NO01G01280, NO01G01280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01280 vs. NCBI_GenBank
Match: EWM29094.1 (ycii-like protein [Nannochloropsis gaditana]) HSP 1 Score: 559.7 bits (1441), Expect = 7.600e-156 Identity = 281/377 (74.54%), Postives = 318/377 (84.35%), Query Frame = 0 Query: 34 PAASRRHNRTMATVPPFSLLLLSFLLLALPTTISAFLF--YPNRLSGRAAGAVPRIQLLAPAGPSSSTPSYGVYQHNTVLYARRRRKGDSDADYERFDLDELRVEKRFEEVEEIDPEMFRPSKMEYYVPPPVEEIEQWDVTDTRYIAIGLDRDGDEIFREQRLPNCYLHLAWARRSYLDQRSPVSVWWDYALVREDLQGNRGNLFGMNASSASLVKAFVELDPYKKLGVYKSLKGYRWNPLKDPDLLYAPRVQFAVVALDKADALPLRMATREAHLAYMRSSGRVVTAGPLFDLDAEDGSPVGSLVVFNAEDTEEARAFIADDPYMKAGLFGETFLTQLAELDVTGQHLDRQWEKYQMEENHYDPVHDLMVGWGLIK 409 PAAS RH R AT LL SFLLL + + + +F F +P +GR G+V + P G SS+ PS VL+ARRRRKGDSDAD+ERF+LDELR EKRFEEVEE+DPEMFRPSKMEYYVPPPV++IE WD+TDTRY+A+GLD+DGDE+F EQRLPNCYLHLAWARRSYLD+RSPVSVWWDYALVR+DLQGNRGNLFGMNASS SLVKAFVELDPYKKLGVYKSL GY W PLK+PDLLYAPR+QFA++ LDK ALP+RM TREAHLAYMR S R+VTAGPLF LDAE+GSPVGSLV+FNAE+ EEA AFI +DPY KAGLF E+FLTQ+AELDVTGQHLDR+WEKYQ+EENHYDPVHDLMVGWGL+K Sbjct: 23 PAASSRH-RHCAT-----LLFCSFLLLDIVSPVFSFHFNTFPLLNAGRIRGSV---GAMTPFGQSSTRPS---ISSPVVLHARRRRKGDSDADFERFNLDELRDEKRFEEVEEMDPEMFRPSKMEYYVPPPVDDIEHWDMTDTRYVAVGLDKDGDEVFHEQRLPNCYLHLAWARRSYLDERSPVSVWWDYALVRDDLQGNRGNLFGMNASSPSLVKAFVELDPYKKLGVYKSLTGYHWRPLKEPDLLYAPRLQFALIGLDKEGALPVRMQTREAHLAYMRKSKRIVTAGPLFSLDAEEGSPVGSLVIFNAENLEEAGAFIQNDPYAKAGLFKESFLTQVAELDVTGQHLDREWEKYQLEENHYDPVHDLMVGWGLVK 387
BLAST of NO01G01280 vs. NCBI_GenBank
Match: CEM18694.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 94.0 bits (232), Expect = 1.200e-15 Identity = 60/239 (25.10%), Postives = 101/239 (42.26%), Query Frame = 0 Query: 175 RYIAIGLDRDGDEIFREQRLPNCYLHLAWARRSYLDQRSPVSVWWDYALVREDLQGNRGNLFGMNASSASLVKAFVELDPYKKLGVYKSLKGYRWNPLKDPDLL---YAPRVQFAVVALDK-ADALPLRMATREAHLAYMRSSGRVVTAGPL--------FDLD----------------------AEDGSPVGSLVVFNAEDTEEARAFIADDPYMKAGLFGETFLTQLAELDVTGQH 380 +++ + LD+ G E + R P H+ WAR S + + V WD + E + GNL + A + K F E +PY G+Y+ + + W+ + D L+ + F V D A +R E H Y+ VV +G L +LD + +PVG + + + E+A+ + DP+ +AGL+ F+ Q+ LD+TG+H Sbjct: 219 KFLVVALDKPGFEWYNYGRHPQMVDHIVWARLSLRLRNATAKVLWDMTIYNETSRHGCGNLINIAAPTLKHAKEFAEKNPYFSSGLYRHHEIFEWHDIADEHLMMGAWKGEDTFLVFGKDSDLTAAKIREQLEEKHHRYLCRCANVVHSGSLKPPRQDSQEELDRPVKQIVPLIWQLKGPNPVGAMPNNETPVGEMSIITCDSLEQAKDYARRDPFTRAGLYKNLFVAQVVHLDITGRH 457
BLAST of NO01G01280 vs. NCBI_GenBank
Match: CBN76233.1 (COG2350: Uncharacterized protein conserved in bacteria [Ectocarpus siliculosus]) HSP 1 Score: 92.8 bits (229), Expect = 2.600e-15 Identity = 63/216 (29.17%), Postives = 104/216 (48.15%), Query Frame = 0 Query: 200 HLAWAR---RSYLDQRS-PVSVWWDYALVREDLQGNRGNLFGMNASSASLVKAFVELDPYKKLGVYKSLKGYRW-NPLKDPDLLYAPRVQFAVVALDKADALPLRMATREAHLAYMRSSGRVVTAGPLFDLD-AED---GSPVGSLVVFNAEDTEEARAFIADDPYMKAGLFGETFLTQLAELDVTGQHLDRQWEKYQMEENHYDPVHDLMVGWGL 407 H+ WAR R++ D + W+ +++ GN+F + + + +E DPY+K G++ ++ YR+ + + + + +DK + LR +AHL Y + R + GP+ D AED PVGSL+ FNA + EEAR DP+ +AGL+ F+ + E+D++G L R N DP+ D+M GL Sbjct: 213 HVKWARIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKEGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGSAKLREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVR--------ANRIDPMRDMMAKEGL 420
BLAST of NO01G01280 vs. NCBI_GenBank
Match: XP_002286598.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96239.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 84.7 bits (208), Expect = 7.200e-13 Identity = 67/229 (29.26%), Postives = 107/229 (46.72%), Query Frame = 0 Query: 200 HLAWARRSYL-----DQRSPVSVWWDYALVREDLQGNRGNLFGMNASSASLVKAFVELDPYKK--LGV-------YKSLKGYRWNPLKDPDLLY---APRVQFAVVALDKADALP--LRMATREAHLAYMRSSGRVVTAGPLFDLDAEDGSP----VGSLVVFNAEDTEEARAFIADDPYMKAGLFGETFLTQLAELDVTGQHLDRQWEKYQMEENHYDPVHDLMVGWG 406 H+ WAR+ L + S V W + L+ DLQ G++ +++ + + + DP + LGV S+ YRW ++D L + ++A D+ +A+ LR HL Y+ S RV+ AGPL E P VG+L+++NA+D E A F+ +DP AGL+ + + LDVTG+ + Y E+N Y + + M WG Sbjct: 126 HVMWARKQNLYNDTFNMESMADVLWSHQLLSSDLQRTIGHVMCIDSPTIQHCRDALSNDPIVRSLLGVDSNGLCDASSIPLYRWRHIRDHTLRRDDGRDGLPNMLLAFDRPEAMSRGLRDEISNEHLEYLIRSERVIAAGPLHVATEEKSDPKSVAVGTLMLYNAKDREHAVEFVENDPAALAGLYESMTVHRYNSLDVTGKFVSE--NLYFPEQNTYQ-MKEAMGYWG 351
BLAST of NO01G01280 vs. NCBI_GenBank
Match: OYX32707.1 (hypothetical protein B7Y99_08215 [Caulobacterales bacterium 32-69-10]) HSP 1 Score: 82.8 bits (203), Expect = 2.700e-12 Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 285 FAVVALDKADALPLRMATREAHLAYMRSSGRVVTAGPLFDLDAEDGSPVGSLVVFNAEDTEEARAFIADDPYMKAGLFGE 365 F + LDK D+LPLR+A R+ HLAYM +SG V GP D E G+P GSLV+ AE E RAF+ D+PY KAGL E Sbjct: 4 FVISFLDKPDSLPLRLANRDEHLAYMAASGMVRLGGPYLD---EAGNPKGSLVIVEAESEEAVRAFMKDEPYNKAGLIPE 80
BLAST of NO01G01280 vs. NCBI_GenBank
Match: XP_009036301.1 (hypothetical protein AURANDRAFT_63580 [Aureococcus anophagefferens] >EGB09191.1 hypothetical protein AURANDRAFT_63580 [Aureococcus anophagefferens]) HSP 1 Score: 80.5 bits (197), Expect = 1.400e-11 Identity = 73/235 (31.06%), Postives = 104/235 (44.26%), Query Frame = 0 Query: 168 QWDVTDTRYIAIGLDRDGDEIFREQRLPNCYLHLAWARRSYL--DQRSPVSVWWDYALVREDLQGNRGNLF--------GMNASSASLVKAFVELDPYKKLGVYKSLK--GYRWNPLKDP----DLLYAPRVQFAVVALDKADALPLRMATREAHLAYMRSSGRVVTAGPLFDLDAEDGSPVGSLVVFNAEDTEEARAFIADDPYMKAGLFGETFLTQLA----ELDVTGQHLDR 383 +W + ++ +DG++ R R HL WAR S + D+ V+ + Q +RG++ G AS+A LV A DP + GV+ + Y W DP D+ + + LD R ATRE HL+++R + R + AGPL L G+PVGSLV A + A DPY+ AG+FG+ A ELDVTG L R Sbjct: 95 EWVIPGEAFVFARFLKDGEK-SRALRRTLHLDHLFWARESAIVADRDGGPRVY-----AAQAAQDDRGDVVASVVAVVGGDAASAAPLVAA----DPLVRAGVFDEARSGAYHWTIAGDPYLQADVWPDGESPYLHLKLDAQPGANARGATREKHLSFLRKTRRTMRAGPLRPLGDAAGAPVGSLVYAFHASRGAALDWAAADPYVDAGVFGDGVQPLAAATYCELDVTGTQLTR 319
BLAST of NO01G01280 vs. NCBI_GenBank
Match: WP_085790717.1 (hypothetical protein [Roseivivax jejudonensis] >SLN24724.1 YciI-like protein [Roseivivax jejudonensis]) HSP 1 Score: 80.5 bits (197), Expect = 1.400e-11 Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = 0 Query: 286 AVVALDKADALPLRMATREAHLAYMRSSGRVVTAGPLFDLDAEDGSPVGSLVVFNAEDTEEARAFIADDPYMKAGLFGETFLTQ 370 A++A DK DAL +RMA REAHLAY+ +G V AGPL E+G+ GSLV+ + D A A+ ADDPY +AGLF L + Sbjct: 4 ALIARDKPDALEIRMANREAHLAYVEQTGVVAQAGPLI----ENGAMAGSLVILDVPDLAAAEAWAADDPYARAGLFARVELVE 83
BLAST of NO01G01280 vs. NCBI_GenBank
Match: WP_058313542.1 (YciI family protein [Thalassobius activus] >CUI40077.1 YciI-like protein [Thalassobius activus] >CUK24540.1 YciI-like protein [Thalassobius activus]) HSP 1 Score: 79.7 bits (195), Expect = 2.300e-11 Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 0 Query: 283 VQFAVVALDKADALPLRMATREAHLAYMRSSGRVVTAGPLFDLDAEDGSPVGSLVVFNAEDTEEARAFIADDPYMKAGLFGETFLT 369 ++FA++A DK +AL +R+A R+AH+AY++SS V AGP D DG+ GSL+V ED EA+A+ A+DPY KA LF +T Sbjct: 1 MRFALIAKDKPNALDVRLANRDAHVAYLKSSDAVEMAGPFLD---ADGNMCGSLIVLEFEDIAEAQAWAANDPYKKADLFQSVEIT 83
BLAST of NO01G01280 vs. NCBI_GenBank
Match: WP_095638402.1 (hypothetical protein [Paracoccus sp. WN007] >PAU98683.1 hypothetical protein CK240_00625 [Paracoccus sp. WN007]) HSP 1 Score: 79.0 bits (193), Expect = 3.900e-11 Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 0 Query: 285 FAVVALDKADALPLRMATREAHLAYMRSSGRVVTAGPLFDLDAEDGSPVGSLVVFNAEDTEEARAFIADDPYMKAGLF 363 FAV+ DK L RM TREAHLA++ SGRV AGP EDG+P GSL++ A+D + A+A++A+DPY A +F Sbjct: 4 FAVICRDKPGRLNARMTTREAHLAWLNGSGRVQLAGPFL----EDGNPCGSLLIIEADDLDAAKAWVAEDPYAAADVF 77
BLAST of NO01G01280 vs. NCBI_GenBank
Match: WP_076532724.1 (YciI family protein [Gemmobacter megaterium] >SIT14600.1 hypothetical protein SAMN05421774_106175 [Gemmobacter megaterium]) HSP 1 Score: 78.6 bits (192), Expect = 5.100e-11 Identity = 41/85 (48.24%), Postives = 53/85 (62.35%), Query Frame = 0 Query: 285 FAVVALDKADALPLRMATREAHLAYMRSSGRVVTAGPLFDLDAEDGSPVGSLVVFNAEDTEEARAFIADDPYMKAGLFGETFLTQ 370 FA+ LDK AL +R+ R AHL ++ +SG+VV AGP + D +PVGSLVV A D EA AF DPY KAGLF + + + Sbjct: 3 FALTCLDKPGALQIRLDNRAAHLDFLNASGKVVFAGPFIEAD----TPVGSLVVIEAADRTEAEAFATADPYAKAGLFHDVTIRE 83 The following BLAST results are available for this feature:
BLAST of NO01G01280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01280 ID=NO01G01280|Name=NO01G01280|organism=Nannochloropsis oceanica|type=gene|length=1236bpback to top protein sequence of NO01G01280.1 >NO01G01280.1-protein ID=NO01G01280.1-protein|Name=NO01G01280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=412bpback to top Synonyms
Publications
|