NO01G01210, NO01G01210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01210 vs. NCBI_GenBank
Match: EWM29061.1 (Cyclin C/H/T/L [Nannochloropsis gaditana]) HSP 1 Score: 370.5 bits (950), Expect = 7.000e-99 Identity = 194/319 (60.82%), Postives = 235/319 (73.67%), Query Frame = 0 Query: 128 TRQAYFIKSCAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRKGGPAAIGMGAGSNITSSLTF--XXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIKPPTNKGTWLEIFHVQDEARFLSDCSLAIQMYGEENSNFQILNVVDVPEPSSVPLAVTRSGVHSRELEISSLYG--------GGGLRRLSPL 437 T A+ + SCAF+V + K LHLGKVATHTALVFFHRFFKHQSF++HDRLLVA ACIYLAAK EERNNVKLS+IVV YLK++ VLP EVD +YNRNAVARE VP WK RVI+YERCLLYT+AFDLTV HPF+ LQD+MKTVRDVMAEEG+K G + G +SL F DHRT F+QACKFLNDSF P+LI+V+ SYSAALALYLT +LY IKPP KG+WLE++H+QDE RFL DC LA++ YGEE+ + LN+ VP+P++V + + ++++LYG GG LR L+PL Sbjct: 134 THLAFCVSSCAFIVEMGKALHLGKVATHTALVFFHRFFKHQSFRSHDRLLVAAACIYLAAKVEERNNVKLSLIVVAYLKRLGVLPPEVDAQDYNRNAVAREEVPTWKSRVITYERCLLYTMAFDLTVVHPFKALQDLMKTVRDVMAEEGKKTGLS----GGPGKALASLPFPSASSSPAASALDHRTVFAQACKFLNDSFFLPALIEVDASYSAALALYLTLVLYDIKPPAGKGSWLEVWHIQDEPRFLRDCLLAVKTYGEESG--KRLNLEPVPDPAAVEVPPAEDALGR---DMATLYGGSKAGGMPGGLLRNLTPL 443
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_005855403.1 (hypothetical protein NGA_2054200, partial [Nannochloropsis gaditana CCMP526] >EKU20957.1 hypothetical protein NGA_2054200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 186.4 bits (472), Expect = 1.900e-43 Identity = 98/148 (66.22%), Postives = 111/148 (75.00%), Query Frame = 0 Query: 167 HQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRKGGPAAIGMGAGSNITSSLTF--XXXXXXXXPFDHRT 313 HQSF++HDRLLVA ACIYLAAK EERNNVKLS+IVV YLK++ VLP EVD +YNRNAVARE VP WK RVI+YERCLLYT+AFDLTV HPF+ LQD+MKTVRDVMAEEG+K G + G +SL F DHRT Sbjct: 1 HQSFRSHDRLLVAAACIYLAAKVEERNNVKLSLIVVAYLKRLGVLPPEVDAQDYNRNAVAREEVPTWKSRVITYERCLLYTMAFDLTVVHPFKALQDLMKTVRDVMAEEGKKTGLS----GGPGKALASLPFPSASSSSAVSALDHRT 144
BLAST of NO01G01210 vs. NCBI_GenBank
Match: GAX17580.1 (cyclin T [Fistulifera solaris]) HSP 1 Score: 92.0 bits (227), Expect = 4.800e-15 Identity = 76/278 (27.34%), Postives = 120/278 (43.17%), Query Frame = 0 Query: 135 KSCAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKI----------DVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRK----GGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIKPPTNKGTWLEIFHVQDEARFLSDCSLAIQMYGE-ENSNFQILNVV 398 K+C F+ + L L +VA TA+VFFHRF+ SF HDR VA AC+ LAAKTEE + K ++V++ +K+ V P ++DP E K RV+ ER +L+TI F+L++ HP++ L + +K + +G+K +G+ + + A F NDS + +P A +YL + P W + D A +S I++ E + S+ +LN V Sbjct: 29 KTCRFIEESGRILKLPRVAIATAMVFFHRFYAKHSFAQHDRFEVAVACLLLAAKTEE--SPKKLVVVLEECQKLKWRGMQAGSASVKPPDLDP--------KGEEFSKLKERVLLLERVILHTIGFELSIDHPYKFLVEQIKQL-----VQGKKLIYQNNHTPVGLSSPQQQQQHMM-------------NEMVQLAMNFANDSMHTSLCLQFDPKKIALTCVYLAAQFGHLMPANESDDWCDSLLSIDPASLVSIALQLIELIAERKGSDPTVLNQV 278
BLAST of NO01G01210 vs. NCBI_GenBank
Match: CBN74652.1 (Cycline T [Ectocarpus siliculosus]) HSP 1 Score: 89.7 bits (221), Expect = 2.400e-14 Identity = 67/222 (30.18%), Postives = 99/222 (44.59%), Query Frame = 0 Query: 132 YFIKSCAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDV-MAEEGRKGGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGI 353 Y K+ F+ A KEL L A TALVFFH+FF SFQ H+R V +AC++LAAK EE + ++ K V DP N + R + +++ ERC+L+T+ F LTV HP+ + ++K + + +G KG A+ +R A F+NDS + P AA +YL+ L G+ Sbjct: 33 YRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVM----SKSWKVWNGGRDPPAENEKSFKR-----LREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGKGADKAL-------------------------NRQLSQAATSFVNDSLLTTLCLQYRPKQVAAAVVYLSYLYMGL 220
BLAST of NO01G01210 vs. NCBI_GenBank
Match: GAX18019.1 (cyclin T [Fistulifera solaris]) HSP 1 Score: 89.4 bits (220), Expect = 3.100e-14 Identity = 75/278 (26.98%), Postives = 118/278 (42.45%), Query Frame = 0 Query: 135 KSCAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKI----------DVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRK----GGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIKPPTNKGTWLEIFHVQDEARFLSDCSLAIQMYGE-ENSNFQILNVV 398 K+C F+ + L L +VA TA+VFFHRF+ SF HDR VA AC+ LAAKTEE + K ++V++ +K+ V P ++DP E K RV+ ER +L+TI F+L++ HP++ L + +K + +G+K +G+ + + A F NDS + +P A +YL + P W + D S I++ E + S+ +LN V Sbjct: 29 KTCRFIEEAGRILKLPRVAIATAMVFFHRFYAKHSFAQHDRFEVAVACLLLAAKTEE--SPKKLVVVLEECQKLKWRGMQAGSATVKPPDLDP--------KGEEFSKLKERVLLLERVILHTIGFELSIDHPYKFLVEQIKQL-----VQGKKLIYQNNHTPVGLSSPQQQQQHMM-------------NEMVQLAMNFANDSMHTSLCLQFDPKKIAFTCVYLAAQFGHLVPTNESDDWCDSLLSIDSVSLASIALQLIELIAERKGSDPTVLNQV 278
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_002185144.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC43276.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 88.6 bits (218), Expect = 5.300e-14 Identity = 53/132 (40.15%), Postives = 74/132 (56.06%), Query Frame = 0 Query: 135 KSCAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMK 267 K+C F+ + L L +VA TA+VFFHRF+ SFQ HDR VA ACI LAAKTEE KK+ + DE L+ R A E K R++ ER +L+TI F+L++ HP++ L + ++ Sbjct: 18 KTCRFIEEAGRVLKLPRVAVSTAMVFFHRFYAKHSFQDHDRFEVAVACIVLAAKTEESP------------KKLTTVIDECHKLKV-RGMQAGEEFIKLKERILLLERVILHTIGFELSIDHPYKFLVEQIQ 136
BLAST of NO01G01210 vs. NCBI_GenBank
Match: PRP81578.1 (hypothetical protein PROFUN_01085 [Planoprotostelium fungivorum]) HSP 1 Score: 87.4 bits (215), Expect = 1.200e-13 Identity = 66/259 (25.48%), Postives = 111/259 (42.86%), Query Frame = 0 Query: 135 KSCAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQY--LKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRKGGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIKPPTNKG------TWLEIFHVQDEARFLSDCSLAIQMYG 386 K+CAF+ L L ++ TALV+FHRFF + F+ +DR +V T C++LA KTEE +I + + K ++ +E D L + ++ YE +L T+ FDL++THP+++L + +K++ SN+ A F+NDS + +P A+ ++YL + I+ P KG W ++F V+ E C + +YG Sbjct: 31 KTCAFIQEAGMNLRLPQLTIATALVYFHRFFANHKFKEYDRDIVGTTCLFLAGKTEETPKKLKDVIEMSHRIRFKTEIRTEEFDKLRED---------------ILRYELTVLQTVGFDLSITHPYKSLLEFVKSI------------------SGSSNLA---------------------QVAWNFVNDSLRTTLCLQFKPHLIASASIYLASKHLKIQLPEGKGPDGKGRPWWDVFQVRIE-DLEEVCIQILDLYG 234
BLAST of NO01G01210 vs. NCBI_GenBank
Match: XP_024385033.1 (cyclin-T1-3-like [Physcomitrella patens] >XP_024385044.1 cyclin-T1-3-like [Physcomitrella patens] >PNR62172.1 hypothetical protein PHYPA_000596 [Physcomitrella patens]) HSP 1 Score: 84.3 bits (207), Expect = 1.000e-12 Identity = 73/280 (26.07%), Postives = 116/280 (41.43%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMKTVRDVMAEEGRKGGPAAIGMGAGSNITSSLTFXXXXXXXXPFDHRTFFSQACKFLNDSFCNPSLIDVEPSYSAALALYLTTLLYGIK-PPTNKGTWLEIFHVQDEARFLSDCS-LAIQMYGEENSNFQILNVVDVPEPSSV 406 ++ YF KS C FL L L + +V TA+VF HRFF QS + +DR ++AT C++LA K EE +IV Y + + DPL R +E + K V++ ER +L T+ FDL + HP++ L +K + T A F+ND + +P + AA A++L + P W + F V R L + S +++Y + +N ++ + P PS + Sbjct: 57 KETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFHRQSHKRNDRYMIATVCMFLAGKVEETPRPLREVIVFSYHIRF-----KKDPLAKER-IKQKEVIEEQKELVLAGERLVLTTLGFDLNIHHPYKPLVAAIKRFK--------------------------------------VAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNLPKEGDKVWWQEFEV--TPRQLEEVSNQMLELYEQNRNNGATGSLANDPSPSEM 290
BLAST of NO01G01210 vs. NCBI_GenBank
Match: EFJ27727.1 (hypothetical protein SELMODRAFT_147649, partial [Selaginella moellendorffii]) HSP 1 Score: 83.6 bits (205), Expect = 1.700e-12 Identity = 54/139 (38.85%), Postives = 74/139 (53.24%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMK 267 R+ YF KS C FL L L + +V TA+ F HRF+ QS +DR ++AT C++LA K EE V +I V Y L ++ DP NR ++ A K V+ ER +L T+ FDL V HP+R L +K Sbjct: 59 RETYFRKSYCTFLQDLGMRLKVPQVTIATAITFCHRFYLRQSHARNDRFMIATVCMFLAGKVEETPRVLKDVIYVSY-----TLRNKKDPSANNR-IKQKDLYEAQKQLVLYGERLVLTTLGFDLNVHHPYRPLVAAIK 191
BLAST of NO01G01210 vs. NCBI_GenBank
Match: EFJ37217.1 (hypothetical protein SELMODRAFT_140469 [Selaginella moellendorffii]) HSP 1 Score: 83.6 bits (205), Expect = 1.700e-12 Identity = 54/139 (38.85%), Postives = 74/139 (53.24%), Query Frame = 0 Query: 129 RQAYFIKS-CAFLVALSKELHLGKVATHTALVFFHRFFKHQSFQAHDRLLVATACIYLAAKTEERNNVKLSIIVVQYLKKIDVLPDEVDPLEYNRNAVAREAVPAWKFRVISYERCLLYTIAFDLTVTHPFRTLQDMMK 267 R+ YF KS C FL L L + +V TA+ F HRF+ QS +DR ++AT C++LA K EE V +I V Y L ++ DP NR ++ A K V+ ER +L T+ FDL V HP+R L +K Sbjct: 59 RETYFRKSYCTFLQDLGMRLKVPQVTIATAITFCHRFYLRQSHARNDRFMIATVCMFLAGKVEETPRVLKDVIYVSY-----TLRNKKDPSANNR-IKQKDLYEAQKQLVLYGERLVLTTLGFDLNVHHPYRPLVAAIK 191 The following BLAST results are available for this feature:
BLAST of NO01G01210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01210 ID=NO01G01210|Name=NO01G01210|organism=Nannochloropsis oceanica|type=gene|length=1314bpback to top protein sequence of NO01G01210.1 >NO01G01210.1-protein ID=NO01G01210.1-protein|Name=NO01G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=438bpback to top Synonyms
Publications
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