NO01G01250, NO01G01250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01250 vs. NCBI_GenBank
Match: EWM29075.1 (hypothetical protein Naga_100024g6 [Nannochloropsis gaditana]) HSP 1 Score: 194.9 bits (494), Expect = 3.600e-46 Identity = 124/264 (46.97%), Postives = 154/264 (58.33%), Query Frame = 0 Query: 11 AMCLRNLASAP-LVRREALLPAACLAGDLLLPRVLIPL-------STTTPPLLLCLGLDNATHAFLALLIWWAVLAPPLXXXXXXXXXXXXXXXXYHRS---LQTPRYQFGNERLELLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQY--GNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVRRAL 262 AM L +AP L+ REALL AC+AGD L P +L L + +PPL+L L LDN THA LA ++WW VLAPP XXXXXXXX L P + LE+L+AF+LGSALDLDHF+AA S W L G L L RPPGHCLTSL LTA W Y G G +H ++ R SLLF+SA LSHQLRDA+R G+WFCH+G ST+P+ F +Y+++ + LPL++RR L Sbjct: 8 AMALSMPGNAPSLLLREALLLTACVAGDTLFPSLLAYLYGSPSGTDSPSPPLILRLLLDNFTHATLASMVWWTVLAPPAPWPPAFSRXXXXXXXXXXXXXXLLPRPGHPAHKPCLEILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLL-----QNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIRRLL 266
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_009066670.1 (hypothetical protein LOTGIDRAFT_229868 [Lottia gigantea] >ESO82880.1 hypothetical protein LOTGIDRAFT_229868 [Lottia gigantea]) HSP 1 Score: 91.7 bits (226), Expect = 4.300e-15 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 0 Query: 110 GNERLELLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVR 259 G + + LL++FV+ ++DLDHFLAA SL+ + AL L +RPP H T + L A CW I Y LH S LLFLS+ SH +RD RRG+WF +G ST PIP+ +Y+++I++LPL +R Sbjct: 86 GLDVVSLLMSFVVAVSIDLDHFLAAKSLF-IQDALSLSERPPFHASTIVIILAATCWL-IGY---------ILHLHC------------------SKILGLLFLSSGFSHHIRDGWRRGLWFPPLG-STQPIPYNLYIVLILILPLFIR 204
BLAST of NO01G01250 vs. NCBI_GenBank
Match: PBC31221.1 (Transmembrane protein C5orf28 [Apis cerana cerana]) HSP 1 Score: 83.2 bits (204), Expect = 1.500e-12 Identity = 51/150 (34.00%), Postives = 74/150 (49.33%), Query Frame = 0 Query: 116 LLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVRRALRVGE 266 + + F L S +D+DHF+AAGS W L A L+ RP HC T L W + + + N+ + YS + L++ LSH +RD RRG+WFC IG ST PIP+ +YL M +MLP +++ + E Sbjct: 72 IFLCFSLSSFIDIDHFIAAGS-WKLSDATHLEKRPFFHCTT----LPVTLWLMLNFYSSVFNQPKFSY------------------------YSWIILASFLSHHIRDGTRRGLWFCPIG-STQPIPYYLYLSMSMMLPHVLQWLMEADE 191
BLAST of NO01G01250 vs. NCBI_GenBank
Match: OQR96872.1 (hypothetical protein ACHHYP_13162 [Achlya hypogyna]) HSP 1 Score: 82.4 bits (202), Expect = 2.600e-12 Identity = 59/203 (29.06%), Postives = 84/203 (41.38%), Query Frame = 0 Query: 60 LDNATHAFLALLIWWAVLAPPLXXXXXXXXXXXXXXXXYHRSLQTPRYQFGNERLELL---VAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVRR 260 +DNATHA +ALL W Y + +RL+LL +A ++GS LDLDHF+AA W A L +RP GH + + A+ + W + + +R L L LSHQLRDA RRG+W ST P+P+ +YL + + LP ++ R Sbjct: 90 VDNATHATVALLAWALACL----------------------------YAYPFQRLQLLEGVIALLIGSLLDLDHFVAAAG-WTFQAATSLSERPLGHAVAFIAAIALVVWCA-------------------------------CPRSRRIRAVALVLVCLLSHQLRDAFRRGLWIAPGVGSTPPLPYAMYLALELSLPWVLAR 232
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_016919610.1 (PREDICTED: transmembrane protein C5orf28 homolog [Apis cerana]) HSP 1 Score: 82.0 bits (201), Expect = 3.400e-12 Identity = 50/143 (34.97%), Postives = 72/143 (50.35%), Query Frame = 0 Query: 116 LLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVR 259 + + F L S +D+DHF+AAGS W L A L+ RP HC T L W + + + N+ + YS + L++ LSH +RD RRG+WFC IG ST PIP+ +YL M +MLP +++ Sbjct: 72 IFLCFSLSSFIDIDHFIAAGS-WKLSDATHLEKRPFFHCTT----LPVTLWLMLNFYSSVFNQPKFSY------------------------YSWIILASFLSHHIRDGTRRGLWFCPIG-STQPIPYYLYLSMSMMLPHVLQ 184
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_008866583.1 (hypothetical protein H310_04153 [Aphanomyces invadans] >ETW05145.1 hypothetical protein H310_04153 [Aphanomyces invadans]) HSP 1 Score: 80.5 bits (197), Expect = 9.900e-12 Identity = 49/148 (33.11%), Postives = 74/148 (50.00%), Query Frame = 0 Query: 115 ELLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVRRALR 263 E + A +GS LD DHF+AA + ++L A L DRP GH +T + A+ + W ++ ++R + L LSHQLRD+ RRG+WF +G ST P+P+ +YL++ V++PL V LR Sbjct: 17 EAIAAVAVGSLLDADHFVAARA-FSLRAATSLNDRPWGHSVTFIIAVALIAWKAL-------------------------------PAPFNLRGAALLFVCLLSHQLRDSFRRGLWFAPLG-STPPLPYWVYLVLEVLVPLGVGTWLR 131
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_006571427.1 (PREDICTED: transmembrane protein C5orf28 [Apis mellifera]) HSP 1 Score: 79.3 bits (194), Expect = 2.200e-11 Identity = 49/143 (34.27%), Postives = 71/143 (49.65%), Query Frame = 0 Query: 116 LLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVR 259 + + F L S +D+DHF+AAGS W L A L+ RP HC T L W + + + N + YS + L++ LSH +RD RRG+WFC IG ST PIP+ +YL M ++LP +++ Sbjct: 72 IFLCFSLSSFIDIDHFIAAGS-WKLSDATHLEKRPFFHCTTIPITL----WLMLNFYSSVFNHPKFSY------------------------YSWIILASFLSHHIRDGTRRGLWFCPIG-STQPIPYYLYLSMSMILPHVLQ 184
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_012339477.1 (PREDICTED: transmembrane protein C5orf28 homolog [Apis florea]) HSP 1 Score: 79.3 bits (194), Expect = 2.200e-11 Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = 0 Query: 116 LLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVR 259 + + F L S +D+DHF+AA S W L A L+ RP HC T L W + + + N + YS + L++ LSH +RD RRG+WFC IG ST PIP+ +YL M +MLP +++ Sbjct: 73 IFLCFSLSSFIDIDHFIAANS-WKLSDATHLEKRPFFHCTT----LPITLWLMLNFYSNVFNHPKFSY------------------------YSWIILASFLSHHIRDGTRRGLWFCPIG-STQPIPYYLYLTMSMMLPHVLQ 185
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_006622850.1 (PREDICTED: transmembrane protein C5orf28 homolog [Apis dorsata]) HSP 1 Score: 79.0 bits (193), Expect = 2.900e-11 Identity = 49/143 (34.27%), Postives = 71/143 (49.65%), Query Frame = 0 Query: 116 LLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVR 259 + + F L S +D+DHF+AAGS W L A L+ RP HC T L W + + + N + YS + L++ LSH +RD RRG+WFC IG ST PIP+ +YL M ++LP +++ Sbjct: 73 IFLCFSLSSFIDIDHFIAAGS-WKLSDATHLEKRPFFHCTT----LPITLWLMLNFYSSVFNYPKFSY------------------------YSWIILASFLSHHIRDGTRRGLWFCPIG-STQPIPYYLYLSMSMILPHVLQ 185
BLAST of NO01G01250 vs. NCBI_GenBank
Match: XP_014782630.1 (PREDICTED: transmembrane protein C5orf28 homolog [Octopus bimaculoides] >KOF74113.1 hypothetical protein OCBIM_22036746mg [Octopus bimaculoides]) HSP 1 Score: 79.0 bits (193), Expect = 2.900e-11 Identity = 74/245 (30.20%), Postives = 110/245 (44.90%), Query Frame = 0 Query: 16 NLASAPLVRREALLPAACLAGDLLLPRVLIPLSTTTPPLLLCLGLDNATHAFLALLIWWAVLAPPLXXXXXXXXXXXXXXXXY--HRSLQTPRYQFGNERLELLVAFVLGSALDLDHFLAAGSLWNLHGALRLKDRPPGHCLTSLFALTALCWASIQYGNGSGNRRDRLHXXXXXXXXXXXXXXXXXXKEDSVRYSLLFLSATLSHQLRDAIRRGIWFCHIGVSTSPIPFGIYLIMIVMLPLIVR 259 +L S L+ LL CL GD LPR+ L L + +DN TH + L W VL L + RSL + + L L+ VL ++D+DHFLAA S ++L AL L RPP HC T + + A +S+ +R+ ++SLLFL+A LSH +RDA R G+W G +T P+P+ +Y++ ++LP+ V+ Sbjct: 4 HLWSPMLIVYSVLLVLTCLIGD-HLPRMNHVGPYINRHLFLRVAIDNFTHGIIGFLSWAIVLDLDLVNTDTNAPVMFLPSSGFVPTRSLMDVQQ---SSLLACLLCMVLAMSVDVDHFLAARS-FSLQDALSLPSRPPFHCTTLIPVVVA---SSLLMTYAFHSRQFC----------------------RCFKFSLLFLTAFLSHHIRDARRHGLWLWPFG-ATPPLPYMVYILCTLLLPVAVK 217 The following BLAST results are available for this feature:
BLAST of NO01G01250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01250 ID=NO01G01250|Name=NO01G01250|organism=Nannochloropsis oceanica|type=gene|length=957bpback to top protein sequence of NO01G01250.1 >NO01G01250.1-protein ID=NO01G01250.1-protein|Name=NO01G01250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=302bpback to top Synonyms
Publications
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