NO01G01400, NO01G01400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01400 vs. NCBI_GenBank
Match: XP_002909328.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY58142.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 112.1 bits (279), Expect = 1.600e-21 Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 0 Query: 39 DVEVRKADQEMINEFGRLNNKYIELDEDLTGLKEQLEKLDDAVTELMVGVGGPVRLLLGEAFVEVSEDYATEYCERKQEQLQARVEELGAEKEGIAARQMELKKALYGRFGNSINLESS 158 + +VRK DQ INEFGR N E+ E LK++L+ LDDA T+LM+G G V+L +GE+FVE SED+A EY E++ E+ ++ L AE+ + RQ LKK LY RFG SINLE S Sbjct: 9 EADVRKEDQLRINEFGRNNAALHEIREQKKALKDKLDTLDDANTDLMMGEGDNVQLFIGESFVEASEDFAQEYLEKRVEEANNELKRLQAEESKLETRQAALKKVLYSRFGQSINLEDS 127
BLAST of NO01G01400 vs. NCBI_GenBank
Match: EJK46970.1 (hypothetical protein THAOC_34339 [Thalassiosira oceanica]) HSP 1 Score: 105.9 bits (263), Expect = 1.200e-19 Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 0 Query: 35 DDSPDVEVRKADQEMINEFGRLNNKYIELDEDLTGL---------KEQLEKLDDAVTELMVGVGGPVRLLLGEAFVEVSEDYATEYCERKQEQLQARVEELGAEKEGIAARQMELKKALYGRFGNSINLES 157 ++ D EVR+ DQ+ INEFGRLN + E+ + L ++ LEK++DA TELM+ G V L LG+A EV ED ATEYCE++ ++ Q R+++L E+ I RQ LKK LY RFG SINLE+ Sbjct: 14 EEENDNEVRRGDQDQINEFGRLNARLSEVKAEAQRLEVAHSSILAQKHLEKIEDASTELMMAGGDTVLLRLGDAMFEVEEDDATEYCEKEADRQQERLDKLKEEEADILQRQDGLKKVLYSRFGKSINLET 144
BLAST of NO01G01400 vs. NCBI_GenBank
Match: XP_009529201.1 (hypothetical protein PHYSODRAFT_315748 [Phytophthora sojae] >EGZ15452.1 hypothetical protein PHYSODRAFT_315748 [Phytophthora sojae]) HSP 1 Score: 104.8 bits (260), Expect = 2.600e-19 Identity = 57/119 (47.90%), Postives = 75/119 (63.03%), Query Frame = 0 Query: 39 DVEVRKADQEMINEFGRLNNKYIELDEDLTGLKEQLEKLDDAVTELMVGVGGPVRLLLGEAFVEVSEDYATEYCERKQEQLQARVEELGAEKEGIAARQMELKKALYGRFGNSINLESS 158 + +VRK DQ INEFGR N E+ E LK++L+ LDDA T+LM+G G V+L +GE+FVE SED+A EY E++ E+ A +++ LKK LYGRFG SINLE S Sbjct: 9 EADVRKEDQLRINEFGRNNASLHEIREQKKALKDKLDTLDDANTDLMMGEGDNVQLFIGESFVEASEDFAQEYLEKRVEEANAELKKXXXXXXXXXXXXAALKKVLYGRFGQSINLEDS 127
BLAST of NO01G01400 vs. NCBI_GenBank
Match: XP_024581786.1 (prefoldin family protein [Plasmopara halstedii] >CEG45417.1 prefoldin family protein [Plasmopara halstedii]) HSP 1 Score: 104.0 bits (258), Expect = 4.400e-19 Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 0 Query: 39 DVEVRKADQEMINEFGRLNNKYIELDEDLTGLKEQLEKLDDAVTELMVGVGGPVRLLLGEAFVEVSEDYATEYCERKQEQLQARVEELGAEKEGIAARQMELKKALYGRFGNSINLESS 158 + +VRK DQ INEFGR N E+ E LK++L+ LDDA T+LM+G G VRL +GE+FVE SE+ A Y E++ E ++L +++ + ARQ LKK LY RFG SINLE S Sbjct: 9 EADVRKDDQLRINEFGRNNAALHEIREQKKALKDKLDTLDDANTDLMMGEGDNVRLFIGESFVEASEESAQVYLEKRMEVANNEFKKLQSKESKLEARQAVLKKMLYSRFGQSINLEDS 127
BLAST of NO01G01400 vs. NCBI_GenBank
Match: GAX28979.1 (prefoldin subunit 4 [Fistulifera solaris]) HSP 1 Score: 100.9 bits (250), Expect = 3.700e-18 Identity = 59/121 (48.76%), Postives = 75/121 (61.98%), Query Frame = 0 Query: 36 DSPDVEVRKADQEMINEFGRLNNKYIELDEDLTGLKEQLEKLDDAVTELMVGVGGP-VRLLLGEAFVEVSEDYATEYCERKQEQLQARVEELGAEKEGIAARQMELKKALYGRFGNSINLE 156 D D EVR+ DQ IN+F RLN + L + L+++LE LDDA TELM+ G V L +GEAF E+ E+ ATEYCE+ EQ QA+V+ Q +LK+ LYGRFG SINLE Sbjct: 11 DENDSEVRREDQNNINQFARLNARLHTLRQKKESLQKELESLDDASTELMMISGNTHVLLTMGEAFFEIPEEEATEYCEKLVEQYQAQVDAXXXXXXXXXXEQAKLKQLLYGRFGKSINLE 131
BLAST of NO01G01400 vs. NCBI_GenBank
Match: XP_009843049.1 (hypothetical protein H257_16351 [Aphanomyces astaci] >ETV67490.1 hypothetical protein H257_16351 [Aphanomyces astaci]) HSP 1 Score: 100.5 bits (249), Expect = 4.800e-18 Identity = 55/117 (47.01%), Postives = 73/117 (62.39%), Query Frame = 0 Query: 39 DVEVRKADQEMINEFGRLNNKYIELDEDLTGLKEQLEKLDDAVTELMVGVGGPVRLLLGEAFVEVSEDYATEYCERKQEQLQARVEELGAEKEGIAARQMELKKALYGRFGNSINLE 156 +V+VRK DQ+ INEFGR N++ +L ++L LKE+LE LDDA TE+M+G G V+L +GE+FVEVSE+ A EY E + ++ KK LY RFG SINLE Sbjct: 9 EVDVRKEDQDRINEFGRNNSRLADLRDELKALKEKLETLDDANTEIMMGAGDNVQLFIGESFVEVSEEDAQEYLEAQTDKANXXXXXXXXXXXXXXXXXXXXKKVLYARFGTSINLE 125
BLAST of NO01G01400 vs. NCBI_GenBank
Match: OQR87118.1 (hypothetical protein THRCLA_22936 [Thraustotheca clavata]) HSP 1 Score: 94.7 bits (234), Expect = 2.700e-16 Identity = 47/99 (47.47%), Postives = 74/99 (74.75%), Query Frame = 0 Query: 39 DVEVRKADQEMINEFGRLNNKYIELDEDLTGLKEQLEKLDDAVTELMVGVGGPVRLLLGEAFVEVSEDYATEYCERKQEQLQARVEELGAEKEGIAARQ 138 +V+VRK DQ+ INEFGR N++ ++ +++ L+++LE LDDA TE+M+G G V+L +GE+FV+VSE+YA EY E + E+ QA+V +L E+ + +RQ Sbjct: 9 EVDVRKEDQDRINEFGRNNSRLADVRDEIKALQDKLETLDDANTEVMMGEGDDVQLFIGESFVKVSEEYAQEYLEAQTEKTQAKVAKLQEEETSLESRQ 107
BLAST of NO01G01400 vs. NCBI_GenBank
Match: CCA18583.1 (conserved hypothetical protein [Albugo laibachii Nc14] >CCA20540.1 conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 93.6 bits (231), Expect = 5.900e-16 Identity = 57/131 (43.51%), Postives = 78/131 (59.54%), Query Frame = 0 Query: 41 EVRKADQEMINEFGRLNNKYIELD----------------EDLTGLKEQLEKLDDAVTELMVGVGGPVRLLLGEAFVEVSEDYATEYCERKQEQLQARVEELGAEKEGIAARQMELKKALYGRFGNSINLE 156 +VR+ DQE INEFG +N + +L + + L+E+L+ L+DAVTELM+G G V L++GE+FVE SE+ A EY E E + E L E+E + R LKK LYGRFG++INLE Sbjct: 11 DVRREDQERINEFGAINFRLNQLRLEKKALQVCSCIMSTVDIIASLQEKLDTLEDAVTELMMGEGDSVHLMIGESFVERSEEGAQEYLEELTETTKKANESLVTEEEELENRHAILKKLLYGRFGDNINLE 141
BLAST of NO01G01400 vs. NCBI_GenBank
Match: XP_021619192.1 (probable prefoldin subunit 4 [Manihot esculenta] >OAY44253.1 hypothetical protein MANES_08G135700 [Manihot esculenta]) HSP 1 Score: 93.6 bits (231), Expect = 5.900e-16 Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 0 Query: 39 DVEVRKADQEMINEFGRLNNKYIELDEDLTGLKEQLEKLDDAVTELMVGVGGPVRLLLGEAFVEVSEDYATEYCERKQEQLQARVEELGAEKEGIAARQMELKKALYGRFGNSINLE 156 + EV DQ+ IN+FGRLNN++ ELD+++ KE E L+DA EL++ VR +GE F VS++ E+ +E +E+L EK+ I A+ ELKK LYG+FG+SINLE Sbjct: 8 ETEVTWEDQQNINKFGRLNNRFHELDDEIKIAKETNENLEDASNELILTDEEVVRFQIGEVFAHVSKEEVETRIEQMKEVTSKNLEKLEEEKDSILAQMAELKKILYGKFGDSINLE 124
BLAST of NO01G01400 vs. NCBI_GenBank
Match: XP_019439941.1 (PREDICTED: probable prefoldin subunit 4 [Lupinus angustifolius] >OIW13816.1 hypothetical protein TanjilG_31705 [Lupinus angustifolius]) HSP 1 Score: 93.6 bits (231), Expect = 5.900e-16 Identity = 51/117 (43.59%), Postives = 73/117 (62.39%), Query Frame = 0 Query: 39 DVEVRKADQEMINEFGRLNNKYIELDEDLTGLKEQLEKLDDAVTELMVGVGGPVRLLLGEAFVEVSEDYATEYCERKQEQLQARVEELGAEKEGIAARQMELKKALYGRFGNSINLE 156 + EV DQ+ IN+FGRLNN++ EL++++ KE E L+DA EL++ VR +GE F VS+D E +E ++E+L EKE + A+ ELKK LYG+F +SINLE Sbjct: 8 ETEVTWEDQQNINKFGRLNNRFHELEDEIKFAKESNENLEDASNELIITDEEVVRFQIGEVFAHVSKDEVENRIEEMKEVTSHKLEKLXXEKESVLAQMSELKKILYGKFKDSINLE 124 The following BLAST results are available for this feature:
BLAST of NO01G01400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01400 ID=NO01G01400|Name=NO01G01400|organism=Nannochloropsis oceanica|type=gene|length=785bpback to top protein sequence of NO01G01400.1 >NO01G01400.1-protein ID=NO01G01400.1-protein|Name=NO01G01400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=158bpback to top Synonyms
Publications
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