NO01G01250, NO01G01250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_017788337.1 (PREDICTED: transmembrane protein C5orf28 [Habropoda laboriosa] >KOC66932.1 Transmembrane protein C5orf28 [Habropoda laboriosa]) HSP 1 Score: 78.2 bits (191), Expect = 4.900e-11 Identity = 59/197 (29.95%), Postives = 89/197 (45.18%), Query Frame = 0 Query: 61 DNATHAFLALLIWWAVLAPPLXXXXXXXXXXXXXXXXYHRSLQTPRYQFGNERLELLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIV 258 DN THAF+ L W +L+ S ++ F + +L +F L S +D+DHF+AA + W L A L+ RP HC T + + W ++ + N+ + YS + L++ LSH +RD RRG+WFC IG ST PIP+ +YL + +MLP I+ Sbjct: 42 DNVTHAFVGGLTWAVILS---------------------LSKKSLIQNFSS----ILCSFCLSSIIDVDHFIAACN-WKLSDATHLEKRPFLHCTT----VPIIIWLTMNLYSSMFNQPKYSY------------------------YSWIVLASFLSHHIRDGTRRGLWFCLIG-STQPIPYYLYLTISMMLPHIL 183
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_003703854.1 (PREDICTED: transmembrane protein C5orf28 [Megachile rotundata]) HSP 1 Score: 77.8 bits (190), Expect = 6.400e-11 Identity = 50/143 (34.97%), Postives = 72/143 (50.35%), Query Frame = 0 Query: 116 LLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVR 259 + F L S +D+DHF+AA S W ++ A L+ RP HC T +L W + + N + YS + L++ LSH +RDA RRG+WFC IG ST PIP+ +YLIM +MLP +++ Sbjct: 72 IFCCFCLSSFIDVDHFIAACS-WKINDATHLEKRPFLHCTTVPISL----WFIFNFYSNVLNYPKFSY------------------------YSWIILASFLSHHIRDATRRGLWFCPIG-STQPIPYYLYLIMSMMLPHVLQ 184
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_008615759.1 (hypothetical protein SDRG_11494 [Saprolegnia diclina VS20] >EQC30735.1 hypothetical protein SDRG_11494 [Saprolegnia diclina VS20]) HSP 1 Score: 76.6 bits (187), Expect = 1.400e-10 Identity = 55/195 (28.21%), Postives = 78/195 (40.00%), Query Frame = 0 Query: 60 LDNATHAFLALLIWWAVLAPPLXXXXXXXXXXXXXXXXYHRSLQTPRYQFGNERLELLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLP 255 +DNA HA +ALL W ++ PR LE + A GS LDLDHF+ A W+ A L +RP GH + + A+ L W + + VR L+ LSH LRD+ RRG+W + ST P+P+ IYL++ ++LP Sbjct: 84 VDNAAHATIALLSWALTC-----------------------TVAFPRLSL--RPLEGVAALFTGSLLDLDHFIVAAG-WSFRAATSLSERPFGHAVAFVAAIALLTWWTCPVAH-------------------------------RVRAVAFVLACLLSHHLRDSYRRGLWIAPVVGSTPPVPYPIYLVLEILLP 221
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_012193605.1 (hypothetical protein SPRG_00100 [Saprolegnia parasitica CBS 223.65] >KDO35254.1 hypothetical protein SPRG_00100 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 76.3 bits (186), Expect = 1.900e-10 Identity = 69/228 (30.26%), Postives = 92/228 (40.35%), Query Frame = 0 Query: 28 LLPAACLAGDLLL-PRVLIPLSTTTPPLLLCLGLDNATHAFLALLIWWAVLAPPLXXXXXXXXXXXXXXXXYHRSLQTPRYQFGNERLELLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLP 255 LL + CL D LL RVL L+ L +DNA HA +ALL W ++ PR+ LE + A GS LDLDHF+ A W+ A L +RP GH + + AL L W + VR L+ LSH LRD+ RRG+W + ST P+P+ IYL++ V+LP Sbjct: 56 LLLSICLLSDSLLHHRVLERLAH------LYGLMDNAAHATIALLSWALTC-----------------------TVAFPRHSL--RPLEGVAALFTGSLLDLDHFIVAAG-WSFRAATSLSERPFGHAVVFVAALALLTWWTCPVAR-------------------------------RVRAVAFVLACLLSHHLRDSYRRGLWIAPVVGSTPPVPYPIYLVLEVLLP 220
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_015430695.1 (PREDICTED: transmembrane protein C5orf28 [Dufourea novaeangliae]) HSP 1 Score: 76.3 bits (186), Expect = 1.900e-10 Identity = 48/143 (33.57%), Postives = 73/143 (51.05%), Query Frame = 0 Query: 116 LLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVR 259 ++ F+L S +D+DHF+AA S W ++ A L+ RP HC T + + W + + + N + YS + L++ LSH +RD RRG+WFC IG ST PIP+ +YL M +MLP I++ Sbjct: 72 IVCCFLLSSFIDVDHFIAAWS-WKINDATHLEKRPFLHCTT----VPIVLWFLMNFYSNVFNYPKLSY------------------------YSWIVLASFLSHHIRDGTRRGLWFCPIG-STQPIPYYLYLSMSMMLPHILQ 184
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_017890401.1 (PREDICTED: transmembrane protein C5orf28 [Ceratina calcarata]) HSP 1 Score: 76.3 bits (186), Expect = 1.900e-10 Identity = 48/139 (34.53%), Postives = 70/139 (50.36%), Query Frame = 0 Query: 120 FVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVR 259 F L S +D+DHF+AA S W L A+ L+ RP HC T L + W + + N + Y+ + L++ LSH +RDA RRG+WFC IG +T PIP+ +YL M +MLP +++ Sbjct: 76 FALSSFIDVDHFIAACS-WRLSDAVHLQKRPFFHCTT----LPIVLWLVLNFYANVFNHPKLGY------------------------YTWMMLTSFLSHHIRDATRRGLWFCPIG-NTQPIPYHLYLSMSMMLPHVLQ 184
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_023021150.1 (transmembrane protein 267 [Leptinotarsa decemlineata]) HSP 1 Score: 76.3 bits (186), Expect = 1.900e-10 Identity = 52/144 (36.11%), Postives = 70/144 (48.61%), Query Frame = 0 Query: 114 LELLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIV 258 LE+ V+ S +D+DHF AA S + L A+ LK+RPP HC T ++ L + Y S N R +LL L+A LSH RDA RRG WF G ST PIP+G+Y+I+ +P +V Sbjct: 70 LEIAACTVMSSFIDIDHFFAARS-FQLKDAISLKNRPPLHCSTFPLSICVL-MLLVSYILQSWNLE---------------------------RITLLILTAFLSHHTRDATRRGYWFFPYG-STPPIPYGLYIILTCCIPYLV 183
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_013070509.1 (PREDICTED: transmembrane protein C5orf28 homolog [Biomphalaria glabrata]) HSP 1 Score: 75.9 bits (185), Expect = 2.400e-10 Identity = 68/235 (28.94%), Postives = 98/235 (41.70%), Query Frame = 0 Query: 27 ALLPAACLAGDLLLPRVLIPLSTTTPPLLLCLGLDNATHAFLALLIWWAVLAPPLXXXXXXXXXXXXXXXXYHRSLQTPRYQFGNER---LELLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVR 259 +LL CL GD +L ++ +L D+ THA + L+W Y+F E+ L +L L +++DLDHF+AAGSL +L AL L+ RPP H + + A+ LCW Y + +SL+FL++ LSH LRDA RG+W G T P +Y+ +IV+L LIVR Sbjct: 27 SLLSMVCLLGDYILVKL---SGIQENGNILRAVTDSTTHASVGALVW----------------------------AVAEGYEFLGEKKKWLNVLFCAFLAASVDLDHFMAAGSL-DLKKALHLQHRPPFHITSLIPAVVFLCWIIGYY------------------------------RPSMKVFSLMFLASWLSHHLRDANHRGLWLAPFG-HTPVFPSVVYIFLIVVLSLIVR 198
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_003392988.1 (transmembrane protein 267 isoform X1 [Bombus terrestris]) HSP 1 Score: 75.1 bits (183), Expect = 4.200e-10 Identity = 49/140 (35.00%), Postives = 68/140 (48.57%), Query Frame = 0 Query: 119 AFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVR 259 +F L S +D+DHF+AA S W L A L+ RP HC T L W + + N + YS + L++ LSH +RD RRG+WFC IG ST PIP+ +YL M +MLP +++ Sbjct: 75 SFCLSSFIDVDHFIAACS-WKLSDATHLEKRPFFHCTT----LPITIWIMLSFYASVFNYPKLSY------------------------YSWIILASFLSHHIRDGTRRGLWFCPIG-STRPIPYYLYLSMSMMLPHVLQ 184
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_012534367.1 (PREDICTED: transmembrane protein C5orf28 [Monomorium pharaonis]) HSP 1 Score: 75.1 bits (183), Expect = 4.200e-10 Identity = 51/140 (36.43%), Postives = 68/140 (48.57%), Query Frame = 0 Query: 120 FVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCW-ASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVR 259 FVL S +DLDHF+AA S W++H A L+ RP HC T + L W I N R S + L+A LSH +RD RRG+WFC G STSPIP+ +Y+ + + LP I++ Sbjct: 73 FVLASFIDLDHFIAARS-WHIHDATHLQKRPFLHCTT----IPILLWMLFISLAN-------------------------TFQSPLLERTSWIILAAFLSHHIRDGTRRGLWFCPFG-STSPIPYYLYVSLCMSLPYILQ 181 The following BLAST results are available for this feature:
BLAST of NO01G01250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01250 ID=NO01G01250|Name=NO01G01250|organism=Nannochloropsis oceanica|type=gene|length=957bpback to top protein sequence of NO01G01250.1 >NO01G01250.1-protein ID=NO01G01250.1-protein|Name=NO01G01250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=302bpback to top Synonyms
Publications
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