NO01G01430, NO01G01430 (gene) Nannochloropsis oceanica

Overview
NameNO01G01430
Unique NameNO01G01430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2404
Alignment locationchr1:365999..368402 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:365999..368402 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR001810F-box_dom
Homology
The following BLAST results are available for this feature:
BLAST of NO01G01430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01430.1NO01G01430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576285gene_119Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01430.1NO01G01430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01430 ID=NO01G01430|Name=NO01G01430|organism=Nannochloropsis oceanica|type=gene|length=2404bp
TCAAATGACTTGGCCGCCAAGACGTCTCTATGCAGGATAAGATATGGTAT
CTTGATGCTTCTTGGTCCTCTTGGTGTATATTGTAATTCGATAAAAATCC
TGAGGCTGGAGGATCGTTCTTTATATTGCGTGTGTTAGTTCGTGAGTTCC
TTCTGACACTTTGCTTTCTACTTGAATTGCGAAAGGTTGCTAGCTCCACC
GCGCGTTCTGTGTTTGAGACGCACTATGCTTTTACTTCCCATCTCTGTTC
TCTGTAAGCACACAGAGATAACATCATGCGCTTTTCTTTGATAGATGTAC
CAACTATTGAGCCCCTTCTTTGTCACTTTATCTCGAGACAGGCGGCGTTG
TTCACCCTTGGAAGCAGTTCTTATCCAGTAGATCATGCACAGCGTCCTCC
TTCCCCAGGGCGCTTCAACCACCACCACCACCACGGCCTCATCTCGACCC
AAGCGTATGTCTTCTTCCTTGCTGTTGCAGCCTTCGTCCTTGTCACGGTC
ATGCTGCTCGCCTGTTGCCACACAGCTACCAGACAGCCTGCTCCTACATA
TTTTTGGATTTCTCGAGGTACCTGCCTTGGTCGCCCTGTTGGCTACAGAC
CGTCATTGGCGGACCCTCGCAAGGAGTCGCTCATTATGGAAACCTGCGTG
CCAGTCCGAGTGGCCTGGCTTGATGCAACAGCTCGAAGGCTGTCTTGACG
TGCAACCCGATGCGTACCGTTGCTTCTTCTTTAAGAACCGGCGCTCCGCT
TTCGAAGCACGCTTTGAGCGGGCCATCAGCAGCCGCCCTTCGACCGTCAG
CAGCAGCGCTAAATCCAGTAGCAGAGAAAGCGAGACGGCAGCAGCAGCGG
CGGCAGCAGCGGCAGCCGCAAAGGCAGCGAATGCAGCAGCCGAGGCGAGG
CGACGATACCTGGCGCACTTCTTCGAAGAGATAATTTTGTTTGTCGACAT
CCGTCATGCCGTCACGGGCAAGTCTCTCATTTCCATGGCTGTACCTTTGA
CCTTGGCCAATGTTCGCAAACTCTTCAAGGCAGACATGCGCTTGTCGGGG
CATTACGACGGAATAGATGTGCAGGAGACGTTTTTGGTGCCGGGAGTAGA
ATTGGATCTCGATGACAATGAGGCGCAGGCCTTTATGGCAGCAGTAACGG
AGGGAGAGCAGAATGAGAATATGGAAGAGGGGGTTAGTAATGCCAGATTT
GGTGCCATCGCGGGGTTAAGGTTTGAATTCTCGCTTTTTCACCGAAAGGC
TAAGACCATGGCACTGTTGGGTCAGGGGCAGGCGGATTTGGATAGGCGCT
TGAATGGGTACGGACCTCGGTTTGTAGCTGCTGATGATGAAACAGAAGCG
GCCAATAATCAGACGAAGGTGCAAGAAGGACGATTTTTTGGAGAGGGTGC
TGAGTTCTTGTGCGCTGTTCCCCTTTTTGCCTGGATTTTTGCCTCGTCAT
CCTCTTCGATGTCGGCGGTGGTTAAAGGCGGAGAGGGAGAGGCTGCAAGG
AGGAGTCGACATCGTGTGACATTGGATGCTTTAGCAATTGAAGTACATTA
TGTCGATACGGCTGATACGTCGGTGCGGCCCCAGGATGAGCTCTTGGAAT
GCTTGTATCAGATCGTAAAGAAGGAGTTAGTGTGGGTGTAAGAGGGACAA
ATGTGTGAATACATTGAGAATGCTGGACGATGGAGAAGAGGAAGATGAAT
GTGGCGGAGATGAAAACGATATTTCTATTACCTTTATTCAATCATGTATG
ATGCATATTTAATTCTGCGGATAAATTCGTATTGGCGAGTGGGTGGGCGG
AGATGTACGAGCAAAGAAGGGCAGCTATGGCAGCATCAAGCATCAAGAAC
CATTCCTACTCTTAACCGAGAAAAGTTTTAGAAGAACAGATAAAGAAGCA
ACACAAATTTTGCACATGTATAGTGATCTGCTTCTTTTTCCTTCCCTTGT
GTCAAGAATCAAACATACATGCTTGGTTCTTGTCTTCTGCTTTTGGTTCT
CGATCTTCTGCGCTGTACTTCTCAATTAGTACAGCACCACACACTCCAAC
CCTGAAACAGCATACACTGCTCCCTCCCCTTTCAATGTATCCATGATGCG
CGCTCAGGTCATCGCAAGGGGGGGGGATTAATTTGAAATGAAAGCGAGGG
GATTTTGGAAATGGAAAGAGGAGGATGGATGCGACGGACAAGAGAATGTA
TGTATATGTATGTTGACTAATACATATATACAGTATATACATAGACATTA
TGAATCGCAATTTTCGATGTTGTATTTATTGTTATTATTCTATTTCTCGT
CGACTCCTTCGATCTTAACAATTTGCAACTCCTCCTCTCTTCACCACTTC
CTACCATCCACTTCGATTCTCTTTTACAACTCCGCCCTGCTTCATCGCTC
TCAC
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protein sequence of NO01G01430.1

>NO01G01430.1-protein ID=NO01G01430.1-protein|Name=NO01G01430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MHSVLLPQGASTTTTTTASSRPKRMSSSLLLQPSSLSRSCCSPVATQLPD
SLLLHIFGFLEVPALVALLATDRHWRTLARSRSLWKPACQSEWPGLMQQL
EGCLDVQPDAYRCFFFKNRRSAFEARFERAISSRPSTVSSSAKSSSRESE
TAAAAAAAAAAAKAANAAAEARRRYLAHFFEEIILFVDIRHAVTGKSLIS
MAVPLTLANVRKLFKADMRLSGHYDGIDVQETFLVPGVELDLDDNEAQAF
MAAVTEGEQNENMEEGVSNARFGAIAGLRFEFSLFHRKAKTMALLGQGQA
DLDRRLNGYGPRFVAADDETEAANNQTKVQEGRFFGEGAEFLCAVPLFAW
IFASSSSSMSAVVKGGEGEAARRSRHRVTLDALAIEVHYVDTADTSVRPQ
DELLECLYQIVKKELVWV*
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Synonyms
Publications