TE+ RN+   + W   L  PL    L    K P QGA T++H A +  L    G YF++  A  +    AKD +VA++LWE+SE + GL
Sbjct:   17 VVIGVVLGVAGVVLLRKFCD--GGVCRSTARLDGKTVVITGANTGIGKETARDIAKRGARVILACRDLTKAEAAAAEIRQDTGNG----NVVVEKLNLASLNSVREFAA--KINAGESRLDILINNAGIMTCPQWKTEDGFEMQFGTNHLGHFLLTNLLLDKLKKSAPSRVVNVSSSAH-AGGHIHFDDINLEKS-YGPIKAYCQSKLANVLFTKELDRKLK-------------------GTGVTTYSLHPGCIHTELQRNLDDAYGWLYYLLKPLFLVGLRLLGKAPQQGAQTTIHCAVSEGLETSSGQYFMDC-APKEPIPEAKDEEVAKKLWELSEKMVGL 331          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_002613397.1 (hypothetical protein BRAFLDRAFT_118764 [Branchiostoma floridae] >EEN69406.1 hypothetical protein BRAFLDRAFT_118764 [Branchiostoma floridae])

HSP 1 Score: 208.4 bits (529), Expect = 5.100e-50
Identity = 142/346 (41.04%), Postives = 188/346 (54.34%), Query Frame = 0
Query:   87 GFIIHRIWRQFVVGPRFETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQRLCSPL----LWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLATPAAGTEPVA 429
            G   +   + F  G  + T  L GKTAIVTG+NTG+G+ET+R LA  GA+VILACR+  +AEEA   I K  G       +    LD+SSL SV +FAA   E+  +  LDILINNAG+M+  +  T +G E    TNH GHFLLT LL  +L+K +  R+V VSS  H+     +FDD   E + Y    AYGQSKLAN+LF  EL ++L+                   G  +T  AVHPG V+++++R M         L  PL    ++   K+P QGA TS+H A    L    GLYF +  A  D S   +D +VA+RLWE+SE + GL       E  A
Sbjct:   18 GVAFYAARKYFGGGVCYSTARLEGKTAIVTGSNTGLGKETARDLARRGARVILACRNVTKAEEAAEDIRKTTGNG----NVVVLKLDLSSLASVREFAAGINEK--EERLDILINNAGIMMCPQWKTEDGFEMQFGTNHLGHFLLTNLLMDKLKKCAPSRVVTVSSMGHQW-GKIHFDDINLE-NGYEPLKAYGQSKLANILFIRELAKKLE-------------------GTEVTCYAVHPGGVRSDLSRYMPDAHGRWLALVQPLVQLGMYVVGKSPEQGAQTSLHCALQEGLESKSGLYFSDC-APIDPSPAGQDDEVAKRLWEVSEEMVGLKKDLTKAEAAA 335          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_015836972.1 (PREDICTED: retinol dehydrogenase 12 [Tribolium castaneum])

HSP 1 Score: 208.4 bits (529), Expect = 5.100e-50
Identity = 138/320 (43.12%), Postives = 176/320 (55.00%), Query Frame = 0
Query:   95 RQFVVGPRFE-TVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYW-GQRLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSE 413
            +++  GP+ + +V   GK  IVTGANTGIG+ET R LA   A+V +ACR   R EEA   I+ +   K   C+      D++SLQSV +F   F+  +    LDILINN GVM   K  T +G E  +  NH GHFLLT LL   L++ +  RIVNVSS  HK     N DD L     Y    AY QSKLAN+LFT EL ++L+                   G  +T NAVHPG V TE+ R+M++   W    L  P++W F K+P QGAYT V+ A +  L  V G YF N E  A+VS  AKD   A  LW +SE
Sbjct:   38 KEWTGGPKLQPSVSAEGKVVIVTGANTGIGKETVRDLARRKAKVYMACRDLKRCEEARTEIVLQTKNKYVYCR----KCDLASLQSVREFVKQFKHEQ--PRLDILINNGGVMRTPKSKTKDGFEMQLGVNHLGHFLLTNLLLDRLKESAPSRIVNVSSVAHKR-GKINKDD-LNSDKNYDPADAYAQSKLANILFTKELAKKLE-------------------GTGVTVNAVHPGIVNTEIIRHMSFFNSWLAAILIKPIVWPFIKSPDQGAYTIVYVALSSKLNKVTGKYFSNCE-EAEVSEGAKDEATASWLWAVSE 329          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_016958700.1 (PREDICTED: retinol dehydrogenase 13 [Drosophila biarmipes])

HSP 1 Score: 206.8 bits (525), Expect = 1.500e-49
Identity = 139/331 (41.99%), Postives = 186/331 (56.19%), Query Frame = 0
Query:   95 RQFVVGPRFETV-DLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQ--RLCSPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLATPAA 423
            + ++ G +F+ V D  GK  IVTGANTGIG+ET+  +A  G  V LACR   R E+A + I+KE   +     +    LD+SSL+S+ +FAA F  +K    LD+LINNAGVM   K +T +G E  +  NH GHFLLT LL   L+K +  RIV VSS  H   T  N DD L    +Y    AY QSKLAN+LF+ EL +RL+                   G  +T N++HPG V TE+ RN  W F+     +   P++W   K P  GA TS++AA  P L+ V G+YF + +  A V+  A D +V + LW  SE   GLATPA+
Sbjct:   27 KDYMQGGQFKKVTDETGKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQ----NIFSRELDLSSLESIREFAAGF--KKEQSRLDVLINNAGVMRCPKTLTKDGFELQLGVNHIGHFLLTNLLLDVLKKSAPSRIVVVSSLAHTRGT-MNVDD-LNSEKSYDEGLAYSQSKLANILFSRELAKRLE-------------------GTGVTVNSLHPGVVDTELTRN--WAFFQTNFVKFFKPMIWPLLKTPKSGAQTSIYAALDPELKEVTGVYFSDCKPKA-VAPAALDDKVGKFLWAESEKWTGLATPAS 327          
BLAST of NO01G01460 vs. NCBI_GenBank
Match: XP_019647856.1 (PREDICTED: retinol dehydrogenase 14-like [Branchiostoma belcheri])

HSP 1 Score: 206.8 bits (525), Expect = 1.500e-49
Identity = 136/315 (43.17%), Postives = 181/315 (57.46%), Query Frame = 0
Query:  108 LRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEAIRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILINNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNVSSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDALQRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQRLCSPL----LWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKDPQVAERLWEMSEGVCGLA 419
            L GKTAIVTGAN GIG+ET+R LA  GA+VILACR  ++AE A + I +  G       +    L+++SL SV  FAA  ++R  +  LD+LINNA V    K VT +G E   ATNH GHFLLT LL   L+K +  R+V VS+ L+K     +FDD +    +YS  GAY QSKLANVLF  EL RRL+                   G  +TANA+HPG V TE++RN +    W   L  P     ++ F+K   QGA TSVH A    L    G+YF + +   +++ V KD   A++LW++SE + GL+
Sbjct:    8 LDGKTAIVTGANAGIGKETARALAAKGARVILACRDTSKAETAAKDIRETTGNG----NVVVEELNLASLASVRKFAARIKKR--ETSLDVLINNAAVSACPKWVTEDGFERQFATNHLGHFLLTNLLLDLLKKSAPSRVVIVSAVLYKR-GKIDFDD-INSEKSYSPHGAYCQSKLANVLFMRELARRLE-------------------GTGVTANALHPGVVDTELSRNFSTTLGWIMLLLGPFFTAWVYLFAKTAKQGAETSVHLAVDKELETTSGVYFSDCKPN-ELAPVGKDDATAKKLWQISEEMVGLS 294          
The following BLAST results are available for this feature:
BLAST of NO01G01460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_019647926.11.800e-5041.28PREDICTED: retinol dehydrogenase 13-like [Branchio... [more]
XP_002608846.12.300e-5042.27hypothetical protein BRAFLDRAFT_115199 [Branchiost... [more]
XP_017077532.12.300e-5041.69PREDICTED: retinol dehydrogenase 13 [Drosophila eu... [more]
XP_017014746.13.900e-5043.21PREDICTED: LOW QUALITY PROTEIN: uncharacterized pr... [more]
XP_020815234.13.900e-5043.33retinol dehydrogenase 13-like [Drosophila serrata][more]
XP_002613396.15.100e-5041.45hypothetical protein BRAFLDRAFT_68404 [Branchiosto... [more]
XP_002613397.15.100e-5041.04hypothetical protein BRAFLDRAFT_118764 [Branchiost... [more]
XP_015836972.15.100e-5043.13PREDICTED: retinol dehydrogenase 12 [Tribolium cas... [more]
XP_016958700.11.500e-4941.99PREDICTED: retinol dehydrogenase 13 [Drosophila bi... [more]
XP_019647856.11.500e-4943.17PREDICTED: retinol dehydrogenase 14-like [Branchio... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008215NSK008215Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01460.1NO01G01460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576293gene_122Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01460.1NO01G01460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01460 ID=NO01G01460|Name=NO01G01460|organism=Nannochloropsis oceanica|type=gene|length=1575bp
ATGTTGCTATCTTGCTCTGCCGCCTTCTCCCAGCTCGAAGCGCTTTACCT
GGCGGGAGGGCTCGCCTCTCTGTACGCTATCTTGGTAGGGCTTTGGCGCT
GGGGCACCTATGAGGCGAGGACTCCCGAAACCTACGTGCCTTTGGCCGGC
TTGGCTGTCGCGCCGCTCCTCCCGTTCCTGCCTCTGGCTTTGTTTGTAGA
GAAAGGAAAGACTGGAGCCATTTTTGGGGTAGTGACAGCGGTGCTCTTGG
GATGGGATGGTTTCATCATCCATCGCATCTGGCGTCAGTTTGTGGTTGGA
CCGCGCTTCGAGACCGTGGACCTGCGTGGGAAAACGGCTATCGTAACAGG
CGCCAACACAGGAATCGGACGGGAGACATCGCGCTGTCTAGCAGAGATGG
GTGCACAGGTCATTTTGGCGTGTCGATCGCGGGCGCGGGCGGAGGAGGCC
ATTCGTGTGATTTTGAAGGAGGCAGGAACTAAAATTGACCCTTGTCAACT
AGAGTTCTGGACACTGGACGTGAGCAGCTTGCAGTCTGTGGGAGACTTTG
CGGCAATCTTCCAGGAGAGAAAAGGGGATGGCGGACTGGATATTTTGATT
AACAATGCAGGGGTGATGCTCAATGAGAAGATGGTAACGTCGGAAGGCTT
GGAAGCAACGATGGCGACTAACCATTATGGGCACTTCCTCCTGACTTTAC
TACTCTTCCCAGAGCTAGAAAAAGTTTCAGATGGACGCATCGTTAATGTC
TCCTCCAGCTTGCACAAGGCACCGACTTCCTTTAATTTTGACGATCCTCT
TTATGAGTCCAGCGCGTATAGCCTCTTTGGTGCTTATGGGCAGAGCAAGT
TAGCCAATGTTTTGTTCACTTTCGAATTACAACGACGCTTAGACGCACTA
CAACGGGATCGGGCCAAGATTATCGGAAGGCGAGGGGGAAGAGATGGAGG
AGGGAAGGTGATGACGGCCAACGCCGTACATCCAGGGAATGTCCAGACAG
AGGTAGCCCGGAATATGGCATGGCCCTTTTATTGGGGTCAGCGATTGTGC
AGTCCTTTGTTGTGGTGTTTCTCGAAAAATCCATTGCAGGGTGCTTATAC
CTCTGTGCATGCTGCGACTGCCCCGAGTTTGAGGGGGGTGGGTGGGTTGT
ATTTTGTGAACAGTGAGGCGACAGCTGACGTGTCTGCTGTGGCGAAGGAT
CCGCAGGTTGCCGAGAGACTATGGGAGATGAGTGAGGGTGTGTGTGGCTT
GGCCACTCCCGCAGCAGGTACAGAGCCAGTAGCCATGGCGGCGGCACCAG
CCATAGCAAAGAAAAGCTCGCCGACGAGAAGGAGAAGGGAAAGCGTGAGT
GCCGGTGCCAACACACCTGGTAAAAAGGCGATGACGCCGAAGAAAAGTGA
TGTTGCGAATGGTGGGGGGAATGGTGGGCGGAAGAGCAAGTCCCCGGCAA
GGAGACGGAGTGGAAAAGTGAATTGACAAAAAGTGGGAAATGTTGGTGGT
GCTGGTGTCGAGGGGTGGAAGAAAAGAAAGCAGCAGTGCTTGTGTGGAAA
AGAAAAAGAGGGTAAATAAATCAAG
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protein sequence of NO01G01460.1

>NO01G01460.1-protein ID=NO01G01460.1-protein|Name=NO01G01460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=492bp
MLLSCSAAFSQLEALYLAGGLASLYAILVGLWRWGTYEARTPETYVPLAG
LAVAPLLPFLPLALFVEKGKTGAIFGVVTAVLLGWDGFIIHRIWRQFVVG
PRFETVDLRGKTAIVTGANTGIGRETSRCLAEMGAQVILACRSRARAEEA
IRVILKEAGTKIDPCQLEFWTLDVSSLQSVGDFAAIFQERKGDGGLDILI
NNAGVMLNEKMVTSEGLEATMATNHYGHFLLTLLLFPELEKVSDGRIVNV
SSSLHKAPTSFNFDDPLYESSAYSLFGAYGQSKLANVLFTFELQRRLDAL
QRDRAKIIGRRGGRDGGGKVMTANAVHPGNVQTEVARNMAWPFYWGQRLC
SPLLWCFSKNPLQGAYTSVHAATAPSLRGVGGLYFVNSEATADVSAVAKD
PQVAERLWEMSEGVCGLATPAAGTEPVAMAAAPAIAKKSSPTRRRRESVS
AGANTPGKKAMTPKKSDVANGGGNGGRKSKSPARRRSGKVN*
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Synonyms
Publications