NO01G01330, NO01G01330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01330 vs. NCBI_GenBank
Match: EWM29081.1 (Protein of unknown function UPF0568 [Nannochloropsis gaditana]) HSP 1 Score: 247.7 bits (631), Expect = 4.600e-62 Identity = 140/281 (49.82%), Postives = 173/281 (61.57%), Query Frame = 0 Query: 1 MAPATTTPADASLRRLLNAMAYPGLAAFTLDDPTEVRKAITWVEDRKIRLYDIDEREPLRTSGPGWNAAFRKYLDDVECPHLVKGEWAAASAQAKVQVLHWLFAKGLACEYVD-EAETYN-----------PAXXXXXXXXXXXXXXXXXXGLPADFHERVHTLATRLGILPSXXXXXXXXXXXXXXXXXXXXXXQTILSVIQLRLSPAAFQATKEGQASDLQLDDFLLSYSTQDPVVDRVARAMTMLYVNDLRELQTDINDILVSAQEFTANPCVGGREG 270 MA +T P +A + RLL+A+ YP L+ F+LDDP +V KA+ ++EDRKIRLYDI++R+PLRT G W+ A +KYL DV+CPH +G+W A S A+V+VLHWLF K LA Y D A+ A +P DF ERV L++RLG LP+ Q ILS+IQLRLSP A ATK+G + L +DDF LSY+T DP+VDR ARA+TMLYV DLRELQTDINDILVSAQEFTANP V EG Sbjct: 20 MALSTRKPNEACIFRLLDALEYPALSTFSLDDPNQVCKAVWYIEDRKIRLYDIEDRKPLRTPGQEWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEAECAARGEHIPVDFDERVRALSSRLG-LPT--PSPSSPNHPTPDPSSLLKTLQGILSIIQLRLSPNAEVATKDGAVARLDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANPYVACLEG 297
BLAST of NO01G01330 vs. NCBI_GenBank
Match: NP_001187769.1 (UPF0568 protein C14orf166 homolog [Ictalurus punctatus] >ADO29098.1 upf0568 protein c14orf166-like protein [Ictalurus punctatus]) HSP 1 Score: 112.5 bits (280), Expect = 2.300e-21 Identity = 79/262 (30.15%), Postives = 112/262 (42.75%), Query Frame = 0 Query: 14 RRLLNAMAYPGLAAFTLDDPTEVRKAITWVEDRKIRLYDIDEREPLRT-SGPGWNAAFRKYLDDVECPHLVKGEWAAASAQAKVQVLHWLFAKGLACEYVDEAETY---NPAXXXXXXXXXXXXXXXXXXGLPADFHERVHTLATRLGILPSXXXXXXXXXXXXXXXXXXXXXXQTILSVIQLRLSPAAF-QATKEGQASDLQLDDFLLSYSTQDPVVDRVARAMTMLYVNDLRELQTDINDILVSAQEFTANPCVGGREGR 271 RR L A+ Y + F D TE R I W+ED+KIR Y I++R LR S W +F KYL DV CP S Q + + + WL + EY D E Y PA DF V LA L I + + ++Q RL+P A +A+K + + LD +L + T D ++ AR + +L++ +LRELQT IN+ +V+ Q NP R G+ Sbjct: 3 RRKLTALDYHNPSGFDCTDETEFRNFIVWLEDQKIRHYKIEDRGNLRNISSSEWPKSFEKYLRDVSCPF---------SVQERCEAIDWLLGLAVRFEYGDNVEKYRNCTPAVEVKNATQKPADPLINLDINNPDFKAGVMALANLLKI---------------QRHDDYLVMLKAVRILVQERLTPEAISKASKSKEGLPVALDKHILGFDTGDATLNEAARILRLLHIEELRELQTRINEAIVAVQAIITNPKTDHRLGK 240
BLAST of NO01G01330 vs. NCBI_GenBank
Match: XP_013771774.1 (UPF0568 protein C14orf166 homolog [Limulus polyphemus]) HSP 1 Score: 112.5 bits (280), Expect = 2.300e-21 Identity = 74/265 (27.92%), Postives = 115/265 (43.40%), Query Frame = 0 Query: 14 RRLLNAMAYPGLAAFTLDDPTEVRKAITWVEDRKIRLYDIDEREPLRT-SGPGWNAAFRKYLDDVECPHLVKGEWAAASAQAKVQVLHWLFAKGLACEYVDEAETYNPAXXXXXXXXXXXXXXXXXXG-------LPADFHERVHTLATRLGILPSXXXXXXXXXXXXXXXXXXXXXXQTILSVIQLRLSPAAFQATKEGQASDLQLDDFLLSYSTQDPVVDRVARAMTMLYVNDLRELQTDINDILVSAQEFTANPCVGGREGR 271 +R L A+ Y +F + D + R + W+ED+KIR Y I++RE LR + W + F++YL VECP + A V+ WL + EY D + Y A DF V TLA L I + I ++++ RLS A ++ Q L + L++ T D V+++ A+ + +LY++DLR+LQT IN+ +V+ Q TANP + GR Sbjct: 3 KRKLTALGYHNPESFNVTDENDFRNVVVWLEDQKIRFYKIEDREDLRNINNSNWESVFKQYLKHVECPFDLSDRNA---------VIDWLLGFSVRLEYGDSVKKYKDASAENVKKNLVNAPQVIQENPLDNLDFEDKDFKAGVSTLARLLNI---------------TEHPDHLVTLKAICTLVKNRLSVEAVSKKEKPQGKPFPLHESSLAFDTGDYVMNQAAKVLRLLYIHDLRDLQTQINEAIVAVQTITANPKTDTKLGR 243
BLAST of NO01G01330 vs. NCBI_GenBank
Match: XP_016389890.1 (PREDICTED: UPF0568 protein C14orf166 homolog [Sinocyclocheilus rhinocerous]) HSP 1 Score: 111.7 bits (278), Expect = 3.900e-21 Identity = 81/262 (30.92%), Postives = 114/262 (43.51%), Query Frame = 0 Query: 14 RRLLNAMAYPGLAAFTLDDPTEVRKAITWVEDRKIRLYDIDEREPLRT-SGPGWNAAFRKYLDDVECPHLVKGEWAAASAQAKVQVLHWLFAKGLACEYVDEAETY---NPAXXXXXXXXXXXXXXXXXXGLPADFHERVHTLATRLGILPSXXXXXXXXXXXXXXXXXXXXXXQTILSVIQLRLSPAAF-QATKEGQASDLQLDDFLLSYSTQDPVVDRVARAMTMLYVNDLRELQTDINDILVSAQEFTANPCVGGREGR 271 RR L A+ Y + F D TE + I W+ED+KIR Y I+ER LR W F KYL DV CP SAQ + + + WL + EY D E Y PA P DF V LA L I + I +IQ RL+P A +A++ + + LD +L + T D ++ AR + +L++ +LRELQT+IN+ +V+ Q A+P R G+ Sbjct: 3 RRKLTALDYHNPSGFDCKDETEFKNFIVWLEDQKIRHYKIEERGNLRNIPSSDWPKHFEKYLQDVNCPF---------SAQERQETVDWLLGLAVRFEYGDNVEKYRNCKPATEASDDQKSVDPLINLDSNNP-DFKAGVLALANLLKI---------------QRHEDYLVMLKAIRILIQERLTPDAIAKASQSKEGLPVALDKHILGFDTGDATLNEAARVLRLLHIEELRELQTNINEAIVAVQAIIADPKTDHRLGK 239
BLAST of NO01G01330 vs. NCBI_GenBank
Match: XP_002167006.2 (PREDICTED: UPF0568 protein C14orf166 homolog [Hydra vulgaris]) HSP 1 Score: 110.9 bits (276), Expect = 6.700e-21 Identity = 73/251 (29.08%), Postives = 116/251 (46.22%), Query Frame = 0 Query: 15 RLLNAMAYPGLAAFTLDDPTEVRKAITWVEDRKIRLYDIDEREPLRT-SGPGWNAAFRKYLDDVECPHLVKGEWAAASAQAKVQVLHWLFAKGLACEYVDEAETYNPAXXXXXXXXXXXXXXXXXXGLPADFHERVHTLATRLGILPSXXXXXXXXXXXXXXXXXXXXXXQTILSVIQLRLSPAAFQATKEGQASD--LQLDDFLLSYSTQDPVVDRVARAMTMLYVNDLRELQTDINDILVSAQEFTANP 263 R L A+ Y F + D ++ R I W+ED+KIR Y I+ER+ LR + PGW A ++YL D++CP + K V+HWL + + +Y++ A YN + A +++LA +L +P Q I S+I+ RLS A+ + ++ S L+L++ L +S D V + + +L +N LRELQT IN +V+ Q +ANP Sbjct: 4 RKLKALDYYQSENFNIQDESQARNLIVWLEDKKIRFYKIEERDALRNITSPGWVQALKQYLKDLQCP--------VVNLSNKAAVVHWLLSHAVKIQYLENASHYNTPSSDQFQEKMFSNLTINDPSVQAS----INSLA-KLFHIPQ--------------HDDKLILLQAITSIIEQRLSEASIKENQKQCKSGFVLKLEEVPLGFSMPDEGVTEALKILRLLQINHLRELQTQINQAIVAVQRISANP 227
BLAST of NO01G01330 vs. NCBI_GenBank
Match: KFM77172.1 (hypothetical protein X975_23193, partial [Stegodyphus mimosarum]) HSP 1 Score: 110.5 bits (275), Expect = 8.700e-21 Identity = 75/258 (29.07%), Postives = 109/258 (42.25%), Query Frame = 0 Query: 14 RRLLNAMAYPGLAAFTLDDPTEVRKAITWVEDRKIRLYDIDEREPLRT-SGPGWNAAFRKYLDDVECPHLVKGEWAAASAQAKVQVLHWLFAKGLACEYVDEAETYNPAXXXXXXXXXXXXXXXXXXGLPAD--------FHERVHTLATRLGILPSXXXXXXXXXXXXXXXXXXXXXXQTILSVIQLRLSPAAFQATKEGQASDLQLDDFLLSYSTQDPVVDRVARAMTMLYVNDLRELQTDINDILVSAQEFTANP 263 RR L A+ Y + F + T+ R + W+ED+ IR Y I+ R PLR S P W AF+ YL+ V CP + E V WL + EY D E Y P D F V +LA LG+ P + +VIQ + A TK+ + + L + T DPV+D+ A+ + + +++DLR+LQT IN+I+V+ Q+ TANP Sbjct: 4 RRKLEALGYIKIDDFNVFSDTDFRTLVVWLEDQVIRQYPIENRAPLRVISSPDWEDAFKTYLEAVACPFTDREE-----------VADWLLGYAVRLEYGDNVEQYKSVTAESLNQMSSNVPQVKAKN-PLDNMDFESTEFKGHVKSLAQLLGVSP---------------HPDHLETLSAVCTVIQNSFTEALENKTKKKDGKPSPVMELPLGFDTGDPVLDKAAKILRLCFIHDLRDLQTKINEIIVAVQKVTANP 234
BLAST of NO01G01330 vs. NCBI_GenBank
Match: XP_016331227.1 (PREDICTED: UPF0568 protein C14orf166 homolog [Sinocyclocheilus anshuiensis]) HSP 1 Score: 110.5 bits (275), Expect = 8.700e-21 Identity = 81/262 (30.92%), Postives = 113/262 (43.13%), Query Frame = 0 Query: 14 RRLLNAMAYPGLAAFTLDDPTEVRKAITWVEDRKIRLYDIDEREPLRT-SGPGWNAAFRKYLDDVECPHLVKGEWAAASAQAKVQVLHWLFAKGLACEYVDEAETY---NPAXXXXXXXXXXXXXXXXXXGLPADFHERVHTLATRLGILPSXXXXXXXXXXXXXXXXXXXXXXQTILSVIQLRLSPAAF-QATKEGQASDLQLDDFLLSYSTQDPVVDRVARAMTMLYVNDLRELQTDINDILVSAQEFTANPCVGGREGR 271 RR L A+ Y F D TE + I W+ED+KIR Y I+ER LR W F KYL DV CP SAQ + + + WL + EY D E Y PA P DF V LA L I + I +IQ RL+P A +A++ + + LD +L + T D ++ AR + +L++ +LRELQT+IN+ +V+ Q A+P R G+ Sbjct: 3 RRKLTALDYHNPPGFDCKDETEFKNFIVWLEDQKIRHYKIEERGNLRNIPSSDWPKHFEKYLQDVNCPF---------SAQERQETVDWLLGLAVRFEYGDNVEKYRNCKPATEASDAQKSVDPLINLDSNNP-DFKAGVLALANLLKI---------------QRHEDYLVMLKAIRILIQERLTPDAIAKASQAKEGLPVALDKHILGFDTGDATLNEAARVLRLLHIEELRELQTNINEAIVAVQAIIADPKTDHRLGK 239
BLAST of NO01G01330 vs. NCBI_GenBank
Match: XP_004226325.1 (PREDICTED: UPF0568 protein C14orf166 homolog [Ciona intestinalis]) HSP 1 Score: 109.8 bits (273), Expect = 1.500e-20 Identity = 75/268 (27.99%), Postives = 120/268 (44.78%), Query Frame = 0 Query: 14 RRLLNAMAYPGLAAFTLDDPTEVRKAITWVEDRKIRLYDIDEREPLRT-SGPGWNAAFRKYLDDVECPHLVKGEWAAASAQAKVQVLHWLFAKGLACEYVDEAETYN-----PAXXXXXXXXXXXXXXXXXXGLPADFHERVHTLATRLGILPSXXXXXXXXXXXXXXXXXXXXXXQTILSVIQLRLSPAAFQATKE-----GQASDLQLDDFLLSYSTQDPVVDRVARAMTMLYVNDLRELQTDINDILVSAQEFTANPCVGGREGR 271 +R LNA+ YP + F + ++ + W+ED+KIR Y ++ R L+T + W AA KYL DV+ P K + V+ WL + EY D+ E YN +F V +LA L I + + +I+ RLS A +A K G+A + +DD L + T DP++++ A+A+ +L++N+LR+LQT +N+ +V+ Q TANP R G+ Sbjct: 3 KRKLNALGYPKSSTFDPSVVEQCKELVIWLEDQKIRHYKVENRVFLKTANAKSWPAALEKYLKDVDYPFTKKNQ---------NMVIDWLLGLAVRLEYGDDVEKYNSVSPEKVEKPKENGASAKSPLQDINEKSMEFRTGVRSLAKVLDI---------------PIHPDDTVTLEAVKILIEERLSTPALEAAKTTSKPVGRA--VPIDDIKLGFDTGDPMINKAAKALRLLHINELRKLQTQVNEAIVAVQAITANPKTDQRLGK 244
BLAST of NO01G01330 vs. NCBI_GenBank
Match: KTF72613.1 (hypothetical protein cypCar_00048640 [Cyprinus carpio]) HSP 1 Score: 109.8 bits (273), Expect = 1.500e-20 Identity = 80/262 (30.53%), Postives = 112/262 (42.75%), Query Frame = 0 Query: 14 RRLLNAMAYPGLAAFTLDDPTEVRKAITWVEDRKIRLYDIDEREPLRT-SGPGWNAAFRKYLDDVECPHLVKGEWAAASAQAKVQVLHWLFAKGLACEYVDEAETY---NPAXXXXXXXXXXXXXXXXXXGLPADFHERVHTLATRLGILPSXXXXXXXXXXXXXXXXXXXXXXQTILSVIQLRLSPAAF-QATKEGQASDLQLDDFLLSYSTQDPVVDRVARAMTMLYVNDLRELQTDINDILVSAQEFTANPCVGGREGR 271 RR L A+ Y F D TE R I W+ED+KIR Y I+ER LR W + KYL DV CP S Q + + + WL + EY D E Y PA P DF V LA L I + I +IQ RL+P A +A++ + + LD +L + T D ++ AR + +L++ +LRELQT+IN+ +V+ Q A+P R G+ Sbjct: 3 RRKLTALEYHNPTGFDCKDDTEFRNIIVWLEDQKIRHYKIEERGNLRNIPSSDWPKHYEKYLQDVNCPF---------SVQERQETVDWLLGLAVRFEYGDNVEKYRNCKPATEASDAKKTVDPLINLDSNNP-DFKAGVLALANLLKI---------------QRHEDYSVMLKAIKILIQERLTPDAIAKASQAKEGLPVALDKHILGFDTGDATLNEAARILRLLHIEELRELQTNINEAIVAVQAIIADPKTDHRLGK 239
BLAST of NO01G01330 vs. NCBI_GenBank
Match: NP_001088113.1 (RNA transcription, translation and transport factor protein [Xenopus laevis] >Q63ZS0.1 RecName: Full=RNA transcription, translation and transport factor protein >AAH82840.1 LOC494815 protein [Xenopus laevis] >OCT68369.1 hypothetical protein XELAEV_18039668mg [Xenopus laevis]) HSP 1 Score: 109.8 bits (273), Expect = 1.500e-20 Identity = 81/261 (31.03%), Postives = 111/261 (42.53%), Query Frame = 0 Query: 14 RRLLNAMAYPGLAAFTLDDPTEVRKAITWVEDRKIRLYDIDEREPLRT-SGPGWNAAFRKYLDDVECPHLVKGEWAAASAQAKVQVLHWLFAKGLACEYVDEAETYNPAXXXXXXXXXXXXXXXXXXGLPADFHERVHTLATRLGILPSXXXXXXXXXXXXXXXXXXXXXXQTILSVIQLRLSPAAF---QATKEGQASDLQLDDFLLSYSTQDPVVDRVARAMTMLYVNDLRELQTDINDILVSAQEFTANPCVGGREGR 271 RR L A+ Y A F D TE R + W+ED+KIR Y I+ER LR W A + KYL+DV CP V Q + + + WL + EY D A Y A DF V LA L I + I ++Q RLS A + KEG + LD +L + T D V++ AR + +L++ +LRELQT IN+ +V+ Q A+P R G+ Sbjct: 3 RRKLQALDYHNPAGFNFKDETEFRNFLVWLEDQKIRHYKIEERGNLRNIHSSEWPAQYEKYLNDVNCPFKV---------QERQESIDWLLGLAVRLEYGDNAAKYQNAKPYNSDVSKSAEPLINLDVNNPDFKAGVMALANLLQI---------------QRHDDYLMMLKAIRILVQERLSQEAVAKSNSAKEG--LPVALDKHILGFDTGDAVLNDAARILRLLHIEELRELQTKINEAIVAVQAIIADPKTDHRLGK 237 The following BLAST results are available for this feature:
BLAST of NO01G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01330 ID=NO01G01330|Name=NO01G01330|organism=Nannochloropsis oceanica|type=gene|length=1099bpback to top protein sequence of NO01G01330.1 >NO01G01330.1-protein ID=NO01G01330.1-protein|Name=NO01G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=295bpback to top Synonyms
Publications
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