NO01G00970, NO01G00970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00970 vs. NCBI_GenBank
Match: ETL25510.1 (hypothetical protein L916_20621, partial [Phytophthora parasitica]) HSP 1 Score: 94.7 bits (234), Expect = 1.800e-15 Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 0 Query: 952 GTKIEARYKGRDRWFTGIVARTHQNEHTYDIHYDDGDEETHVPQEMVRPRGASTALQLQRPS-------SVESSSSVSSVLSLV-----FQKGDRVEARYQGRGTFYSGVIAAVHASDGSYEIHYDDGDVENQVVAAMVRPV 1082 G K+EA+YKG+ +++ G+++R N TYDI YDDG++ET V E++R G S SV+ S S + V F+ G RVEARY G+ ++ G I+ V+ SDG+Y I YDDGD EN+V + +RP+ Sbjct: 12 GDKVEAQYKGKSKFYPGVISRCRLN-GTYDIDYDDGEKETGVAAELIRLLGKKGGGDTDDDSKQNFYVVSVKHESKAESKGAHVEPGQTFRVGTRVEARYMGKDKYFKGTISRVN-SDGTYVIEYDDGDKENRVPVSSIRPL 151
BLAST of NO01G00970 vs. NCBI_GenBank
Match: ETL78724.1 (hypothetical protein L917_20483, partial [Phytophthora parasitica]) HSP 1 Score: 94.7 bits (234), Expect = 1.800e-15 Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 0 Query: 952 GTKIEARYKGRDRWFTGIVARTHQNEHTYDIHYDDGDEETHVPQEMVRPRGASTALQLQRPS-------SVESSSSVSSVLSLV-----FQKGDRVEARYQGRGTFYSGVIAAVHASDGSYEIHYDDGDVENQVVAAMVRPV 1082 G K+EA+YKG+ +++ G+++R N TYDI YDDG++ET V E++R G S SV+ S S + V F+ G RVEARY G+ ++ G I+ V+ SDG+Y I YDDGD EN+V + +RP+ Sbjct: 13 GDKVEAQYKGKSKFYPGVISRCRLN-GTYDIDYDDGEKETGVAAELIRLLGKKGGGDTDDDSKQNFYVVSVKHESKAESKGAHVEPGQTFRVGTRVEARYMGKDKYFKGTISRVN-SDGTYVIEYDDGDKENRVPVSSIRPL 152
BLAST of NO01G00970 vs. NCBI_GenBank
Match: XP_009846837.1 (hypothetical protein H257_19388, partial [Aphanomyces astaci] >ETV63679.1 hypothetical protein H257_19388, partial [Aphanomyces astaci]) HSP 1 Score: 94.0 bits (232), Expect = 3.100e-15 Identity = 49/125 (39.20%), Postives = 78/125 (62.40%), Query Frame = 0 Query: 955 IEARYKGRDRWFTGIVARTHQNEHTYDIHYDDGDEETHVPQEMVRPRGASTALQLQRPSSVESSSSVSSVLSLVFQKGDRVEARYQGRGTFYSGVIAAVHASDGSYEIHYDDGDVENQVVAAMVR 1080 +EA+YKG+ +++ G+++R N TYDI YDDG++ET V E++R + S+ P S SV F++G++VEA+Y+G+ FY GVIA +G+Y+I YDDG+ E +V ++R Sbjct: 504 VEAQYKGKAKFYPGVISRARLN-GTYDIDYDDGEKETGVAAELIRSKDKSS------PKKKSSDDSVEXXXPKKFKEGEKVEAQYKGKSKFYPGVIARARL-NGTYDIDYDDGEKEKEVDGKLIR 620
BLAST of NO01G00970 vs. NCBI_GenBank
Match: XP_009834118.1 (hypothetical protein H257_09572 [Aphanomyces astaci] >ETV76573.1 hypothetical protein H257_09572 [Aphanomyces astaci]) HSP 1 Score: 94.0 bits (232), Expect = 3.100e-15 Identity = 53/129 (41.09%), Postives = 74/129 (57.36%), Query Frame = 0 Query: 951 MGTKIEARYKGRDRWFTGIVARTHQNEHTYDIHYDDGDEETHVPQEMVRPRGASTALQLQRPSSVESSSSVSSVLSLVFQKGDRVEARYQGRGTFYSGVIAAVHASDGSYEIHYDDGDVENQVVAAMVR 1080 +G K+EARYK R +++ G VAR N TYD+ YDDG+ ET V ++M+R G +RP F++GD V+A+Y+G FY+G I DGSY+I YDDGD+E V A ++R Sbjct: 877 VGQKVEARYKRRQKYYKGKVARARSN-GTYDVEYDDGERETGVDKDMIRALGDMD----ERPQ---------------FEEGDLVQAQYEGNTRFYNGTILRCRL-DGSYDIKYDDGDIETFVAAELIR 984
BLAST of NO01G00970 vs. NCBI_GenBank
Match: POM77784.1 (hypothetical protein PHPALM_4774 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 93.6 bits (231), Expect = 4.100e-15 Identity = 52/132 (39.39%), Postives = 78/132 (59.09%), Query Frame = 0 Query: 952 GTKIEARYKGRDRWFTGIVARTHQNEHTYDIHYDDGDEETHVPQEMVRPRGASTALQLQRPSSVESSSSVSSVLSLVFQKGDRVEARYQGRGTFYSGVIAAVHASDGSYEIHYDDGDVENQVVAAMVRPVGG 1084 G K+EA+YKG+ R++ G+++R N TYDI YDDG++ET V E++R G + S F++GD+VEA+Y+G+ FY GVI+ +G+Y+I YDDG+ E V A +VR + G Sbjct: 88 GDKVEAQYKGKSRFYPGVISRCRLN-GTYDIDYDDGEKETGVAAELIRLVGKKS-----------GGDSDDDPKQKKFKEGDKVEAQYKGKSRFYPGVISRCRL-NGTYDIDYDDGEKETGVAAELVRLMNG 206
BLAST of NO01G00970 vs. NCBI_GenBank
Match: GBG28986.1 (Cytidine deaminase [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 93.6 bits (231), Expect = 4.100e-15 Identity = 51/132 (38.64%), Postives = 72/132 (54.55%), Query Frame = 0 Query: 952 GTKIEARYKGRDRWFTGIVARTHQNEHTYDIHYDDGDEETHVPQEMVRPRGASTALQLQRPSSVESSSSVSSVLSLVFQKGDRVEARYQGRGTFYSGVIAAVHASDGSYEIHYDDGDVENQVVAAMVRPVGG 1084 G ++EARYKG +W+ G + R + + +Y+I YDDGD+E V VR G V ++GDRVEARY+G +Y G I+ ++A DGSY I YDDGD E ++ + VR +GG Sbjct: 1574 GDRVEARYKGGAKWYKGKITRVNA-DGSYNIDYDDGDQERRVASSKVRKLGGGAGRGGSPRRGGRDEFDTEDDAGGVLREGDRVEARYKGGSKYYKGKISRINA-DGSYNIDYDDGDQERRIAPSKVRKLGG 1703
BLAST of NO01G00970 vs. NCBI_GenBank
Match: XP_009533852.1 (hypothetical protein PHYSODRAFT_459935, partial [Phytophthora sojae] >EGZ11107.1 hypothetical protein PHYSODRAFT_459935, partial [Phytophthora sojae]) HSP 1 Score: 92.8 bits (229), Expect = 6.900e-15 Identity = 51/133 (38.35%), Postives = 79/133 (59.40%), Query Frame = 0 Query: 952 GTKIEARYKGRDRWFTGIVARTHQNEHTYDIHYDDGDEETHVPQEMVRPRGASTALQLQRPSSVESSSSVSSVLSLVFQKGDRVEARYQGRGTFYSGVIAAVHASDGSYEIHYDDGDVENQVVAAMVRPVGGK 1085 G K+EA+YKG+ +++ G+++R N TYDI YDDG++ET V E++R G S + F++GD+VEA+Y+G+ FY GVI+ +G+Y+I YDDG+ E V A ++R +G K Sbjct: 903 GDKVEAQYKGKSKFYPGVISRCRLN-GTYDIDYDDGEKETGVAAELIRLLGKK-----------GGGDSDDDPKARKFKEGDKVEAQYKGKSKFYPGVISRCRL-NGTYDIDYDDGEKETGVAAELIRLLGKK 1022
BLAST of NO01G00970 vs. NCBI_GenBank
Match: XP_008873603.1 (hypothetical protein H310_09336 [Aphanomyces invadans] >ETV98042.1 hypothetical protein H310_09336 [Aphanomyces invadans]) HSP 1 Score: 92.8 bits (229), Expect = 6.900e-15 Identity = 53/129 (41.09%), Postives = 74/129 (57.36%), Query Frame = 0 Query: 952 GTKIEARYKGRDRWFTGIVARTHQNEHTYDIHYDDGDEETHVPQEMVRPRGASTALQLQRPSSVESSSSVSSVLSLVFQKGDRVEARYQGRGTFYSGVIAAVHASDGSYEIHYDDGDVENQVVAAMVRP 1081 G +EAR+ G D+++ G +AR H + + DI Y DGD ET VP VR + Q PS F+ GD VEAR+ G+ ++ G IA VH SDG+ +IHY DGD E++V+A++VRP Sbjct: 1078 GQAVEARFGGNDKFYPGTIARVH-GDGSVDIEYADGDRETRVPSRYVRVSASKAKTQ---PS---------------FEAGDAVEARFGGQDKYFPGKIARVH-SDGTVDIHYADGDKESRVIASLVRP 1186
BLAST of NO01G00970 vs. NCBI_GenBank
Match: OQR89473.1 (hypothetical protein THRCLA_22688, partial [Thraustotheca clavata]) HSP 1 Score: 92.8 bits (229), Expect = 6.900e-15 Identity = 52/131 (39.69%), Postives = 80/131 (61.07%), Query Frame = 0 Query: 949 LDMGTKIEARYKGRDRWFTGIVARTHQNEHTYDIHYDDGDEETHVPQEMVRPRGASTALQLQRPSSVESSSSVSSVLSLVFQKGDRVEARYQGRGTFYSGVIAAVHASDGSYEIHYDDGDVENQVVAAMVR 1080 +++GTK+EA+YKGR ++ G +AR H + TYDI YDDG+ E VP+++VR + S P + ++ G +VEARY+G+ +Y+G IA H DG+Y+I YDDG+VE +V ++R Sbjct: 510 IEIGTKVEAKYKGR-TYYPGKIARAH-TDGTYDIDYDDGEVEKRVPRDLVRVKETS-------PKKTKDTA---------ISAGTKVEARYKGKTKYYAGKIAKAH-MDGTYDIDYDDGEVEKRVEKDLIR 621
BLAST of NO01G00970 vs. NCBI_GenBank
Match: XP_008608688.1 (hypothetical protein SDRG_04782 [Saprolegnia diclina VS20] >EQC37755.1 hypothetical protein SDRG_04782 [Saprolegnia diclina VS20]) HSP 1 Score: 92.4 bits (228), Expect = 9.100e-15 Identity = 50/132 (37.88%), Postives = 77/132 (58.33%), Query Frame = 0 Query: 954 KIEARYKGRDRWFTGIVARTHQNEHTYDIHYDDGDEETHVPQEMVRPRGASTALQLQRPSSVESSSSVSSVLSLVFQKGDRVEARYQGRGTFYSGVIAAVHASDGSYEIHYDDGDVENQVVAAMVRPVGGKS 1086 KIEA+YKG+D+++ G++AR N TYDI YDDG++ET V ++VR + S +++GD++EA+Y+G+ FY GVI+ +G+Y+I YDDG+ E V ++R GG S Sbjct: 724 KIEAQYKGKDKFYPGVIARARLN-GTYDIDYDDGEKETMVKADLVRLKEGSXXXXXXXXXXXXXXXXXXKPKRGKYKEGDKIEAQYKGKDKFYPGVISRARV-NGTYDIDYDDGEKETMVKTDLIRLKGGTS 853 The following BLAST results are available for this feature:
BLAST of NO01G00970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00970 ID=NO01G00970|Name=NO01G00970|organism=Nannochloropsis oceanica|type=gene|length=3258bpback to top protein sequence of NO01G00970.1 >NO01G00970.1-protein ID=NO01G00970.1-protein|Name=NO01G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1086bpback to top Synonyms
Publications
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