NO01G01200, NO01G01200 (gene) Nannochloropsis oceanica

Overview
NameNO01G01200
Unique NameNO01G01200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2350
Alignment locationchr1:312691..315040 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:312691..315040 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G01200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008245NSK008245Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01200.1NO01G01200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01200.1NO01G01200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01200 ID=NO01G01200|Name=NO01G01200|organism=Nannochloropsis oceanica|type=gene|length=2350bp
AAACGACAGGGTAAAGGTGAGGCTGTAATGGCAACAACAACACATAACGG
GCGGGCTGCCCCCTCCACCCTAGCTGGCCCATCGACGTCGTCAATACCAC
CAAGAAGCCATGACCCCACCACCACTCCCCCTGCACCCGTGAGCACGGAG
CCCGTAGTCTGGGAGGCGCATGTCACCGATTTGATCCGAAAGGACGGTCG
GTGGCGGCAAGTTTGGTCTCTCTTCCTCAAGGCATGCACGATTCCCGACG
ACACAACCACCTACCCGGGCCACGCAACTCAAAAGGAAACACGCAAGGGC
AAGCTGCATCGCGAAGAGCTCGCCCGCTGCTACAAGGATCCATCCGCTTT
CATTGACGGTCTAGCAGAGCTACGGCAAAACTTGCTGTTTCGGCATCACA
AGTGGCGAAGTTCCTCCCTCCCCTCTTTCCTGTCCAGAAGCGACAGTAAT
TGCAGCAGCAGGAGCATCAGTAGCAGCAGCAGCATTAGCATTAGCAGCAA
CAGCGGCAGCGGTGACAGTGGAGGAAACACTCCAAGCCAAAACATAGGTG
TACCCGAATGGAAATCTCACAAGGGGCGTTACATACGCGTGTCTCCAGCA
GCATCAGTTACACTTCTTCCCTTTCCTTCTTCCTCTATTTCTTCTTCGTC
CCCGTCGTTCTCACCCTTTATTGTCGAGGACGAAGAGACCCAAATGCGCG
AATTGCTCGTTACCCTTCTGAGCAGCAAAGTGGATCAGGGCTACCGAAGA
GAAATAGAAAACCAAACTACCAGCAGCACCACCAAAAACAAACAGCAGCA
ACTACAGCAACAGCAACAGCAACAGCAGCAGCAGCATCAACAACAACAGC
AACAATCAGAGCAACTGGAGGACACAGACGTCCGAATCCGTGGTTTTTCT
TACTTCCCCCCCCACGGCTACCAAAGCTGGCGTAAAAACGTCTTTGACAA
ATCCAGCTCTTATCGCCTTACCCTCGTGCATAACGTACCCTCGGGCCGCA
GTTCGTTTCGATATCGGCACCCAAGTACTGGCCTCCTTCACACCCTCCCT
GCTATAGACGGTACCGTTCGTCTTGTTCGTGTCTCCATTCCTCCCTCCTC
CTCCTTATCCTCTTTCTCCTCCTCTCGAGGTTGGGGGGCAGGAAGGGCAG
CGCCAGTTTGGCATTGCACGACGGCAGAAGATGGCCATTTGTGGTGTTTG
TCGTACCAGCTCTCGGCGAGGGCAGGACACCAGATGTTGCAAGATGGATG
TTTACGACCGGTGGTGCCCCTGCGGCCCCTCAAGCTGAGCGTCAAGATTC
CACCACCAGGGGAGGGAGAAAGGGGGGGAGGGAGGAGGAGTGGTGGGGAG
GAAGAGAAGAAGCGAAGTACGACTCCTTTGGCGGTGTCTTTCTTGTTTGG
GCATCGACGGCATCCGTTGCCGGGGCAGGAACAGATGTATCGGCAGCAGC
AGCAGCAGCAGGAAGAGCAGGGGGGAGGAGTGGTCAAGGTCCCAACGCCC
GGCAGTGGGAGCAGCAAAGGAGGGAGTGGGAGGAACAGCAGAAATGTGAC
CTTGGAGCGAGGCAGTCGCAACCTGGATGGAGGGCGGGGGATGGAGGGAG
GGCGGGACGAAGAAGGAGCAGGAATTGATGATAGCAAGACGGGAGAATGG
GACGAGGGAGGTTGGGACGGAGGGAGGGATGGAGGGGGAAGGTGGGGCGA
TGATTGTGATGATTTAGAGTCGGAGATGGGGGCATCTATTTCCAGTTCGT
GTGCGTGGGTGAGAAGTGGAGAGTTGAGCTCAGGGGAAGATGAAGGGGAG
GGGGGCGAGGGTGAAGGTAGGGAGATGATGCTGGCATCATCGTTTTGCGA
TGTGAGGTTGAATGAAGTGGTGGGAGGCTAGGATGAGGGAGAGAGGAAGG
AAAAGAAGGAGGATTTGGTGTGAACAGAGGTAGGGGGGAAACTGTATATT
TTTTAGAGTGCATTGAAATTTTGGAGGGCGGCAGAATGGAACGGACAGCG
AGTTTGATAGCAGAGTTTAGTGTGCTTGATCGCAGCGTAATTTTTTTTAC
TCCGTATGATGTCGATGTACTGTTCAACTATTGTTTGAATTTGGGGGGTA
TTTTCTTGAAGCCTTAAGTGCTTGTAAAATACACATGCTGCACGGCACCA
CGTGGCCTGTTTTAGAAGTAGCATTCATTTATACAACAAACTCCCTTGCC
GACTCAATAGACGTCGTTTTTTGTTAACCAGACGCTGGCGCGGAGAGACA
CGGCCAGCCAGACAGACAGACGCAAATAAAAGTTTTTCACGACTGTCAAA
GATTAAGAAGAGATAAATAAGAAACTCAAAACGACGCATGGAATTCACGA
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protein sequence of NO01G01200.1

>NO01G01200.1-protein ID=NO01G01200.1-protein|Name=NO01G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=618bp
MATTTHNGRAAPSTLAGPSTSSIPPRSHDPTTTPPAPVSTEPVVWEAHVT
DLIRKDGRWRQVWSLFLKACTIPDDTTTYPGHATQKETRKGKLHREELAR
CYKDPSAFIDGLAELRQNLLFRHHKWRSSSLPSFLSRSDSNCSSRSISSS
SSISISSNSGSGDSGGNTPSQNIGVPEWKSHKGRYIRVSPAASVTLLPFP
SSSISSSSPSFSPFIVEDEETQMRELLVTLLSSKVDQGYRREIENQTTSS
TTKNKQQQLQQQQQQQQQQHQQQQQQSEQLEDTDVRIRGFSYFPPHGYQS
WRKNVFDKSSSYRLTLVHNVPSGRSSFRYRHPSTGLLHTLPAIDGTVRLV
RVSIPPSSSLSSFSSSRGWGAGRAAPVWHCTTAEDGHLWCLSYQLSARAG
HQMLQDGCLRPVVPLRPLKLSVKIPPPGEGERGGGRRSGGEEEKKRSTTP
LAVSFLFGHRRHPLPGQEQMYRQQQQQQEEQGGGVVKVPTPGSGSSKGGS
GRNSRNVTLERGSRNLDGGRGMEGGRDEEGAGIDDSKTGEWDEGGWDGGR
DGGGRWGDDCDDLESEMGASISSSCAWVRSGELSSGEDEGEGGEGEGREM
MLASSFCDVRLNEVVGG*
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Synonyms
Publications