NO01G01220, NO01G01220 (gene) Nannochloropsis oceanica

Overview
NameNO01G01220
Unique NameNO01G01220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length942
Alignment locationchr1:316834..317775 +

Link to JBrowse

Properties
Property NameValue
DescriptionPhytanoyl-dioxygenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:316834..317775 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_043408810.1 (phytanoyl-CoA dioxygenase family protein [Archangium violaceum] >KFA88417.1 phytanoyl-CoA dioxygenase [Archangium violaceum Cb vi76])

HSP 1 Score: 281.6 bits (719), Expect = 3.000e-72
Identity = 145/275 (52.73%), Postives = 186/275 (67.64%), Query Frame = 0
Query:   34 DYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309
            D  R F  +GYLVL G+   A C AL+ R   L+  F      S+F+T++Q+RTSD+YFL SGD IRFF+E +AF +  G+ RQ +  SINK+GHALHDLDP+F++ + TP++  LA  + GL  PL+ QSMYIFKQP IGG+V  HQD TFLYTEP + +GFW+ALED T+ NGCLWA+PG H  G+ +RF  R   GGT F          EG +PLEV+ G+LV+LH  L H S  N S+ SRHA+SVH+++G     YPEDNWL R P MP
Sbjct:    2 DRARDFARQGYLVLPGFVPAAACDALKARAEQLVAGFQ-PETVSIFTTNDQTRTSDEYFLSSGDSIRFFFEENAF-RPDGSLRQDKTLSINKIGHALHDLDPLFERFSRTPELAGLASEL-GLKQPLLLQSMYIFKQPHIGGEVNCHQDSTFLYTEPSTCLGFWFALEDATLENGCLWALPGGHTLGLKKRF-VRVPGGGTAFQVLDPTPLPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSSKSRHAYSVHLIDG--TARYPEDNWLHRVPTMP 270          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_095990870.1 (phytanoyl-CoA dioxygenase family protein [Cystobacter fuscus] >ATB43456.1 Phytanoyl-CoA dioxygenase domain containing 1 [Cystobacter fuscus])

HSP 1 Score: 280.8 bits (717), Expect = 5.200e-72
Identity = 143/274 (52.19%), Postives = 188/274 (68.61%), Query Frame = 0
Query:   37 RRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMPFQ 311
            R F  +G+LVL G+     C AL+ R  AL+ +F      S+F+T EQSRTSD+YFL SGD+IRFF+E +AF +  G+ RQ +  SINK+GHA+HDLDP+F++ + TP++  LA  + GL   L+ QSMYIFKQP IGG+V +HQD TFLYTEP + +GFW+ALED T+ NGCLWA+PG H  G+ +RF  R E GGT F          EG +PLEV+ G+LV+LH  L H S  N S  SRHA+S+H+++G     YPEDNWL RAP +P +
Sbjct:    5 RDFARQGFLVLPGFVPAHACEALKARAEALVADFQ-PETVSIFTTHEQSRTSDEYFLSSGDQIRFFFEENAF-RPDGSLRQDKTLSINKIGHAMHDLDPVFERFSRTPELATLASEL-GLKQALLLQSMYIFKQPFIGGEVNSHQDSTFLYTEPTTCLGFWFALEDATLENGCLWALPGGHALGLKKRF-VRAEGGGTAFQVLDPTPLPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSPRSRHAYSLHLIDG--TARYPEDNWLHRAPTLPLR 272          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_071896691.1 (phytanoyl-CoA dioxygenase family protein [Cystobacter ferrugineus] >OJH42596.1 phytanoyl-CoA dioxygenase [Cystobacter ferrugineus])

HSP 1 Score: 280.4 bits (716), Expect = 6.800e-72
Identity = 144/274 (52.55%), Postives = 187/274 (68.25%), Query Frame = 0
Query:   37 RRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMPFQ 311
            R FE +G+LVL G+     C AL+ R   L+  F      S+F+T EQSRTSD+YFL SGDKIRFF+E +AF +  G+ RQ +  SINK+GHA+HDLDP+F++ + TP++  LA  + GL   L+ QSMYIFKQP IGG+V +HQD TFLYTEP + +GFW+ALED T+ NGCLWA+PG H  G+ +RF  R E GGT F          EG +PLEV+ G+LV+LH  L H S  N S  SRHA+S+H+++G     YPEDNWL RAP +P +
Sbjct:    5 RDFERQGFLVLPGFVPARACDALKARAEGLVAGFQ-PETVSIFTTHEQSRTSDEYFLSSGDKIRFFFEENAF-RPDGSLRQDKTLSINKIGHAMHDLDPVFERFSRTPELAALASEL-GLKQALLLQSMYIFKQPFIGGEVNSHQDSTFLYTEPLTCLGFWFALEDATLENGCLWALPGGHALGLKKRF-VRAEGGGTTFQVLDPTPPPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSPKSRHAYSLHLIDG--TARYPEDNWLHRAPTLPLR 272          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_093519407.1 (phytanoyl-CoA dioxygenase family protein [Stigmatella erecta] >SET85586.1 phytanoyl-CoA hydroxylase [Stigmatella erecta])

HSP 1 Score: 280.0 bits (715), Expect = 8.900e-72
Identity = 143/270 (52.96%), Postives = 187/270 (69.26%), Query Frame = 0
Query:   39 FETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309
            FE +G+L+L  + + A C AL+ R   L++ F     RS+FST EQ RTSD YFL SGD+I FF+E DAF  + G+ RQ +A SINK+GHALHDLDP+F + + TP++  LA  + GL  PL+ QSMYIFKQP IGG+V +HQD  FLYTEP + +GFW+ALED T+ NGCLWA PG H+ G+ +RF  R  EGGT F          EG +PLEV+ G+LV+LH  L H S  N S  SRHA+S+H+++G    +YPEDNWL+R+P +P
Sbjct:    7 FEHQGFLILPRFVTAAACDALKHRAETLVKGFQ-PVTRSIFSTSEQRRTSDAYFLSSGDQIHFFFEEDAFLPD-GSLRQAQALSINKIGHALHDLDPLFDRFSRTPELAGLAAEL-GLQQPLLLQSMYIFKQPHIGGEVTSHQDAAFLYTEPSTCLGFWFALEDATLENGCLWAQPGGHRQGLKKRF-VRAPEGGTVFRTLDPTPLSEEGMVPLEVEQGTLVVLHGLLPHRSGANTSPHSRHAYSLHLIDG--TATYPEDNWLRRSPALP 270          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: APR81959.1 (Phytanoyl-CoA dioxygenase domain containing 1 [Minicystis rosea])

HSP 1 Score: 278.1 bits (710), Expect = 3.400e-71
Identity = 147/286 (51.40%), Postives = 186/286 (65.03%), Query Frame = 0
Query:   29 PEVWEDYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVF-STDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEG-GTEFVPAAAGGWDL----EGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309
            P + E+ R R++ +G+LVLEG+ S   C AL  R   L+  FD     S+F S D QSRT+D YFLGSGD +RFF+EA AFD E G  RQ +A SINK+GHALHDLD  F   + TP +  +AR V G+  P + QSMYIFKQP IGG+V  HQD T+LYT+P SVVGFW+ALED T+ NG +WA+PG H+ G+  RFRR G +   T+ +  +A  W       G +PLE K G+LV+LH  L H S  N S  SRHA+++H +E      YPEDNWLQR   MP
Sbjct:    9 PRITEEQRTRYDRDGFLVLEGFASPEACDALMARARELVAAFDPPDVASIFVSGDAQSRTTDAYFLGSGDTVRFFFEAGAFD-ERGQLRQDKALSINKIGHALHDLDATFASFSRTPALAAVARDV-GMRAPRLMQSMYIFKQPHIGGEVVCHQDATYLYTDPISVVGFWFALEDATIENGAMWALPGGHRAGLKARFRRAGNDRVRTDVIDDSA--WPAFAKENGYVPLEAKKGTLVVLHGLLPHLSGANTSDRSRHAYALHAIEA--SAHYPEDNWLQRDASMP 288          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_089287645.1 (MULTISPECIES: phytanoyl-CoA dioxygenase family protein [Azospirillum] >SNS29648.1 phytanoyl-CoA hydroxylase [Azospirillum sp. RU38E] >SNS48077.1 phytanoyl-CoA hydroxylase [Azospirillum sp. RU37A])

HSP 1 Score: 276.9 bits (707), Expect = 7.500e-71
Identity = 138/274 (50.36%), Postives = 181/274 (66.06%), Query Frame = 0
Query:   39 FETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWD----LEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309
            +  +G+L+LEG+   A C AL  +   L+  FD AAH SVFST  Q +TSDDYFL SGD+IRFF+E +AFD   G  RQ ++ SINK+GHALHD DP+F Q +  P++  +   + G++ PL+ QSMYIFKQP IGG+V  HQD TFLYTEP SVVG W+A++D T+ NGC+WA+PG H+ G+ +RF R G +GG       A  W       G +PL  K G+L+LLH  L H S  N S  SRHA+++HVV+G     YP  NWLQR+ + P
Sbjct:   12 YHRDGFLLLEGFADPADCRALMDQAGRLVAGFDAAAHASVFSTVNQQKTSDDYFLSSGDQIRFFFEEEAFD-AAGHLRQEKSLSINKIGHALHDRDPVFSQFSRDPRLASITADI-GMARPLLMQSMYIFKQPHIGGEVVCHQDSTFLYTEPMSVVGLWFAVQDATLENGCMWALPGGHRDGLKKRFSRDG-QGGVRMDVLDASPWPDCTADNGYVPLPAKQGTLILLHGLLPHLSGPNRSPHSRHAYTIHVVDG--ACDYPASNWLQRSADDP 280          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: XP_001695791.1 (predicted protein [Chlamydomonas reinhardtii] >PNW72371.1 hypothetical protein CHLRE_16g673281v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 276.2 bits (705), Expect = 1.300e-70
Identity = 143/275 (52.00%), Postives = 182/275 (66.18%), Query Frame = 0
Query:   38 RFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMPFQML 313
            +F  +G+LVLE + S   CAAL+ RM+ L+Q+FD     S+FST  Q+ T+D+YFL S   I FF+E  AFD E G  RQ +  SINKVGHALHDLDP+F+Q + +  +  + R++ G + PL  QSMYIFKQP IGG+V  HQD +F++T P S VG WWALEDCT  NGCLWA+PG HK G+ RRF      GG     A    +DL   +PLE  AG+LVLL    VHYS EN S  SRH++S+H+VE   G ++  DNW QRAPE P+Q L
Sbjct:   25 KFHRDGFLVLEKFASPEECAALQKRMDQLLQDFD-PQTVSIFSTKNQAATTDNYFLRSASDIGFFFEDKAFD-EAGQLRQAKELSINKVGHALHDLDPVFRQFSRSAAVCNVMRSL-GYARPLPVQSMYIFKQPSIGGEVVPHQDSSFIHTSPLSCVGLWWALEDCTKDNGCLWAMPGIHKDGLKRRFTL--GPGGKVSFDAPQPAYDLSQFVPLECPAGTLVLLQGENVHYSAENTSPVSRHSYSMHLVESAPGVTWSADNWAQRAPENPWQPL 294          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_053231552.1 (phytanoyl-CoA dioxygenase family protein [Sandaracinus amylolyticus] >AKF04184.1 Phytanoyl-CoA dioxygenase domain containing 1 [Sandaracinus amylolyticus])

HSP 1 Score: 276.2 bits (705), Expect = 1.300e-70
Identity = 141/270 (52.22%), Postives = 182/270 (67.41%), Query Frame = 0
Query:   34 DYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQR 304
            D R R+  +G+LVLEG+   A C ALR   + L+  FD  AHRSVF+T+EQ+R SDD+FL S  +IRFF+E DAFD ETGA RQP+  SINK+GHALHDLDP     +  P+I  L   + GL+ PL+ QSMYIFKQP IGG+V  HQD TFL+TEP++++G W+ALED    NGCLWA+PG H+ G+  RF R G    T F       WD    +PLEV+ G++++L   + H S  N S ASRHA+++HVV G   ++YP  NWLQR
Sbjct:    7 DARERYHRDGFLVLEGFVDPARCDALRAHADRLVAAFDPDAHRSVFTTNEQTRHSDDHFLDSAGEIRFFFEEDAFD-ETGALRQPKERSINKIGHALHDLDPEIDAFSRDPKIETLVAEL-GLAAPLLMQSMYIFKQPFIGGEVRCHQDSTFLHTEPEAMLGLWFALEDAHRGNGCLWAIPGGHRAGLKSRFVREGR--STRFEVYDETPWDESRLVPLEVEKGAVIVLDGLVPHMSHANRSPASRHAYTLHVVSG--ESAYPSTNWLQR 270          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: XP_008339545.1 (PREDICTED: phytanoyl-CoA dioxygenase [Malus domestica])

HSP 1 Score: 275.8 bits (704), Expect = 1.700e-70
Identity = 139/273 (50.92%), Postives = 190/273 (69.60%), Query Frame = 0
Query:   34 DYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPE 307
            D  + F ++GYLV+E + S     A+R RM+ L+Q+FD ++  S+FST EQ  T+D+YF  S D I FF+E  AF  + G  +QP+  SINKVGHALH+LDP+F++ TY+ +I  L  ++ G   P+V QSMYIFKQP IGG+V  HQD +FLYT+P +  G W ALED T+TNGCLWA+PGS K G+ RRF  RGEEG T   P+    +D +  +P+EVKAGSLV++H  L+H S EN S+ SRHA+S+HVV+  +G  + +DNW++R  E
Sbjct:   10 DQLQTFRSQGYLVMESFASAEDIEAMRSRMDQLLQDFDCSSTASIFSTQEQQHTTDNYFYDSVDNISFFFEEKAFGSD-GELQQPKELSINKVGHALHELDPVFKRFTYSEKISGLFSSL-GYKRPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTDPPTCTGLWLALEDATITNGCLWAIPGSQKNGLVRRF-IRGEEGVTFDRPSPV--YDQKDFIPIEVKAGSLVVIHGDLIHQSFENQSSKSRHAYSLHVVD-TDGCKWSQDNWIRRKVE 276          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_035708429.1 (phytanoyl-CoA dioxygenase family protein [Niveispirillum irakense])

HSP 1 Score: 274.6 bits (701), Expect = 3.700e-70
Identity = 135/274 (49.27%), Postives = 179/274 (65.33%), Query Frame = 0
Query:   34 DYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGW----DLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQR 304
            + +  +  +G+L+LE + S   C  L  +   L++ FD  AH SVFST  Q +TSDDYFL SGD IRFF+E +AFD ETG   Q +A SINK+GHA+HD DP+F Q +  P++  +   + G++ PL+ QSMYIFKQP IGG+V  HQD TFLYT+P SVVG W+A++D T+ NGC+WA+PG H+ G+ +RF R G +GG       A  W       G +PLE K G+L+LLH  L H S  N S  SRHA+++HVV+G     YP  NWLQR
Sbjct:    8 EQKAAYHRDGFLLLENFASAPDCEGLMEQAGRLVEGFDADAHASVFSTTNQQKTSDDYFLSSGDHIRFFFEEEAFD-ETGRLHQEKALSINKIGHAMHDRDPVFSQFSRDPRLASITADI-GMAQPLLMQSMYIFKQPHIGGEVVCHQDSTFLYTDPMSVVGLWFAVQDATLDNGCMWALPGGHRDGLKKRFSRDG-QGGVRMDVLDASPWPDCTPENGYVPLEAKQGTLILLHGLLPHLSGPNRSPRSRHAYTIHVVDG--ACDYPASNWLQR 276          
The following BLAST results are available for this feature:
BLAST of NO01G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_043408810.13.000e-7252.73phytanoyl-CoA dioxygenase family protein [Archangi... [more]
WP_095990870.15.200e-7252.19phytanoyl-CoA dioxygenase family protein [Cystobac... [more]
WP_071896691.16.800e-7252.55phytanoyl-CoA dioxygenase family protein [Cystobac... [more]
WP_093519407.18.900e-7252.96phytanoyl-CoA dioxygenase family protein [Stigmate... [more]
APR81959.13.400e-7151.40Phytanoyl-CoA dioxygenase domain containing 1 [Min... [more]
WP_089287645.17.500e-7150.36MULTISPECIES: phytanoyl-CoA dioxygenase family pro... [more]
XP_001695791.11.300e-7052.00predicted protein [Chlamydomonas reinhardtii] >PNW... [more]
WP_053231552.11.300e-7052.22phytanoyl-CoA dioxygenase family protein [Sandarac... [more]
XP_008339545.11.700e-7050.92PREDICTED: phytanoyl-CoA dioxygenase [Malus domest... [more]
WP_035708429.13.700e-7049.27phytanoyl-CoA dioxygenase family protein [Niveispi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008241NSK008241Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01220.1NO01G01220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|627624gene_98Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100024g3gene1566Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01220.1NO01G01220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01220 ID=NO01G01220|Name=NO01G01220|organism=Nannochloropsis oceanica|type=gene|length=942bp
ATGACGACCACCAGCACTACCGCCATCGCACCACCAACACTTGCACTCGA
CAATGGCAACAAGGAGCTCCAACTCACGGATGACCCCGAGGTGTGGGAGG
ACTATCGCAGGCGCTTCGAGACGGAGGGATACCTCGTCTTGGAAGGATAC
TGGTCCCGGGCAACGTGCGCAGCACTCCGTGGCCGAATGAACGCCTTGAT
TCAAGAGTTTGACCTGGCCGCACACCGCTCCGTCTTCTCCACGGACGAGC
AAAGCCGCACTTCCGACGATTACTTCCTCGGGAGTGGCGACAAGATTCGT
TTCTTCTGGGAGGCAGATGCCTTTGACAAGGAGACGGGTGCATTCCGACA
ACCCCGGGCCGCCAGCATCAATAAAGTTGGACATGCATTGCATGATCTCG
ACCCCATTTTCCAGCAAATAACCTACACTCCTCAAATCGGCAAGTTGGCT
CGAGCTGTGGGGGGCCTGAGCGTCCCCTTGGTCGCCCAAAGCATGTATAT
TTTCAAGCAGCCGAGGATAGGGGGGAAGGTGGGGGCGCACCAAGACGGCA
CCTTTTTGTACACGGAGCCTCAGTCCGTGGTGGGGTTTTGGTGGGCCTTG
GAAGACTGCACGATGACAAATGGATGCTTGTGGGCAGTGCCGGGATCACA
TAAAGGAGGGGTTACGAGGCGGTTTCGTCGGCGAGGGGAGGAGGGAGGAA
CGGAATTTGTGCCGGCTGCGGCGGGTGGATGGGATTTAGAGGGAGGGTTG
CCGTTGGAGGTAAAGGCGGGGAGTTTGGTATTGTTGCATCATGCGTTGGT
TCACTATAGTCTCGAGAATTTGTCGGCGGCCTCACGGCATGCATTTAGTG
TACATGTGGTGGAGGGGGGGGAAGGGACTTCCTACCCGGAGGATAACTGG
CTGCAACGTGCCCCCGAAATGCCTTTTCAAATGTTGCCTTGA
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protein sequence of NO01G01220.1

>NO01G01220.1-protein ID=NO01G01220.1-protein|Name=NO01G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bp
MTTTSTTAIAPPTLALDNGNKELQLTDDPEVWEDYRRRFETEGYLVLEGY
WSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIR
FFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLA
RAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWAL
EDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGL
PLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNW
LQRAPEMPFQMLP*
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Synonyms
Publications