NO01G01340, NO01G01340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_007856870.1 (MULTISPECIES: SDR family NAD(P)-dependent oxidoreductase [Acidovorax] >EJE51309.1 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase [Acidovorax sp. CF316] >PTW06329.1 3-oxoacyl-[acyl-carrier protein] reductase [Acidovorax sp. CF301]) HSP 1 Score: 273.1 bits (697), Expect = 8.900e-70 Identity = 143/249 (57.43%), Postives = 181/249 (72.69%), Query Frame = 0 Query: 9 EAATKKIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 E K+AIVTGAAGT+G + ++LL++G VA +D + A L T L +A PF DIS A AV+ I G V +L+NNAG+LS NK T+ AEWR V+ NLDGAF+L+Q ++P M+ +GRI+N S+AAKTGG+TAGTAY+VSKGA++SLTFSLARE A G+T NGI+PAYVKTPM+ +QL EEQR+++L +IPVGRFCE EE AH VRFL SPLAGFITGE++D NGG MD Sbjct: 3 EPLKDKVAIVTGAAGTMGLAAVKVLLEDGCKVALVDVNEKRTAELATALGPRA---LPFAFDISDAAAVQAGHAAIERALGPVDILLNNAGVLSNNKAEATSPAEWRHVLGANLDGAFYLAQCVVPAMKAQRFGRIINTCSLAAKTGGLTAGTAYSVSKGAMTSLTFSLARELAPFGVTANGISPAYVKTPMITEQLDEEQRQKLLRDIPVGRFCEPEEFAHVVRFLASPLAGFITGEIVDLNGGLLMD 248
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_054669459.1 (SDR family NAD(P)-dependent oxidoreductase [Photobacterium sp. JCM 19050]) HSP 1 Score: 271.9 bits (694), Expect = 2.000e-69 Identity = 140/248 (56.45%), Postives = 180/248 (72.58%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRL----HPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 K+A+VTGA GTLGE+I R ++ G V +D +G TRL D A+ L HP +D+S+ A++ C + ++G V +LVNNAG+L+ NK ET+ EWR+V+ VNLD AF LS++ LP M+ +GRI+NI S+AAKTGG+TAGTAY SKG +++LTFSLARE A G+TVNGIAPAY+KT MVM+QLTE QRE +L IPV RFCEAEEVAH V FL PL+GFITGE++D NGG H+D Sbjct: 6 KVALVTGAGGTLGEAIVRRFVELGMNVVMID--IDG-----TRLLDLAEELGENTHPIAIDLSNEEAIDFACQEVRAKWGKVDILVNNAGILTNNKAAETSSEEWRKVMAVNLDSAFLLSREWLPSMKEHGWGRIINICSLAAKTGGLTAGTAYTTSKGGMTALTFSLAREAAEFGVTVNGIAPAYIKTKMVMEQLTEAQREALLDAIPVRRFCEAEEVAHVVEFLADPLSGFITGEVVDINGGLHLD 246
BLAST of NO01G01340 vs. NCBI_GenBank
Match: EPJ45458.1 (dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase [Osedax symbiont Rs2]) HSP 1 Score: 271.6 bits (693), Expect = 2.600e-69 Identity = 137/244 (56.15%), Postives = 177/244 (72.54%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 KIA+VTG+AG LGE++ R + G V D + L L L +K ++P +D+S AV + C I +G V VLVNNAG+LS NK VET+ EWRRV+ +NLDGAF++S++ LP M+ +GRI+NI S+AAKTGG+TAGTAY SKG ++SLTFSLARE A+ G+T NGI+PAY++TPMV +QLTE QR+ +LA+IPV RFCE EVAH V FL SP +GFITGE+ID NGG H+D Sbjct: 7 KIALVTGSAGALGEAVVRNFVKLGMRVVMADIQESRLHELAAELGNK---VYPLKLDVSDDQAVIQACDEIRVLWGDVDVLVNNAGILSNNKAVETSTQEWRRVMSINLDGAFYMSRECLPGMKAKGWGRIINICSLAAKTGGLTAGTAYTTSKGGMTSLTFSLAREAAQHGVTANGISPAYIRTPMVTEQLTESQRQDLLASIPVKRFCEPSEVAHVVEFLASPHSGFITGEVIDINGGLHLD 247
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_076022002.1 (SDR family NAD(P)-dependent oxidoreductase [Betaproteobacteria bacterium GR16-43] >APV51919.1 3-oxoacyl-ACP reductase [Betaproteobacteria bacterium GR16-43]) HSP 1 Score: 268.1 bits (684), Expect = 2.900e-68 Identity = 142/244 (58.20%), Postives = 171/244 (70.08%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 K A+VTGAAGT+G + R LL++G VA +D + L L L K + T DI+ AV I G V +LVNNAG+LS NK +T EWRRV+ VNLDGAF S+ LP M+ +GRI+N+ S+AAKTGG+TAGTAY+ SKGAL+SLTFSLARE A G+TVNGI+PAYVKTPM+ + LTE QR Q+LA IPVGRFCE EE AH VRFL SPLAGFITGE++D NGG MD Sbjct: 6 KTAVVTGAAGTMGSAAVRFLLEDGAKVALVDVDPKRLEALARSLPGKTLAV---TCDIADPAAVRAAFQRIEAELGTVDILVNNAGILSNNKVEQTGDDEWRRVMGVNLDGAFHWSRSALPGMKARRWGRIINVCSLAAKTGGLTAGTAYSTSKGALTSLTFSLAREAAAHGVTVNGISPAYVKTPMITEGLTEAQRNQLLATIPVGRFCEPEEFAHAVRFLASPLAGFITGEILDVNGGLQMD 246
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_094853459.1 (SDR family NAD(P)-dependent oxidoreductase [Bordetella genomosp. 10] >OZI34467.1 3-oxoacyl-ACP reductase [Bordetella genomosp. 10]) HSP 1 Score: 266.9 bits (681), Expect = 6.400e-68 Identity = 141/247 (57.09%), Postives = 176/247 (71.26%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALD---NRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 ++A+VTGAAGT+G + R LL++G VA +D R + LA D+ F+ DIS V I+ G V +L+NNAG+LS NK V T+ EWR V+ VNLDGAFF ++Q++P M+ GRI+ TS+AAKTGG+TAGTAY+VSKGAL+SLTFSLARE A GIT NGI+PAYVKTPM+ +QLTEEQR+++L IPVGRFCE EE AH VRFL SPLAGFITGE++D NGG MD Sbjct: 12 QVAVVTGAAGTMGLAAARFLLEDGCKVAMVDANAARNQALA------DELGPAARAFSFDISDPEQVRLGHAAIVEELGEVDILLNNAGILSNNKSVSTSTEEWRHVLGVNLDGAFFFARQVIPAMKQRRRGRIITTTSLAAKTGGLTAGTAYSVSKGALASLTFSLARELASFGITANGISPAYVKTPMITEQLTEEQRQKLLKEIPVGRFCEPEEFAHVVRFLASPLAGFITGEVVDINGGLLMD 252
BLAST of NO01G01340 vs. NCBI_GenBank
Match: KYF55033.1 (3-oxoacyl-ACP reductase [Sorangium cellulosum]) HSP 1 Score: 265.4 bits (677), Expect = 1.900e-67 Identity = 137/244 (56.15%), Postives = 168/244 (68.85%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 ++A+VTGA G +G +I R LL EG+ V D L + L D A +P D+S + VE C + R GAV +LVNNAG+LS +K ET EWR+++ VNLDG + LS+ P MR +GRI+N+ S+A KTGG+TAGTAY SKGAL LTFSLARE A G+TVN IAPAYVKT M+ +QLTEEQR+Q L IPVGRFCE EE+AH V FL SPLAGFITGEL+D NGG H+D Sbjct: 17 RVAMVTGAGGAMGAAIARSLLAEGHRVVLADADRAALDAVTASLGDGA---YPILFDLSDSAQVEAACADVRERVGAVEILVNNAGVLSNHKLAETTPEEWRKIMAVNLDGPYHLSRAWAPSMRERRWGRIINMCSVAMKTGGLTAGTAYTASKGALGGLTFSLARELAPHGVTVNAIAPAYVKTKMITEQLTEEQRQQTLKQIPVGRFCEPEEIAHAVLFLSSPLAGFITGELLDINGGLHLD 257
BLAST of NO01G01340 vs. NCBI_GenBank
Match: KYG03893.1 (3-oxoacyl-ACP reductase [Sorangium cellulosum]) HSP 1 Score: 265.0 bits (676), Expect = 2.400e-67 Identity = 136/244 (55.74%), Postives = 169/244 (69.26%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 ++A+VTGA G +G +I R LL EG+ V D L + L D A +P D+S + V+ C + R GAV +LVNNAG+LS +K ET EWR+++ VNLDG + LS++ P MR +GRI+N+ S+A KTGG+TAGTAY SKGAL LTFSLARE A G+TVN IAPAYVKT M+ +QLTEEQR+Q L IPVGRFCE EE+AH V FL SPLAGFITGEL+D NGG H+D Sbjct: 17 RVAMVTGAGGAMGAAIARSLLAEGHRVVLADADRAALDAVTASLGDGA---YPILFDLSDSAQVKAACADVRERVGAVEILVNNAGVLSNHKLAETTPEEWRKIMAVNLDGPYHLSREWAPSMRQRRWGRIINMCSVAMKTGGLTAGTAYTASKGALGGLTFSLARELAPHGVTVNAIAPAYVKTKMITEQLTEEQRQQTLKQIPVGRFCEPEEIAHAVVFLSSPLAGFITGELLDINGGLHLD 257
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_047486646.1 (SDR family NAD(P)-dependent oxidoreductase [Methylibium sp. CF059]) HSP 1 Score: 261.9 bits (668), Expect = 2.100e-66 Identity = 135/248 (54.44%), Postives = 174/248 (70.16%), Query Frame = 0 Query: 10 AATKKIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 A KIA+VTGA GT+G ++ L+++G + +D + +A L + + DIS AV + R G + VLVNNAG+LS NK T+ AEWRRV+ NLDGA F +Q ++P M+ +GRI+N +S+AAKTGG+TAGTAYAVSKGA+S+LTFSLARE A G+T NGIAPAYVKTPM+ +QLTE QR+++L IPVGRFCE EE AHTVRFL SP++GFITGE++D NGG MD Sbjct: 10 ALKDKIALVTGAGGTMGRAVVAALIEDGCRIGLIDVNAQSMAPLEALY---GEAVVAVACDISDQQAVLAAQARVEQRLGPIDVLVNNAGILSNNKIEATSQAEWRRVLGANLDGAMFWAQAVVPGMKARRWGRIINTSSLAAKTGGLTAGTAYAVSKGAMSALTFSLARELAPFGVTANGIAPAYVKTPMITEQLTEAQRQELLKQIPVGRFCEPEEFAHTVRFLASPMSGFITGEILDINGGLLMD 254
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_020736830.1 (3-oxoacyl-ACP reductase FabG [Sorangium cellulosum] >AGP37376.1 hypothetical protein SCE1572_24535 [Sorangium cellulosum So0157-2]) HSP 1 Score: 261.5 bits (667), Expect = 2.700e-66 Identity = 136/241 (56.43%), Postives = 165/241 (68.46%), Query Frame = 0 Query: 17 IVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 +VTGA G +G +I R LL EG+ V D L + L D A +P D+S + VE C + R GAV +LVNNAG+LS +K ET EWR+++ VNLDG + LS+ P MR +GRI+N+ S+A KTGG+TAGTAY SKGAL LTFSLARE A G+TVN IAPAYVKT M+ +QLTEEQR+Q L IPVGRFCE EE+AH V FL SPLAGFITGEL+D NGG H+D Sbjct: 1 MVTGAGGAMGAAIARSLLAEGHRVVLADADRAALDAVTASLGDGA---YPILFDLSDSAQVEAACADVRERVGAVEILVNNAGVLSNHKLAETTPEEWRKIMAVNLDGPYHLSRAWAPSMRERRWGRIINMCSVAMKTGGLTAGTAYTASKGALGGLTFSLARELAPHGVTVNAIAPAYVKTKMITEQLTEEQRQQTLKQIPVGRFCEPEEIAHAVVFLSSPLAGFITGELLDINGGLHLD 238
BLAST of NO01G01340 vs. NCBI_GenBank
Match: WP_046828850.1 (KR domain-containing protein [Afipia massiliensis] >KKY11809.1 3-oxoacyl-ACP reductase [Afipia massiliensis]) HSP 1 Score: 261.2 bits (666), Expect = 3.500e-66 Identity = 137/244 (56.15%), Postives = 169/244 (69.26%), Query Frame = 0 Query: 14 KIAIVTGAAGTLGESITRMLLDEGYLVAALDNRTEGLAGLRTRLDDKADRLHPFTVDISSAPAVEEVCHTILTRFGAVSVLVNNAGLLSKNKCVETNLAEWRRVIHVNLDGAFFLSQQLLPCMRLMHYGRIVNITSMAAKTGGVTAGTAYAVSKGALSSLTFSLARETARDGITVNGIAPAYVKTPMVMDQLTEEQREQVLANIPVGRFCEAEEVAHTVRFLISPLAGFITGELIDQNGGYHMD 258 ++A+VTGAAGT+G + L +G+ VA +D E ++ L ++ D A P T D+S+A + G V +LVNNAG+LS NK ET EW RV+ +NLDGAF LS+ +LP M+ +GRIVN S A K+GG+TAGTAY VSKGAL +LTFSLARE A GITVNGIAPAYVKTPMV +QLTE QRE ++A IPVGRFCE EE AH V F +SPLAGFITGE++D NGG D Sbjct: 9 RVALVTGAAGTMGAATAVRLAADGHRVALVDIAAERVSALAKQIGDVA---VPVTADLSTAEGAAQAVAATERALGPVDILVNNAGILSNNKIAETTPEEWHRVLGINLDGAFHLSRAVLPGMKARRFGRIVNTCSYAMKSGGLTAGTAYTVSKGALQALTFSLAREFAAFGITVNGIAPAYVKTPMVTEQLTEAQREALIAQIPVGRFCEPEEFAHCVAFFVSPLAGFITGEILDLNGGLQFD 249 The following BLAST results are available for this feature:
BLAST of NO01G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01340 ID=NO01G01340|Name=NO01G01340|organism=Nannochloropsis oceanica|type=gene|length=1215bpback to top protein sequence of NO01G01340.1 >NO01G01340.1-protein ID=NO01G01340.1-protein|Name=NO01G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=258bpback to top Synonyms
Publications
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