NO01G01220, NO01G01220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_043408810.1 (phytanoyl-CoA dioxygenase family protein [Archangium violaceum] >KFA88417.1 phytanoyl-CoA dioxygenase [Archangium violaceum Cb vi76]) HSP 1 Score: 281.6 bits (719), Expect = 3.000e-72 Identity = 145/275 (52.73%), Postives = 186/275 (67.64%), Query Frame = 0 Query: 34 DYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309 D R F +GYLVL G+ A C AL+ R L+ F S+F+T++Q+RTSD+YFL SGD IRFF+E +AF + G+ RQ + SINK+GHALHDLDP+F++ + TP++ LA + GL PL+ QSMYIFKQP IGG+V HQD TFLYTEP + +GFW+ALED T+ NGCLWA+PG H G+ +RF R GGT F EG +PLEV+ G+LV+LH L H S N S+ SRHA+SVH+++G YPEDNWL R P MP Sbjct: 2 DRARDFARQGYLVLPGFVPAAACDALKARAEQLVAGFQ-PETVSIFTTNDQTRTSDEYFLSSGDSIRFFFEENAF-RPDGSLRQDKTLSINKIGHALHDLDPLFERFSRTPELAGLASEL-GLKQPLLLQSMYIFKQPHIGGEVNCHQDSTFLYTEPSTCLGFWFALEDATLENGCLWALPGGHTLGLKKRF-VRVPGGGTAFQVLDPTPLPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSSKSRHAYSVHLIDG--TARYPEDNWLHRVPTMP 270
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_095990870.1 (phytanoyl-CoA dioxygenase family protein [Cystobacter fuscus] >ATB43456.1 Phytanoyl-CoA dioxygenase domain containing 1 [Cystobacter fuscus]) HSP 1 Score: 280.8 bits (717), Expect = 5.200e-72 Identity = 143/274 (52.19%), Postives = 188/274 (68.61%), Query Frame = 0 Query: 37 RRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMPFQ 311 R F +G+LVL G+ C AL+ R AL+ +F S+F+T EQSRTSD+YFL SGD+IRFF+E +AF + G+ RQ + SINK+GHA+HDLDP+F++ + TP++ LA + GL L+ QSMYIFKQP IGG+V +HQD TFLYTEP + +GFW+ALED T+ NGCLWA+PG H G+ +RF R E GGT F EG +PLEV+ G+LV+LH L H S N S SRHA+S+H+++G YPEDNWL RAP +P + Sbjct: 5 RDFARQGFLVLPGFVPAHACEALKARAEALVADFQ-PETVSIFTTHEQSRTSDEYFLSSGDQIRFFFEENAF-RPDGSLRQDKTLSINKIGHAMHDLDPVFERFSRTPELATLASEL-GLKQALLLQSMYIFKQPFIGGEVNSHQDSTFLYTEPTTCLGFWFALEDATLENGCLWALPGGHALGLKKRF-VRAEGGGTAFQVLDPTPLPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSPRSRHAYSLHLIDG--TARYPEDNWLHRAPTLPLR 272
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_071896691.1 (phytanoyl-CoA dioxygenase family protein [Cystobacter ferrugineus] >OJH42596.1 phytanoyl-CoA dioxygenase [Cystobacter ferrugineus]) HSP 1 Score: 280.4 bits (716), Expect = 6.800e-72 Identity = 144/274 (52.55%), Postives = 187/274 (68.25%), Query Frame = 0 Query: 37 RRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMPFQ 311 R FE +G+LVL G+ C AL+ R L+ F S+F+T EQSRTSD+YFL SGDKIRFF+E +AF + G+ RQ + SINK+GHA+HDLDP+F++ + TP++ LA + GL L+ QSMYIFKQP IGG+V +HQD TFLYTEP + +GFW+ALED T+ NGCLWA+PG H G+ +RF R E GGT F EG +PLEV+ G+LV+LH L H S N S SRHA+S+H+++G YPEDNWL RAP +P + Sbjct: 5 RDFERQGFLVLPGFVPARACDALKARAEGLVAGFQ-PETVSIFTTHEQSRTSDEYFLSSGDKIRFFFEENAF-RPDGSLRQDKTLSINKIGHAMHDLDPVFERFSRTPELAALASEL-GLKQALLLQSMYIFKQPFIGGEVNSHQDSTFLYTEPLTCLGFWFALEDATLENGCLWALPGGHALGLKKRF-VRAEGGGTTFQVLDPTPPPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSPKSRHAYSLHLIDG--TARYPEDNWLHRAPTLPLR 272
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_093519407.1 (phytanoyl-CoA dioxygenase family protein [Stigmatella erecta] >SET85586.1 phytanoyl-CoA hydroxylase [Stigmatella erecta]) HSP 1 Score: 280.0 bits (715), Expect = 8.900e-72 Identity = 143/270 (52.96%), Postives = 187/270 (69.26%), Query Frame = 0 Query: 39 FETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309 FE +G+L+L + + A C AL+ R L++ F RS+FST EQ RTSD YFL SGD+I FF+E DAF + G+ RQ +A SINK+GHALHDLDP+F + + TP++ LA + GL PL+ QSMYIFKQP IGG+V +HQD FLYTEP + +GFW+ALED T+ NGCLWA PG H+ G+ +RF R EGGT F EG +PLEV+ G+LV+LH L H S N S SRHA+S+H+++G +YPEDNWL+R+P +P Sbjct: 7 FEHQGFLILPRFVTAAACDALKHRAETLVKGFQ-PVTRSIFSTSEQRRTSDAYFLSSGDQIHFFFEEDAFLPD-GSLRQAQALSINKIGHALHDLDPLFDRFSRTPELAGLAAEL-GLQQPLLLQSMYIFKQPHIGGEVTSHQDAAFLYTEPSTCLGFWFALEDATLENGCLWAQPGGHRQGLKKRF-VRAPEGGTVFRTLDPTPLSEEGMVPLEVEQGTLVVLHGLLPHRSGANTSPHSRHAYSLHLIDG--TATYPEDNWLRRSPALP 270
BLAST of NO01G01220 vs. NCBI_GenBank
Match: APR81959.1 (Phytanoyl-CoA dioxygenase domain containing 1 [Minicystis rosea]) HSP 1 Score: 278.1 bits (710), Expect = 3.400e-71 Identity = 147/286 (51.40%), Postives = 186/286 (65.03%), Query Frame = 0 Query: 29 PEVWEDYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVF-STDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEG-GTEFVPAAAGGWDL----EGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309 P + E+ R R++ +G+LVLEG+ S C AL R L+ FD S+F S D QSRT+D YFLGSGD +RFF+EA AFD E G RQ +A SINK+GHALHDLD F + TP + +AR V G+ P + QSMYIFKQP IGG+V HQD T+LYT+P SVVGFW+ALED T+ NG +WA+PG H+ G+ RFRR G + T+ + +A W G +PLE K G+LV+LH L H S N S SRHA+++H +E YPEDNWLQR MP Sbjct: 9 PRITEEQRTRYDRDGFLVLEGFASPEACDALMARARELVAAFDPPDVASIFVSGDAQSRTTDAYFLGSGDTVRFFFEAGAFD-ERGQLRQDKALSINKIGHALHDLDATFASFSRTPALAAVARDV-GMRAPRLMQSMYIFKQPHIGGEVVCHQDATYLYTDPISVVGFWFALEDATIENGAMWALPGGHRAGLKARFRRAGNDRVRTDVIDDSA--WPAFAKENGYVPLEAKKGTLVVLHGLLPHLSGANTSDRSRHAYALHAIEA--SAHYPEDNWLQRDASMP 288
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_089287645.1 (MULTISPECIES: phytanoyl-CoA dioxygenase family protein [Azospirillum] >SNS29648.1 phytanoyl-CoA hydroxylase [Azospirillum sp. RU38E] >SNS48077.1 phytanoyl-CoA hydroxylase [Azospirillum sp. RU37A]) HSP 1 Score: 276.9 bits (707), Expect = 7.500e-71 Identity = 138/274 (50.36%), Postives = 181/274 (66.06%), Query Frame = 0 Query: 39 FETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWD----LEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309 + +G+L+LEG+ A C AL + L+ FD AAH SVFST Q +TSDDYFL SGD+IRFF+E +AFD G RQ ++ SINK+GHALHD DP+F Q + P++ + + G++ PL+ QSMYIFKQP IGG+V HQD TFLYTEP SVVG W+A++D T+ NGC+WA+PG H+ G+ +RF R G +GG A W G +PL K G+L+LLH L H S N S SRHA+++HVV+G YP NWLQR+ + P Sbjct: 12 YHRDGFLLLEGFADPADCRALMDQAGRLVAGFDAAAHASVFSTVNQQKTSDDYFLSSGDQIRFFFEEEAFD-AAGHLRQEKSLSINKIGHALHDRDPVFSQFSRDPRLASITADI-GMARPLLMQSMYIFKQPHIGGEVVCHQDSTFLYTEPMSVVGLWFAVQDATLENGCMWALPGGHRDGLKKRFSRDG-QGGVRMDVLDASPWPDCTADNGYVPLPAKQGTLILLHGLLPHLSGPNRSPHSRHAYTIHVVDG--ACDYPASNWLQRSADDP 280
BLAST of NO01G01220 vs. NCBI_GenBank
Match: XP_001695791.1 (predicted protein [Chlamydomonas reinhardtii] >PNW72371.1 hypothetical protein CHLRE_16g673281v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 276.2 bits (705), Expect = 1.300e-70 Identity = 143/275 (52.00%), Postives = 182/275 (66.18%), Query Frame = 0 Query: 38 RFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMPFQML 313 +F +G+LVLE + S CAAL+ RM+ L+Q+FD S+FST Q+ T+D+YFL S I FF+E AFD E G RQ + SINKVGHALHDLDP+F+Q + + + + R++ G + PL QSMYIFKQP IGG+V HQD +F++T P S VG WWALEDCT NGCLWA+PG HK G+ RRF GG A +DL +PLE AG+LVLL VHYS EN S SRH++S+H+VE G ++ DNW QRAPE P+Q L Sbjct: 25 KFHRDGFLVLEKFASPEECAALQKRMDQLLQDFD-PQTVSIFSTKNQAATTDNYFLRSASDIGFFFEDKAFD-EAGQLRQAKELSINKVGHALHDLDPVFRQFSRSAAVCNVMRSL-GYARPLPVQSMYIFKQPSIGGEVVPHQDSSFIHTSPLSCVGLWWALEDCTKDNGCLWAMPGIHKDGLKRRFTL--GPGGKVSFDAPQPAYDLSQFVPLECPAGTLVLLQGENVHYSAENTSPVSRHSYSMHLVESAPGVTWSADNWAQRAPENPWQPL 294
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_053231552.1 (phytanoyl-CoA dioxygenase family protein [Sandaracinus amylolyticus] >AKF04184.1 Phytanoyl-CoA dioxygenase domain containing 1 [Sandaracinus amylolyticus]) HSP 1 Score: 276.2 bits (705), Expect = 1.300e-70 Identity = 141/270 (52.22%), Postives = 182/270 (67.41%), Query Frame = 0 Query: 34 DYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQR 304 D R R+ +G+LVLEG+ A C ALR + L+ FD AHRSVF+T+EQ+R SDD+FL S +IRFF+E DAFD ETGA RQP+ SINK+GHALHDLDP + P+I L + GL+ PL+ QSMYIFKQP IGG+V HQD TFL+TEP++++G W+ALED NGCLWA+PG H+ G+ RF R G T F WD +PLEV+ G++++L + H S N S ASRHA+++HVV G ++YP NWLQR Sbjct: 7 DARERYHRDGFLVLEGFVDPARCDALRAHADRLVAAFDPDAHRSVFTTNEQTRHSDDHFLDSAGEIRFFFEEDAFD-ETGALRQPKERSINKIGHALHDLDPEIDAFSRDPKIETLVAEL-GLAAPLLMQSMYIFKQPFIGGEVRCHQDSTFLHTEPEAMLGLWFALEDAHRGNGCLWAIPGGHRAGLKSRFVREGR--STRFEVYDETPWDESRLVPLEVEKGAVIVLDGLVPHMSHANRSPASRHAYTLHVVSG--ESAYPSTNWLQR 270
BLAST of NO01G01220 vs. NCBI_GenBank
Match: XP_008339545.1 (PREDICTED: phytanoyl-CoA dioxygenase [Malus domestica]) HSP 1 Score: 275.8 bits (704), Expect = 1.700e-70 Identity = 139/273 (50.92%), Postives = 190/273 (69.60%), Query Frame = 0 Query: 34 DYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPE 307 D + F ++GYLV+E + S A+R RM+ L+Q+FD ++ S+FST EQ T+D+YF S D I FF+E AF + G +QP+ SINKVGHALH+LDP+F++ TY+ +I L ++ G P+V QSMYIFKQP IGG+V HQD +FLYT+P + G W ALED T+TNGCLWA+PGS K G+ RRF RGEEG T P+ +D + +P+EVKAGSLV++H L+H S EN S+ SRHA+S+HVV+ +G + +DNW++R E Sbjct: 10 DQLQTFRSQGYLVMESFASAEDIEAMRSRMDQLLQDFDCSSTASIFSTQEQQHTTDNYFYDSVDNISFFFEEKAFGSD-GELQQPKELSINKVGHALHELDPVFKRFTYSEKISGLFSSL-GYKRPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTDPPTCTGLWLALEDATITNGCLWAIPGSQKNGLVRRF-IRGEEGVTFDRPSPV--YDQKDFIPIEVKAGSLVVIHGDLIHQSFENQSSKSRHAYSLHVVD-TDGCKWSQDNWIRRKVE 276
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_035708429.1 (phytanoyl-CoA dioxygenase family protein [Niveispirillum irakense]) HSP 1 Score: 274.6 bits (701), Expect = 3.700e-70 Identity = 135/274 (49.27%), Postives = 179/274 (65.33%), Query Frame = 0 Query: 34 DYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGW----DLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQR 304 + + + +G+L+LE + S C L + L++ FD AH SVFST Q +TSDDYFL SGD IRFF+E +AFD ETG Q +A SINK+GHA+HD DP+F Q + P++ + + G++ PL+ QSMYIFKQP IGG+V HQD TFLYT+P SVVG W+A++D T+ NGC+WA+PG H+ G+ +RF R G +GG A W G +PLE K G+L+LLH L H S N S SRHA+++HVV+G YP NWLQR Sbjct: 8 EQKAAYHRDGFLLLENFASAPDCEGLMEQAGRLVEGFDADAHASVFSTTNQQKTSDDYFLSSGDHIRFFFEEEAFD-ETGRLHQEKALSINKIGHAMHDRDPVFSQFSRDPRLASITADI-GMAQPLLMQSMYIFKQPHIGGEVVCHQDSTFLYTDPMSVVGLWFAVQDATLDNGCMWALPGGHRDGLKKRFSRDG-QGGVRMDVLDASPWPDCTPENGYVPLEAKQGTLILLHGLLPHLSGPNRSPRSRHAYTIHVVDG--ACDYPASNWLQR 276 The following BLAST results are available for this feature:
BLAST of NO01G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01220 ID=NO01G01220|Name=NO01G01220|organism=Nannochloropsis oceanica|type=gene|length=942bpback to top protein sequence of NO01G01220.1 >NO01G01220.1-protein ID=NO01G01220.1-protein|Name=NO01G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bpback to top Synonyms
Publications
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