NO01G01220, NO01G01220 (gene) Nannochloropsis oceanica

Overview
NameNO01G01220
Unique NameNO01G01220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length942
Alignment locationchr1:316834..317775 +

Link to JBrowse

Properties
Property NameValue
DescriptionPhytanoyl-dioxygenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:316834..317775 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO01G01220 vs. NCBI_GenBank
Match: EWM29048.1 (phytanoyl- dioxygenase [Nannochloropsis gaditana])

HSP 1 Score: 484.6 bits (1246), Expect = 2.400e-133
Identity = 229/298 (76.85%), Postives = 255/298 (85.57%), Query Frame = 0
Query:   19 GNKELQL---TDDPEVWEDYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMPFQMLP 314
            G+++L+L    +D ++WE YRRRFE +GYLVLEGYWS+ATC ALR RM+ L+  FDLAAH SVFSTDEQ+RTSD YFL SGDKI +FWE  A DK TGAFRQPRA SINKVGHALHDLDP+FQ++TYTPQIG+LARAVGGL VPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCT  NGCLWAVPGSH+ GV+RRFRRR +  GTEF P  A  WDL GG+PLEVKAG+LVLLHHALVHYSLEN SAASRHA+S+HVVEG   + YP+DNWLQR   MPFQ LP
Sbjct:   10 GSEDLRLPGIEEDRDLWEAYRRRFEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMPFQPLP 307          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: CBN78369.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 364.8 bits (935), Expect = 2.700e-97
Identity = 171/281 (60.85%), Postives = 209/281 (74.38%), Query Frame = 0
Query:   33 EDYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMPFQMLP 314
            E+ R  F  +GYLVL  +WS+  C  +R R+  ++Q+ DL   R++FSTDE     D YFLGSGDKIRFFWEA AFD + G F   R  SINK+GHALHDLDP+ ++ +Y  ++G+++R + GLS PL  QSMYIFKQPRIGG+V  HQDG FLYTEPQSVVG+WWALEDCT++NGCLWAVPGSH+  V RRF+R     G EF P  A  +D+EG +PLEVKAG+L+LLHH++VHYS  N S  SRHA+S+HVVEG EG  YPEDNWLQR  E PFQ LP
Sbjct:   18 EEQREHFNEKGYLVLPDWWSKQECEEIRERVQQVVQDMDLDEARTIFSTDESKHAEDAYFLGSGDKIRFFWEAGAFD-DKGEFVHDRLKSINKIGHALHDLDPVMKKYSYEKRVGQVSRDL-GLSTPLAVQSMYIFKQPRIGGEVTPHQDGAFLYTEPQSVVGYWWALEDCTLSNGCLWAVPGSHRRVVKRRFKRSPTGEGCEFEPPEAEAFDVEGAVPLEVKAGTLILLHHSVVHYSEANTSEKSRHAYSIHVVEGKEGFRYPEDNWLQRPGETPFQELP 296          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_044197022.1 (phytanoyl-CoA dioxygenase family protein [Hyalangium minutum] >KFE62735.1 Phytanoyl-CoA dioxygenase domain containing 1 [Hyalangium minutum])

HSP 1 Score: 291.2 bits (744), Expect = 3.800e-75
Identity = 151/272 (55.51%), Postives = 186/272 (68.38%), Query Frame = 0
Query:   39 FETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMPFQ 311
            FE +GYLVL G+ S A C AL+ R  AL+  F      S+F+T EQ+RTSD YFL SGDK+ FF+E +AF K  G  RQ +A SINK+GHALHDLDP+F+Q +  P +  LA  + GL  PL+ QSMYIFKQP IGG+V +HQD TFLYTEP + +GFW+ALED T+ NGCLWA+PG HK G+ +RF  R   GGT F          EG +PLEVK G+LV+LH  L H S  N S  SRHA+SVH ++     +YP DNWLQRAP+MP Q
Sbjct:    7 FERQGYLVLPGFASEAACDALKARAEALVAAFQ-PETVSIFTTHEQTRTSDAYFLSSGDKVHFFFEENAF-KPDGTLRQGKALSINKIGHALHDLDPLFRQFSRAPGMAALATEL-GLKQPLLLQSMYIFKQPHIGGEVNSHQDSTFLYTEPLTCLGFWFALEDATVENGCLWALPGGHKQGLRKRF-VRAPGGGTAFQVLDPTPMPEEGFVPLEVKKGTLVMLHGQLPHKSGANTSPKSRHAYSVHCIDA--TATYPRDNWLQRAPDMPAQ 272          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: AKJ02956.1 (Phytanoyl-CoA dioxygenase domain containing 1 [Archangium gephyra])

HSP 1 Score: 286.6 bits (732), Expect = 9.500e-74
Identity = 145/272 (53.31%), Postives = 191/272 (70.22%), Query Frame = 0
Query:   37 RRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309
            R FE +G+LVL G+   A C AL+ R   L+  F      S+F+T++Q+RTSD+YFL SGD IRFF+E +AF +  G+ RQ +A SINK+GHALHDLDP+F++ + TP++  LA  + GL+ PL+ QSMYIFKQP IGG+V  HQD TFLYTEP + +GFW+ALED T+ NGCLWA+PG H+ G+ +RF  R   GGT F    +     EG +PLEV+ G+LV+LH  L H S  N S+ SRHA+SVH+++G     YP DNWLQRAP +P
Sbjct:    9 RDFERQGFLVLPGFAPAAACDALKARAEQLVAGFQ-PETVSIFTTNDQTRTSDEYFLASGDDIRFFFEENAF-RPDGSLRQDKALSINKIGHALHDLDPLFERFSRTPELAGLASEL-GLTKPLLLQSMYIFKQPHIGGEVNCHQDATFLYTEPSTCLGFWFALEDATLENGCLWALPGGHRLGLKKRF-VRAAGGGTAFQVLDSTPLPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSSRSRHAYSVHLIDG--TARYPRDNWLQRAPSLP 274          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_047862199.1 (phytanoyl-CoA dioxygenase family protein [Archangium gephyra])

HSP 1 Score: 286.6 bits (732), Expect = 9.500e-74
Identity = 145/272 (53.31%), Postives = 191/272 (70.22%), Query Frame = 0
Query:   37 RRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309
            R FE +G+LVL G+   A C AL+ R   L+  F      S+F+T++Q+RTSD+YFL SGD IRFF+E +AF +  G+ RQ +A SINK+GHALHDLDP+F++ + TP++  LA  + GL+ PL+ QSMYIFKQP IGG+V  HQD TFLYTEP + +GFW+ALED T+ NGCLWA+PG H+ G+ +RF  R   GGT F    +     EG +PLEV+ G+LV+LH  L H S  N S+ SRHA+SVH+++G     YP DNWLQRAP +P
Sbjct:    5 RDFERQGFLVLPGFAPAAACDALKARAEQLVAGFQ-PETVSIFTTNDQTRTSDEYFLASGDDIRFFFEENAF-RPDGSLRQDKALSINKIGHALHDLDPLFERFSRTPELAGLASEL-GLTKPLLLQSMYIFKQPHIGGEVNCHQDATFLYTEPSTCLGFWFALEDATLENGCLWALPGGHRLGLKKRF-VRAAGGGTAFQVLDSTPLPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSSRSRHAYSVHLIDG--TARYPRDNWLQRAPSLP 270          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: GAY05917.1 (phytanoyl-CoA dioxygenase domain-containing protein, putative [Pythium insidiosum] >GAX93782.1 phytanoyl-CoA dioxygenase domain-containing protein, putative [Pythium insidiosum])

HSP 1 Score: 286.2 bits (731), Expect = 1.200e-73
Identity = 137/278 (49.28%), Postives = 183/278 (65.83%), Query Frame = 0
Query:   39 FETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDD-YFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGT------EFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMPF 310
            +ET GYL + G+     C  LR   N  +++ D+  HRS+F+T EQ+R  +D YFL SGDKIRFF+E  AF+ +    R P   +INK+GH LH+LD  F  ++Y P++  + +++  +  P+  QSMYIFKQP IGG+V  HQDGT+LYTEPQSV+GFWWALEDCT+ NGCL+ VPGSH  GV +RFRR   +         E VP     +D+   +P+E K G LVLLH+A VHYS+ N S  SRHA++VH+VE     +YP DNWLQ + + PF
Sbjct:   47 YETNGYLHIPGFLPPEVCDGLRATANEYVKQCDVEKHRSIFTTKEQARRMNDRYFLESGDKIRFFFEEHAFEADQRTLRVPLELAINKIGHNLHNLDAAFHAVSYAPRVKAILQSLEYVR-PMAVQSMYIFKQPSIGGEVSPHQDGTYLYTEPQSVIGFWWALEDCTLDNGCLYGVPGSHVHGVRQRFRRTSADTQAATGNLLETVPPKVEPFDISASVPIETKKGDLVLLHNAFVHYSMANTSPRSRHAYAVHIVE-SHNVAYPADNWLQNSDQKPF 322          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_075011003.1 (phytanoyl-CoA dioxygenase family protein [Stigmatella aurantiaca] >SEN11998.1 phytanoyl-CoA hydroxylase [Stigmatella aurantiaca])

HSP 1 Score: 285.0 bits (728), Expect = 2.800e-73
Identity = 147/270 (54.44%), Postives = 188/270 (69.63%), Query Frame = 0
Query:   39 FETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309
            FE +G+LVL  + +   C AL+ R   L+  F     RS+FSTDEQ RTSD YFL SGD+IRFF+E DAF  + G+ RQ +A SINK+GHALHDLDP+F + + TP +  LA  + GL  PL+ QSMYIFKQP IGG+V +HQD  FLYTEP + +GFW+ALED T+ NGCLWA PG H+ G+ RRF  R  EGGT F    A     EG +PLEV+ G+LV+LH  L H S  N S+ SRHA+S+H+++G    +YPEDNWL+R+P +P
Sbjct:    7 FEHQGFLVLPRFVTAGACDALKQRAETLVDGFQ-PETRSIFSTDEQRRTSDAYFLSSGDQIRFFFEEDAFLPD-GSLRQAQAQSINKIGHALHDLDPLFDRFSRTPALAGLAAEL-GLQRPLLLQSMYIFKQPHIGGEVTSHQDAAFLYTEPSTCLGFWFALEDATLENGCLWAQPGGHRQGLKRRF-VRAPEGGTVFRTLDATPLSEEGMVPLEVEKGTLVVLHGLLPHRSGANTSSRSRHAYSLHLIDG--TATYPEDNWLRRSPALP 270          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_002609838.1 (phytanoyl-CoA dioxygenase family protein [Stigmatella aurantiaca] >EAU69753.1 phyhd1 protein [Stigmatella aurantiaca DW4/3-1] >ADO69369.1 Phytanoyl-CoA dioxygenase family protein [Stigmatella aurantiaca DW4/3-1])

HSP 1 Score: 284.6 bits (727), Expect = 3.600e-73
Identity = 144/272 (52.94%), Postives = 192/272 (70.59%), Query Frame = 0
Query:   37 RRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309
            R FE +G+L+L G+ S  +C AL+ R   L+  F     RS+F+T EQ+RTSD YFL SGD+IRFF+E DAF +  G+ RQP+A SINK+GHALHDL+P+F + + TP++  LA  + GL+ PL+ QSMYIFKQP IGG+V +HQD TFL+TEP + +GFW+ALED T+ NGCLW  P  H+ G+ +RF  R  EGGT F    A     E  +PLEVK G+LV+LH  L H S  N S+ SRHA+S+H+++G    +YPEDNWL+R+P +P
Sbjct:    5 RDFEQQGFLILPGFVSGNSCDALKHRAEELVTGFQ-PETRSIFTTHEQTRTSDAYFLSSGDQIRFFFEEDAF-RPDGSLRQPQALSINKIGHALHDLEPVFDRFSRTPELAALAAEL-GLTRPLLLQSMYIFKQPHIGGEVTSHQDATFLFTEPSTCLGFWFALEDATLENGCLWVQPRGHRQGLKKRF-VRAPEGGTVFRVLDATPLAEEDMVPLEVKKGTLVVLHGMLPHRSGANTSSTSRHAYSLHLIDG--SATYPEDNWLRRSPALP 270          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_073563755.1 (phytanoyl-CoA dioxygenase family protein [Archangium sp. Cb G35] >OJT21697.1 phytanoyl-CoA dioxygenase [Archangium sp. Cb G35])

HSP 1 Score: 284.3 bits (726), Expect = 4.700e-73
Identity = 146/275 (53.09%), Postives = 188/275 (68.36%), Query Frame = 0
Query:   34 DYRRRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMP 309
            D  R F  +GYLVL G+   A C AL+ R   L+  F      S+F+T++Q+RTSD+YFL SGD IRFF+E +AF +  G+ RQ +  SINK+GHALHDLDP+F++ + TP++  LA  + GL+ PL+ QSMYIFKQP IGG+V  HQD TFLYTEP + +GFW+ALED T+ NGCLWA+PG H  G+ +RF  R   GGT F          EG +PLEV+ G+LV+LH  L H S  N S+ SRHA+SVH+++G     YPEDNWL RAP MP
Sbjct:    2 DRARDFVRQGYLVLPGFVPAAACDALKARAEQLVAGFQ-PETVSIFTTNDQTRTSDEYFLSSGDSIRFFFEENAF-RPDGSLRQDKTLSINKIGHALHDLDPLFERFSRTPELAGLASEL-GLTQPLLLQSMYIFKQPHIGGEVNCHQDSTFLYTEPSTCLGFWFALEDATLENGCLWALPGGHTLGLKKRF-VRAPGGGTAFQVLDPTPLPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSSKSRHAYSVHLIDG--TARYPEDNWLHRAPTMP 270          
BLAST of NO01G01220 vs. NCBI_GenBank
Match: WP_002626586.1 (phytanoyl-CoA dioxygenase family protein [Cystobacter fuscus] >EPX60796.1 Phytanoyl-CoA dioxygenase domain containing 1 [Cystobacter fuscus DSM 2262])

HSP 1 Score: 283.1 bits (723), Expect = 1.000e-72
Identity = 144/274 (52.55%), Postives = 189/274 (68.98%), Query Frame = 0
Query:   37 RRFETEGYLVLEGYWSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLARAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGLPLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNWLQRAPEMPFQ 311
            R F  +G+LVL G+     C AL+ R  AL+ +F      S+F+T EQSRTSD+YFL SGD+IRFF+E +AF +  G+ RQ +  SINK+GHA+HDLDP+F++ + TP++  LA  + GL   L+ QSMYIFKQP IGG+V +HQD TFLYTEP + +GFW+ALED T+ NGCLWA+PG H  G+ +RF  R E GGT F    A     EG +PLEV+ G+LV+LH  L H S  N S  SRHA+S+H+++G     YPEDNWL RAP +P +
Sbjct:    5 RDFARQGFLVLPGFVPAHACEALKARAEALVADFQ-PETVSIFTTHEQSRTSDEYFLSSGDQIRFFFEENAF-RPDGSLRQDKTLSINKIGHAMHDLDPVFERFSRTPELAALASEL-GLKQALLLQSMYIFKQPFIGGEVNSHQDSTFLYTEPTTCLGFWFALEDATLENGCLWALPGGHTLGLKKRF-VRAEGGGTAFQVVDATPLPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSPKSRHAYSLHLIDG--TARYPEDNWLHRAPTLPLR 272          
The following BLAST results are available for this feature:
BLAST of NO01G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29048.12.400e-13376.85phytanoyl- dioxygenase [Nannochloropsis gaditana][more]
CBN78369.12.700e-9760.85conserved unknown protein [Ectocarpus siliculosus][more]
WP_044197022.13.800e-7555.51phytanoyl-CoA dioxygenase family protein [Hyalangi... [more]
AKJ02956.19.500e-7453.31Phytanoyl-CoA dioxygenase domain containing 1 [Arc... [more]
WP_047862199.19.500e-7453.31phytanoyl-CoA dioxygenase family protein [Archangi... [more]
GAY05917.11.200e-7349.28phytanoyl-CoA dioxygenase domain-containing protei... [more]
WP_075011003.12.800e-7354.44phytanoyl-CoA dioxygenase family protein [Stigmate... [more]
WP_002609838.13.600e-7352.94phytanoyl-CoA dioxygenase family protein [Stigmate... [more]
WP_073563755.14.700e-7353.09phytanoyl-CoA dioxygenase family protein [Archangi... [more]
WP_002626586.11.000e-7252.55phytanoyl-CoA dioxygenase family protein [Cystobac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008241NSK008241Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01220.1NO01G01220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|627624gene_98Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100024g3gene1566Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01220.1NO01G01220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01220 ID=NO01G01220|Name=NO01G01220|organism=Nannochloropsis oceanica|type=gene|length=942bp
ATGACGACCACCAGCACTACCGCCATCGCACCACCAACACTTGCACTCGA
CAATGGCAACAAGGAGCTCCAACTCACGGATGACCCCGAGGTGTGGGAGG
ACTATCGCAGGCGCTTCGAGACGGAGGGATACCTCGTCTTGGAAGGATAC
TGGTCCCGGGCAACGTGCGCAGCACTCCGTGGCCGAATGAACGCCTTGAT
TCAAGAGTTTGACCTGGCCGCACACCGCTCCGTCTTCTCCACGGACGAGC
AAAGCCGCACTTCCGACGATTACTTCCTCGGGAGTGGCGACAAGATTCGT
TTCTTCTGGGAGGCAGATGCCTTTGACAAGGAGACGGGTGCATTCCGACA
ACCCCGGGCCGCCAGCATCAATAAAGTTGGACATGCATTGCATGATCTCG
ACCCCATTTTCCAGCAAATAACCTACACTCCTCAAATCGGCAAGTTGGCT
CGAGCTGTGGGGGGCCTGAGCGTCCCCTTGGTCGCCCAAAGCATGTATAT
TTTCAAGCAGCCGAGGATAGGGGGGAAGGTGGGGGCGCACCAAGACGGCA
CCTTTTTGTACACGGAGCCTCAGTCCGTGGTGGGGTTTTGGTGGGCCTTG
GAAGACTGCACGATGACAAATGGATGCTTGTGGGCAGTGCCGGGATCACA
TAAAGGAGGGGTTACGAGGCGGTTTCGTCGGCGAGGGGAGGAGGGAGGAA
CGGAATTTGTGCCGGCTGCGGCGGGTGGATGGGATTTAGAGGGAGGGTTG
CCGTTGGAGGTAAAGGCGGGGAGTTTGGTATTGTTGCATCATGCGTTGGT
TCACTATAGTCTCGAGAATTTGTCGGCGGCCTCACGGCATGCATTTAGTG
TACATGTGGTGGAGGGGGGGGAAGGGACTTCCTACCCGGAGGATAACTGG
CTGCAACGTGCCCCCGAAATGCCTTTTCAAATGTTGCCTTGA
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protein sequence of NO01G01220.1

>NO01G01220.1-protein ID=NO01G01220.1-protein|Name=NO01G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bp
MTTTSTTAIAPPTLALDNGNKELQLTDDPEVWEDYRRRFETEGYLVLEGY
WSRATCAALRGRMNALIQEFDLAAHRSVFSTDEQSRTSDDYFLGSGDKIR
FFWEADAFDKETGAFRQPRAASINKVGHALHDLDPIFQQITYTPQIGKLA
RAVGGLSVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWAL
EDCTMTNGCLWAVPGSHKGGVTRRFRRRGEEGGTEFVPAAAGGWDLEGGL
PLEVKAGSLVLLHHALVHYSLENLSAASRHAFSVHVVEGGEGTSYPEDNW
LQRAPEMPFQMLP*
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Synonyms
Publications