NO01G01060, NO01G01060 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G01060
Unique Name	NO01G01060
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3892
Alignment location	chr1:264134..268025 +

Link to JBrowse

Properties


Property Name	Value
Description	Unknown protein

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:264134..268025 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0010457	centriole-centriole cohesion
GO:0007099	centriole replication

Homology

[Close]

BLAST of NO01G01060 vs. NCBI_GenBank
Match: EWM29038.1 (hypothetical protein Naga_100071g14 [Nannochloropsis gaditana])

HSP 1 Score: 224.9 bits (572), Expect = 1.300e-54
Identity = 289/883 (32.73%), Postives = 348/883 (39.41%), Query Frame = 0

Query:    1 MPPASSAVFRGSSSGGTTAVDISGMEEGEGAPMHRRLHTLQSKLLVLGYNEHVGSESVELVERLFEDLVMTSESYERMQSREDRVSHDLALAQAQHLPLRKTVSRLTRENNLLHTQLLRAADIEDGRAVAWKKDMGAMRADLLATQQQLQEKXXXXXXXXXXVKALERELRRLVATGEAKGVEFDTPIXXXXXXXXXXXXXXXXXXXXXXXXXRVELIHALERRVVEVENENEILREEGGRIRRALQERDDEITRLGNMIEEEREGXXXXXXXXXXRQANARILEQLDSQVDFLNSQLAAKEAQLQALGLGGEGGGQEDVIRGGQEVRRVLRAQVQQLQKEKSGCLQQMGFMQDRLKVTEEELEEMRHRYAVAVGGEKGEAEKERLRKECGKWXXXXXXXXXXXXXXXXXXXXXXXXXHVVLREKEELKTRMEGLAPKLSAARAEVGRLKQRLMYLGGEGAGEXXXXXXXXXXXXAEDEIRRLKSHVISLEHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALDRARREVLLLQTAQTAQRQELEAALREAVREKDSHEELQARFDVMRTQLVQKEEQVQQLKALFTQLHLGRDQINVRLQQSYVEVSEAEERERGAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREQAQYERTVRRLQADLEEESRLKEGAREELAVREREGRAMQRRMEGVVFEAGEAKNMVHSRLLEVRALRDDLLIMTREAQATQGELGRVGRERXXXXXXXXXXXXXXXXXXGLLRGLEAERNDLRASYRVVQEEVERLTYTLNEMGRAQREQQMALGQTRAALLATER 884
            MPPA+SA FR SSSGGTTAV+ SGM + E AP+HRRLH LQSKL +LGY + VG++S+ELVE+LF+DLV TSESYER+Q RED +SHDLAL+Q Q LPLRKT++RLTRENN LH+Q+L A    D + V WK++M A++ DL+ATQ  LQEK                                                               E+    ERR V                                                                          ++ Q+QA  L     G++   RGG                                          R   +   G E   A +E                                                 GL                  +   G+G+                                                                                                                      L   +  Q QELEA +R++VREKD++ E  AR +V R +L +KEEQV+Q K+LF QLH GRDQINVRLQQSY E++ AEERER A +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                           MVHSRLLE+RALRDDL+IMTREAQATQG+L R  RER                  G LRG+EAERNDL  SY+  QEEV RLTY LN++GRAQREQQ+ALGQTRAALL+ E+
Sbjct:    1 MPPAASATFRASSSGGTTAVETSGMADEERAPLHRRLHVLQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHDLALSQDQILPLRKTIARLTRENNDLHSQVLHAVRAVDKKEVEWKREMAAVQGDLVATQDLLQEK---------------------------------------------------------------EMACRAERRKV--------------------------------------------------------------------------RQLQVQAKRLRAAFSGED---RGGS-----------------------------------------RTTTSFPFGEEIAGASEEG-----------------------------------------------AGLDXXXXXXXXXXXXXXXXXV---GQGS--------------------------------------------------------------------------------------------------------------------TFLAMERRVQDQELEAVMRDSVREKDAYHEALARLEVARAELARKEEQVEQFKSLFDQLHTGRDQINVRLQQSYAEITAAEEREREAKDKAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVHSRLLEIRALRDDLMIMTREAQATQGQLQRAEREREEYRQVVEESRIRAEEAEGSLRGMEAERNDLLGSYKAAQEEVSRLTYNLNQLGRAQREQQVALGQTRAALLSMEK 536

[Close]

BLAST of NO01G01060 vs. NCBI_GenBank
Match: CBN73956.1 (basal body protein [Ectocarpus siliculosus])

HSP 1 Score: 99.4 bits (246), Expect = 8.500e-17
Identity = 110/412 (26.70%), Postives = 170/412 (41.26%), Query Frame = 0

Query:   25 MEEGEGAPMHRRLHTLQSKLLVLGYNEHVGSESVELVERLFEDLVMTSESYERMQSREDRVSHDLALAQAQHLPLRKTVSRLTRENNLLHTQLLRAADIEDG----------RAVAWKKDMGAMRAD----LLATQQQLQEKXXXXXXXXXXVKALEREL----------RRLVATGEAKGVEFDTPIXXXXXXXXXXXXXXXXXXXXXXXXXR----------------VELIHALERRVVEVENENEILREEGGRIRRALQERDDEITRLGNMIEEEREGXXXXXXXXXXRQANARILEQLDSQVDFLNSQLAAKEAQLQALGLGGEGGGQEDVIRGGQEVRRVLRAQVQQLQKEKSGCLQQMGFMQDRLKVTEEELEEMRHRYAVAVGGEK-------GEAEKERLRKE 390
            M    G  + +RL   +++LL L Y++   +ES+ LVERLFEDLV T+ESYE +Q RED+ + DLAL++AQ  PL+K  +RL R+NNLLH ++++AA+   G          RA A +++   + A     +   + Q+ +             A + +L          RR        G++ +  +                         R                 +++  L  R+ E       + EE  R+ + ++ R   I RLG     +              +AN RI++QL+ QVDFLN QLA +EAQL          G+ + +    E+  V R Q      E+           DRL     ELE      +   GG +       GE E ER + E
Sbjct:    1 MSTSAGVSVQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKAAEDASGAERSFLLLEKRAEAEREESRCLGAQKDLRISELEAQVDQLRTSLAGALDGATATQEDLAGGRTGRATARRRSRVQGLNGLDREMEVSSPMMPLSSHEGGGRGGARSGSGRRREDDVGMGLGPEDEQRLSDVVETLRARLEEASQSLSGMEEERARLEKQVESRXXXIARLGRQTGSDTN--IEKVTLAHAYEANQRIVDQLNDQVDFLNRQLANREAQLAEARKETSNRGKAEPMTTTAEL-EVTRLQTLARTLEED---------NDRLSRRTAELENKASANSSGKGGGEEEGWEVVGEGEHERSQLE 400

[Close]

BLAST of NO01G01060 vs. NCBI_GenBank
Match: GBG23889.1 (Centrosomal protein of 135 kDa [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 80.9 bits (198), Expect = 3.100e-11
Identity = 75/301 (24.92%), Postives = 120/301 (39.87%), Query Frame = 0

Query:   32 PMHRRLHTLQSKLLVLGYNEHVGSESVELVERLFEDLVMTSESYERMQSREDRVSHDLALAQAQHLPLRKTVSRLTRENNLLHTQLLRAADIEDGRAVAWKKDMGAMRADLLATQQQLQEKXXXXXXXXXXVKALERELRRLVATGEAKGVEFDTPIXXXXXXXXXXXXXXXXXXXXXXXXXRVELIHALERRVVEVENENEILREEGGRIRRALQERDDEITRLGNMIEEER-------------------EGXXXXXXXXXXRQANARILEQLDSQVDFLNSQLAAKEAQLQALGLGGE 314
            P+ +     +++L  + Y + +G ES+ELV  L  DLVMT+ S+E+ Q + + +  +LAL Q     LR+  SRL RENN LH  ++R A+  D       +   A++A L     +  E           +   ER L      G                                        +  LE R+  +  E   LR +   + + ++ RD E+ RLG  +                       EG          R A+ +++ QL  Q+DFL++QL  KE++LQ  GL G+
Sbjct:   11 PVVQAYEETKAELAAMEYYDFLGIESLELVRSLLADLVMTTTSHEKQQEKIETMERELALTQESVFTLRRENSRLVRENNQLHIDMIRRAEDLD-------EQERALQAKLQEANDRTSEAKFAADQFKRRLDTAERALSAARQAGTQSQPPSPPRADLSMSQALGEAAPVPGAPGQQSESASERNVAMLEERLAGITREASELRGKLAHVSKQVELRDAEVIRLGKELARREFAPQSAAASATGTAENPAAEGPEPTRQLQQARFADEKVVAQLYDQIDFLSAQLQDKESKLQKAGLDGK 304

[Close]

BLAST of NO01G01060 vs. NCBI_GenBank
Match: ETK78021.1 (hypothetical protein L915_15877 [Phytophthora parasitica] >ETL31451.1 hypothetical protein L916_15776 [Phytophthora parasitica] >ETO66581.1 hypothetical protein F444_16317 [Phytophthora parasitica P1976])

HSP 1 Score: 77.0 bits (188), Expect = 4.500e-10
Identity = 84/341 (24.63%), Postives = 143/341 (41.94%), Query Frame = 0

Query:   35 RRLHTLQSKLLVLGYNEHVGSESVELVERLFEDLVMTSESYERMQSREDRVSHDLALAQAQHLPLRKTVSRLTRENNLLHTQLLRAADIEDGRAVAWKKDMGAMRADLLATQQQLQEKXXXXXXXXXXVKALERELRRLVATGEAK---GVEFDTPIXXXXXXXXXXXXXXXXXXXXXXXXXRVELIHALERRVVEVENENEILREEGGRIRRALQERDDEITRLGNM---IEEEREGXXXXXXXXXXR-------QANARILEQLDSQVDFLNSQLAAKEAQLQALGLGGEGGGQEDVIRGGQEVRRVLRAQVQQLQKEKSGCLQQMGFMQDRLKVTEEE 363
            R +  LQS+L  + Y+E  G ES  LV RL  DL+  SE+ E  + + ++   D        LPLRK  ++LT+ENN LH +++   +    R  A +  +  +R D+   Q    +K          V  L+ +L R++ATG A    G                                  ++   L+ ++  +  ENE LR +  +    L +R+ EI RL  +   +  ++E           R       +A     EQL +QVD LN Q+A  E++L+           E + R G    R     +QQ + ++   ++++  ++ + +V EEE
Sbjct:   16 RSVGELQSQLRAMSYSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQILLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLRDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLATGGAVPGFGSASIEMRGSDVSLSPRRLSIDSPQRRVQQPEQHAQVAKDLQEQLSALTRENEKLRAQCEQFDDKLAKREKEIDRLSKLSVQVVSDKESSSRKLQDLEERYQTRSKQEAMELHAEQLSTQVDILNDQVAKYESRLKE--------ATEQIRRNGDIAER-----LQQAELDREHFVKELNVLRTKYQVLEEE 343

[Close]

BLAST of NO01G01060 vs. NCBI_GenBank
Match: ETL84707.1 (hypothetical protein L917_15573 [Phytophthora parasitica])

HSP 1 Score: 77.0 bits (188), Expect = 4.500e-10
Identity = 84/341 (24.63%), Postives = 143/341 (41.94%), Query Frame = 0

Query:   35 RRLHTLQSKLLVLGYNEHVGSESVELVERLFEDLVMTSESYERMQSREDRVSHDLALAQAQHLPLRKTVSRLTRENNLLHTQLLRAADIEDGRAVAWKKDMGAMRADLLATQQQLQEKXXXXXXXXXXVKALERELRRLVATGEAK---GVEFDTPIXXXXXXXXXXXXXXXXXXXXXXXXXRVELIHALERRVVEVENENEILREEGGRIRRALQERDDEITRLGNM---IEEEREGXXXXXXXXXXR-------QANARILEQLDSQVDFLNSQLAAKEAQLQALGLGGEGGGQEDVIRGGQEVRRVLRAQVQQLQKEKSGCLQQMGFMQDRLKVTEEE 363
            R +  LQS+L  + Y+E  G ES  LV RL  DL+  SE+ E  + + ++   D        LPLRK  ++LT+ENN LH +++   +    R  A +  +  +R D+   Q    +K          V  L+ +L R++ATG A    G                                  ++   L+ ++  +  ENE LR +  +    L +R+ EI RL  +   +  ++E           R       +A     EQL +QVD LN Q+A  E++L+           E + R G    R     +QQ + ++   ++++  ++ + +V EEE
Sbjct:   16 RSVGELQSQLRAMSYSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQILLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLRDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLATGGAVPGFGSASIEMRGSDVSLSPRRLSIDSPQRRVQQPEQHAQVAKDLQEQLSALTRENEKLRAQCEQFDDKLAKREKEIDRLSKLSVQVVSDKESSSRKLQDLEERYQTRSKQEAMELHAEQLSTQVDILNDQVAKYESRLKE--------ATEQIRRNGDIAER-----LQQAELDREHFVKELNVLRTKYQVLEEE 343

[Close]

BLAST of NO01G01060 vs. NCBI_GenBank
Match: ETM37850.1 (hypothetical protein L914_15724 [Phytophthora parasitica])

HSP 1 Score: 77.0 bits (188), Expect = 4.500e-10
Identity = 84/341 (24.63%), Postives = 143/341 (41.94%), Query Frame = 0

Query:   35 RRLHTLQSKLLVLGYNEHVGSESVELVERLFEDLVMTSESYERMQSREDRVSHDLALAQAQHLPLRKTVSRLTRENNLLHTQLLRAADIEDGRAVAWKKDMGAMRADLLATQQQLQEKXXXXXXXXXXVKALERELRRLVATGEAK---GVEFDTPIXXXXXXXXXXXXXXXXXXXXXXXXXRVELIHALERRVVEVENENEILREEGGRIRRALQERDDEITRLGNM---IEEEREGXXXXXXXXXXR-------QANARILEQLDSQVDFLNSQLAAKEAQLQALGLGGEGGGQEDVIRGGQEVRRVLRAQVQQLQKEKSGCLQQMGFMQDRLKVTEEE 363
            R +  LQS+L  + Y+E  G ES  LV RL  DL+  SE+ E  + + ++   D        LPLRK  ++LT+ENN LH +++   +    R  A +  +  +R D+   Q    +K          V  L+ +L R++ATG A    G                                  ++   L+ ++  +  ENE LR +  +    L +R+ EI RL  +   +  ++E           R       +A     EQL +QVD LN Q+A  E++L+           E + R G    R     +QQ + ++   ++++  ++ + +V EEE
Sbjct:   16 RSVGELQSQLRAMSYSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQILLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLRDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLATGGAVPGFGSASIEMRGSDVSLSPRRLSIDSPQRRVQQPEQHAQVAKDLQEQLSALTRENEKLRAQCEQFDDKLAKREKEIDRLSKLSVQVVSDKESSSRKLQDLEERYQTRSKQEAMELHAEQLSTQVDILNDQVAKYESRLKE--------ATEQIRRNGDIAER-----LQQAELDREHFVKELNVLRTKYQVLEEE 343

[Close]

BLAST of NO01G01060 vs. NCBI_GenBank
Match: ETI37812.1 (hypothetical protein F443_16327 [Phytophthora parasitica P1569])

HSP 1 Score: 75.5 bits (184), Expect = 1.300e-9
Identity = 87/363 (23.97%), Postives = 149/363 (41.05%), Query Frame = 0

Query:   35 RRLHTLQSKLLVLGYNEHVGSESVELVERLFEDLVMTSESYERMQSREDRVSHDLALAQAQHLPLRKTVSRLTRENNLLHTQLLRAADIEDGRAVAWKKDMGAMRADLLATQQQLQEKXXXXXXXXXXVKALERELRRLVATGEAK---GVEFDTPIXXXXXXXXXXXXXXXXXXXXXXXXXRVELIHALERRVVEVENENEILREEGGRIRRALQERDDEITRLGNM---IEEEREGXXXXXXXXXXR-------QANARILEQLDSQVDFLNSQLAAKEAQLQALGLGGEGGGQEDVIRGGQEVRRVLRAQVQQLQKEKSGCLQQMGFMQDRLKVTEEELEEMRHRYAVAVGGEKGEAEKE 385
            R +  LQS+L  + Y+E  G ES  LV RL  DL+  SE+ E  + + ++   D        LPLRK  ++LT+ENN LH +++   +    R  A +  +  +R D+   Q    +K          V  L+ +L R++ATG A    G                                  ++   L+ ++  +  ENE LR +  +    L +R+ EI RL  +   +  ++E           R       +A     EQL +QVD LN Q+A  E++L+           E + R G    R     +QQ + ++   ++++  ++ + +V EEE       +  A      ++E E
Sbjct:   16 RSVGELQSQLRAMSYSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQILLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLRDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLATGGAVPGFGSASIEMRGSDVSLSPRRLSIDSPQRRVQQPEQHAQVAKDLQEQLSALTRENEKLRAQCEQFDDKLAKREKEIDRLSKLSVQVVSDKESSSRKLQDLEERYQTRSKQEAMELHAEQLSTQVDILNDQVAKYESRLKE--------ATEQIRRNGDIAER-----LQQAELDREHFVKELNVLRTKYQVLEEEYSRCGDAHVPASQPVAADSEAE 365

[Close]

BLAST of NO01G01060 vs. NCBI_GenBank
Match: XP_008911444.1 (hypothetical protein PPTG_16358 [Phytophthora parasitica INRA-310] >ETN03328.1 hypothetical protein PPTG_16358 [Phytophthora parasitica INRA-310])

HSP 1 Score: 75.5 bits (184), Expect = 1.300e-9
Identity = 87/363 (23.97%), Postives = 149/363 (41.05%), Query Frame = 0

Query:   35 RRLHTLQSKLLVLGYNEHVGSESVELVERLFEDLVMTSESYERMQSREDRVSHDLALAQAQHLPLRKTVSRLTRENNLLHTQLLRAADIEDGRAVAWKKDMGAMRADLLATQQQLQEKXXXXXXXXXXVKALERELRRLVATGEAK---GVEFDTPIXXXXXXXXXXXXXXXXXXXXXXXXXRVELIHALERRVVEVENENEILREEGGRIRRALQERDDEITRLGNM---IEEEREGXXXXXXXXXXR-------QANARILEQLDSQVDFLNSQLAAKEAQLQALGLGGEGGGQEDVIRGGQEVRRVLRAQVQQLQKEKSGCLQQMGFMQDRLKVTEEELEEMRHRYAVAVGGEKGEAEKE 385
            R +  LQS+L  + Y+E  G ES  LV RL  DL+  SE+ E  + + ++   D        LPLRK  ++LT+ENN LH +++   +    R  A +  +  +R D+   Q    +K          V  L+ +L R++ATG A    G                                  ++   L+ ++  +  ENE LR +  +    L +R+ EI RL  +   +  ++E           R       +A     EQL +QVD LN Q+A  E++L+           E + R G    R     +QQ + ++   ++++  ++ + +V EEE       +  A      ++E E
Sbjct:   16 RSVGELQSQLRAMSYSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQILLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLRDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLATGGAVPGFGSASIEMRGSDVSLSPRRLSIDSPQRRVQQPEQHAQVAKDLQEQLSALTRENEKLRAQCEQFDDKLAKREKEIDRLSKLSVQVVSDKESSSRKLQDLEERYQTRSKQEAMELHAEQLSTQVDILNDQVAKYESRLKE--------ATEQIRRNGDIAER-----LQQAELDREHFVKELNVLRTKYQVLEEEYSRCGDAHVPASQPVAADSEAE 365

[Close]

BLAST of NO01G01060 vs. NCBI_GenBank
Match: ETP35738.1 (hypothetical protein F442_16177 [Phytophthora parasitica P10297])

HSP 1 Score: 73.9 bits (180), Expect = 3.800e-9
Identity = 86/363 (23.69%), Postives = 149/363 (41.05%), Query Frame = 0

Query:   35 RRLHTLQSKLLVLGYNEHVGSESVELVERLFEDLVMTSESYERMQSREDRVSHDLALAQAQHLPLRKTVSRLTRENNLLHTQLLRAADIEDGRAVAWKKDMGAMRADLLATQQQLQEKXXXXXXXXXXVKALERELRRLVATGEAK---GVEFDTPIXXXXXXXXXXXXXXXXXXXXXXXXXRVELIHALERRVVEVENENEILREEGGRIRRALQERDDEITRLGNM---IEEEREGXXXXXXXXXXR-------QANARILEQLDSQVDFLNSQLAAKEAQLQALGLGGEGGGQEDVIRGGQEVRRVLRAQVQQLQKEKSGCLQQMGFMQDRLKVTEEELEEMRHRYAVAVGGEKGEAEKE 385
            R +  LQS+L  + ++E  G ES  LV RL  DL+  SE+ E  + + ++   D        LPLRK  ++LT+ENN LH +++   +    R  A +  +  +R D+   Q    +K          V  L+ +L R++ATG A    G                                  ++   L+ ++  +  ENE LR +  +    L +R+ EI RL  +   +  ++E           R       +A     EQL +QVD LN Q+A  E++L+           E + R G    R     +QQ + ++   ++++  ++ + +V EEE       +  A      ++E E
Sbjct:   16 RSVGELQSQLRAMSFSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQILLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLRDDVKKLQFLNTQKTQQCTKKEQEVAKLQAQLERVLATGGAVPGFGSASIEMRGSDVSLSPRRLSIDSPQRRVQQPEQHAQVAKDLQEQLSALTRENEKLRAQCEQFDDKLAKREKEIDRLSKLSVQVVSDKESSSRKLQDLEERYQTRSKQEAMELHAEQLSTQVDILNDQVAKYESRLKE--------ATEQIRRNGDIAER-----LQQAELDREHFVKELNVLRTKYQVLEEEYSRCGDAHVPASQPVAADSEAE 365

[Close]

BLAST of NO01G01060 vs. NCBI_GenBank
Match: ETP07705.1 (hypothetical protein F441_16147 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 73.6 bits (179), Expect = 5.000e-9
Identity = 84/341 (24.63%), Postives = 144/341 (42.23%), Query Frame = 0

Query:   35 RRLHTLQSKLLVLGYNEHVGSESVELVERLFEDLVMTSESYERMQSREDRVSHDLALAQAQHLPLRKTVSRLTRENNLLHTQLLRAADIEDGRAVAWKKDMGAMRADLLATQQQLQEKXXXXXXXXXXVKALERELRRLVATGEAK---GVEFDTPIXXXXXXXXXXXXXXXXXXXXXXXXXRVELIHALERRVVEVENENEILREEGGRIRRALQERDDEITRLGNM---IEEEREGXXXXXXXXXXR-------QANARILEQLDSQVDFLNSQLAAKEAQLQALGLGGEGGGQEDVIRGGQEVRRVLRAQVQQLQKEKSGCLQQMGFMQDRLKVTEEE 363
            R +  LQS+L  + Y+E  G ES  LV RL  DL+  SE+ E  + + ++   D        LPLRK  ++LT+ENN LH +++   +    R  A +  +  ++ D+   Q    +K        XX   L+ +L R++ATG A    G                                  ++   L+ ++  +  ENE LR +  +    L +R+ EI RL  +   +  ++E           R       +A     EQL +QVD LN Q+A  E++L+           E + R G    R     +QQ + ++   ++++  ++ + +V EEE
Sbjct:   16 RSVGELQSQLRAMSYSEPFGVESARLVRRLLTDLLTASEARETAEKKLEKAQRDALELSQILLPLRKENAQLTKENNSLHLEIIHQEEAITEREKACELQLEGLQDDVKKLQFLNTQKTQQCTKKEXXXXXLQAQLERVLATGGAVPGFGSASIEMRGSDVSLSPRRLSIDSPQRRVQQPEQHAQVAKDLQEQLSALTRENEKLRAQCEQFDDKLAKREKEIDRLSKLSVQVVSDKESSSRKLQDLEERYQTRSKQEAMELHAEQLSTQVDILNDQVAKYESRLKE--------ATEQIRRNGDIAER-----LQQAELDREHFVKELNVLRTKYQVLEEE 343

The following BLAST results are available for this feature:

BLAST of NO01G01060 vs. NCBI_GenBank

BLAST of NO01G01060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 14


Match Name	E-value	Identity	Description
EWM29038.1	1.300e-54	32.73	hypothetical protein Naga_100071g14 [Nannochlorops...	[more]
CBN73956.1	8.500e-17	26.70	basal body protein [Ectocarpus siliculosus]	[more]
GBG23889.1	3.100e-11	24.92	Centrosomal protein of 135 kDa [Aurantiochytrium s...	[more]
ETK78021.1	4.500e-10	24.63	hypothetical protein L915_15877 [Phytophthora para...	[more]
ETL84707.1	4.500e-10	24.63	hypothetical protein L917_15573 [Phytophthora para...	[more]
ETM37850.1	4.500e-10	24.63	hypothetical protein L914_15724 [Phytophthora para...	[more]
ETI37812.1	1.300e-9	23.97	hypothetical protein F443_16327 [Phytophthora para...	[more]
XP_008911444.1	1.300e-9	23.97	hypothetical protein PPTG_16358 [Phytophthora para...	[more]
ETP35738.1	3.800e-9	23.69	hypothetical protein F442_16177 [Phytophthora para...	[more]
ETP07705.1	5.000e-9	24.63	hypothetical protein F441_16147 [Phytophthora para...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL006	nonsL006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR047	ncniR047	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR091	ngnoR091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK008265	NSK008265	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO01G01060.1	NO01G01060.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|657414	gene_82	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100071g14	gene1582	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO01G01060.1	NO01G01060.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO01G01060 ID=NO01G01060|Name=NO01G01060|organism=Nannochloropsis oceanica|type=gene|length=3892bp
ATGCCTCCCGCGTCCTCTGCTGTCTTCCGCGGGAGTAGCAGTGGAGGGAC
CACGGCGGTGGACATCAGTGGGATGGAGGAAGGAGAAGGCGCGCCTATGC
ATCGACGCCTTCATACGTTGCAAAGCAAACTGTTGGTGTTGGGGTACAAT
GAGCATGTAGGCAGCGAGTCGGTGGAGTTGGTCGAGCGGTTGTTTGAGGA
TCTGGTGATGACGTCGGAAAGCTATGAGCGCATGCAATCAAGAGAAGATC
GGGTGTCGCATGACTTAGCCTTGGCACAGgtagggagcggaagggaggaa
gggagggaggaagggagggagggaaggcgctcaagaaagttgctacgcca
caattagacgagttctgctataagcaggaggaaacgaaaagcgtgtcaat
gctacaggagtgcgcagggcacatctcatatacccgtcctcaccacttaa
tccccagGCCCAACATCTACCCCTCCGCAAAACCGTTTCCCGACTCACCC
GCGAGAATAACCTCCTCCATACTCAACTCCTCCGCGCCGCTGACATCGAA
GACGGGAGGGCGGTCGCGTGGAAGAAAGACATGGGAGCGATGCGCGCCGA
TCTGTTGGCGACCCAGCAGCAGCTGCAGGAGAAGGAGAGGAGATGGAGGG
AGGAGAGACGAAGGGTGAAGGCGCTGGAGAGGGAGTTGAGGAGACTGGTA
GCTACGGGGGAAGCGAAAGGGGTGGAATTTGATACACCTATTCTGTTGGA
TGACGAAGAAGTGGAGGAAGAAAGGAAAGGAGGAGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGAATAGGGTGGAACTCATTCATGCGCTGGAACGACGG
GTGGTGGAGGTGGAGAATGAGAACGAGATATTGAGGGAGGAAGGGGGCCG
AATCCGGCGGGCTTTACAAGAACGCGACGACGAAATCACCCGTCTGGGGA
ATATGATCGAAGAGGAGAGGGAGGGAGGTAGGGAGGGAGGGAGGGGAGGA
GCGGCACGGCAGGCGAACGCGCGGATTCTGGAACAGCTGGACAGTCAGGT
CGATTTTTTGAATTCTCAGTTGGCTGCCAAGGAAGCACAGCTCCAGGCGT
TGGGGCTAGGGGGCGAGGGAGGGGGGCAGGAAGATGTGATAAGGGGAGGG
CAGGAGGTCAGGAGGGTACTACGGGCACAGGTGCAGCAGCTGCAGAAGGA
AAAGAGTGGGTGTCTACAGCAGATGGGCTTCATGCAGGATCGATTGAAGG
TCACCGAGGAGGAGCTGGAGGAAATGAGGCACCGGTATGCAGTCGCGGTG
GGTGGGGAGAAGGGGGAGGCGGAGAAGGAGCGTCTGAGGAAGGAGTGCGG
GAAGTGGAAGGGAAAGGTAGAGAAGCTGCAGGAGGAGCTGGGGCGGAAGA
CGGGGAGGGTGGGGGTATTGGAGGAGGATTTACACGTGGTGTTAAGGGAG
AAGGAGGAGTTGAAGACGAGGATGGAGGGCTTGGCGCCCAAGCTGAGTGC
GGCAAGAGCTGAAGTGGGGAGGCTCAAGCAACGGCTCATGTACCTAGGAG
GAGAGGGAGCAGGAGAGAAAGGGCAGCAGCAGCAGCAGCAGCAGCAGCCG
GGGGCCGAGGATGAAATTCGTCGGTTGAAATCGCATGTGATTTCGTTGGA
ACACGCCCTGAAGGATGCCCGAGGAGGAGGGAGGGAAGGAGGGAGGGAGG
GAGGGAAGGAGGAAGGGGGGGAGGAGGGGTCGACTTCGACGCTGGAGGAG
GACCGACGGCGGTTGCTGTCTTTGGTGGCTTCTGCGAATGCACGAATCAA
TGCCTTGGAAGCCGAGAGAGGGCAGGAAAGCGGACAGGGAAGGAGGGAGG
GCGAGGAGGAAGGATGGGAAGACCGAGCAGAGGCATTGGACCGCGCGCGA
CGGGAGGTATTGCTACTGCAGACGGCACAGACGGCGCAGCGACAAGAGTT
GGAGGCGGCATTAAGGGAGGCAGTCAGGGAGAAGGATTCACATGAAGAGC
TGCAGGCGAGATTTGATGTAATGCGCACCCAGCTGGTGCAGAAAGAGGAG
CAGGTGCAGCAGTTGAAGGCGCTTTTCACTCAATTGCATTTGGGGAGAGA
CCAGATTAATGTGAGGCTGCAACAGTCCTATGTTGAGGTGAGCGAGGCGG
AGGAGCGGGAGAGGGGAGCAGTAGAGAGGACGAGAAGAATGGAAAAAAGG
GTTGAGGAGAAGGAGGAGGAGGTGGAGAGACTCCAGCGTGTGGTTAGGGA
GCTGGACGAGGAGAGAGATGCGTTGCAGGCGGCGCTGGACCAGAAGGAGG
AGGAAGGGGTCGTGTTCAAGAGGGAGCAGGCACAGTATGAGAGGACTGTC
AGGAGACTGCAAGCCGACCTGGAGGAGGAGAGTAGGTTGAAGGAGGGGGC
GAGGGAGGAGCTGGCAGTGAGGGAGAGGGAGGGGAGGGCCATGCAACGCC
GGATGGAGGGGGTGGTGTTTGAGGCGGGGGAGGCGAAAAATATGGTGCAC
AGCCGCTTGTTGGAAGTGAGGGCCTTGAGGGACGATCTGTTGATCATGAC
GAGGGAGGCGCAGGCCACTCAGGGGGAGCTGGGTAGGGTGGGGAGGGAGA
GGGAGGAATACAGGAGGGAGATGGAGGAGGCCAGGGAGCGCGCGGAGGAG
GTGGAGGGGCTATTGAGGGGGTTGGAGGCGGAGAGGAATGACTTGCGGGC
GAGTTACAGGGTAGTACAGGAGGAGGTGGAGCGTCTGACGTACACACTCA
ATGAGATGGGGAGGGCGCAGAGGGAGCAACAGATGGCGCTGGGGCAGACT
CGGGCGGCCTTGTTGGCGACGGAGCGGAAGTTACAGCAGCAGAAGCAGCA
GCAGAAGCAGCAGCAGAAGCAGCAGCAACAGCACCAACAACAACAGGAGA
GGACGTCGACTGTAGCAACAGCAGCAGCAAATGTGATGACAGCAGGAACA
GATGGAGTGGGAGGGATTGAGGAAAGGGAAGGGGGTCGACGCTTCATGGA
TTATCGAGCGGCGTCCAGCACGAGGGATGGAGGGAGGGAGAGAGGGAAGC
CGGATGCGATCGCACGGGCAGTGACAGCGGAGACAGAGAGGGATGGGTTG
AGCCGGTTGTTGAAAGAAGAGAGGGTGCATGTGACGGAATTGGAAAAGAT
CATCCAGGAGGCGCGGACACGGGAGGTGATGCAAGCGAGAGAGATGACGA
GGTTGATGCAGTCGAATATAGAGATGAGGGAGGCACTGAGGCGTCAAGGA
AGGGGGGAAGGGAGGGAAGGAGGGAGGAGTGTGGCGGGTGGAGGAGGGGA
GGGAGGGGGCAGGGGGGAGCCAAGCGGCTTCGTTTCGTTGCGGCATTCGG
CGGTGAGGAGCGAGAGTGGGAGCGAAGGAGGGAGGGAGGGAGGGAGGGGA
CTCTCGGTGACGCTAGATGAGTCGCAGCAGCCCTCTTCTTTTCTTTCACT
CTCACCAGACCTACCAAAAAGGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACGACAAACATCTCTCTCAT
CATCATCATCAGCAGCAGCAGCAGTATATGAGGGCGGCGCCTGGGGATGA
CGAGGAGGAAGAAGAAAAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGGACGGGAAGAAGTGGGGCAGGTTGGATTGGAAGGG
CAGTATGCCCCTGATGTTTCGCCTTATCGTCGCTTTCAGCAGCAGCTTTC
GCAGCAAACGCCATTCCTTCGGGATTACCGGCAGCAGCAATACCAACCGC
AGCGGCAGCGCTTAGATAGGGAAGTGGAGGAGGAAGGGGGCGAGGATGAG
GAGGAAGAGCAGGAGGTGTCGGTATCGAGCCACGATATGTGA

protein sequence of NO01G01060.1

>NO01G01060.1-protein ID=NO01G01060.1-protein|Name=NO01G01060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1238bp
MPPASSAVFRGSSSGGTTAVDISGMEEGEGAPMHRRLHTLQSKLLVLGYN
EHVGSESVELVERLFEDLVMTSESYERMQSREDRVSHDLALAQAQHLPLR
KTVSRLTRENNLLHTQLLRAADIEDGRAVAWKKDMGAMRADLLATQQQLQ
EKERRWREERRRVKALERELRRLVATGEAKGVEFDTPILLDDEEVEEERK
GGEEEEEEEEEENRVELIHALERRVVEVENENEILREEGGRIRRALQERD
DEITRLGNMIEEEREGGREGGRGGAARQANARILEQLDSQVDFLNSQLAA
KEAQLQALGLGGEGGGQEDVIRGGQEVRRVLRAQVQQLQKEKSGCLQQMG
FMQDRLKVTEEELEEMRHRYAVAVGGEKGEAEKERLRKECGKWKGKVEKL
QEELGRKTGRVGVLEEDLHVVLREKEELKTRMEGLAPKLSAARAEVGRLK
QRLMYLGGEGAGEKGQQQQQQQQPGAEDEIRRLKSHVISLEHALKDARGG
GREGGREGGKEEGGEEGSTSTLEEDRRRLLSLVASANARINALEAERGQE
SGQGRREGEEEGWEDRAEALDRARREVLLLQTAQTAQRQELEAALREAVR
EKDSHEELQARFDVMRTQLVQKEEQVQQLKALFTQLHLGRDQINVRLQQS
YVEVSEAEERERGAVERTRRMEKRVEEKEEEVERLQRVVRELDEERDALQ
AALDQKEEEGVVFKREQAQYERTVRRLQADLEEESRLKEGAREELAVRER
EGRAMQRRMEGVVFEAGEAKNMVHSRLLEVRALRDDLLIMTREAQATQGE
LGRVGREREEYRREMEEARERAEEVEGLLRGLEAERNDLRASYRVVQEEV
ERLTYTLNEMGRAQREQQMALGQTRAALLATERKLQQQKQQQKQQQKQQQ
QHQQQQERTSTVATAAANVMTAGTDGVGGIEEREGGRRFMDYRAASSTRD
GGRERGKPDAIARAVTAETERDGLSRLLKEERVHVTELEKIIQEARTREV
MQAREMTRLMQSNIEMREALRRQGRGEGREGGRSVAGGGGEGGGRGEPSG
FVSLRHSAVRSESGSEGGREGGRGLSVTLDESQQPSSFLSLSPDLPKRQQ
QQQQQQQQQQQQQQQQQHDKHLSHHHHQQQQQYMRAAPGDDEEEEEKEEE
EEEEEEEEEEEEGREEVGQVGLEGQYAPDVSPYRRFQQQLSQQTPFLRDY
RQQQYQPQRQRLDREVEEEGGEDEEEEQEVSVSSHDM*

Synonyms

Publications