NO01G00940, NO01G00940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00940 vs. NCBI_GenBank
Match: CBN75500.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 289.3 bits (739), Expect = 7.800e-75 Identity = 137/167 (82.04%), Postives = 151/167 (90.42%), Query Frame = 0 Query: 1 MSDYATELLRRQLHELNKNPPEGVSVGLV-DDSLFEWELLLVGPADTLYEGGFFKARLAFPTDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNDQETADERWRPILGVEAIIVSVISMLSDPNDESPANIDAAVQFRNDRAGFKKRVRAVVRKSQEEL 167 MSDYATELLRRQL ELNKNPPEGVSVGL DD++F WELL+VGPADTLYEGGFFKA+L FP DFPN PPTMTF +EM+HPNVY DGRVCISILHPPGED+FN+QETA+ERWRPILGVE IIVSV+SMLSDPNDESPANIDAAV +RNDR FKK+ R +VRKSQ+ L Sbjct: 1 MSDYATELLRRQLQELNKNPPEGVSVGLANDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFISEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVRKSQDAL 167
BLAST of NO01G00940 vs. NCBI_GenBank
Match: GAX14973.1 (ubiquitin-conjugating enzyme E2 G1 [Fistulifera solaris]) HSP 1 Score: 280.8 bits (717), Expect = 2.800e-72 Identity = 133/166 (80.12%), Postives = 148/166 (89.16%), Query Frame = 0 Query: 1 MSDYATELLRRQLHELNKNPPEGVSVGLVDDS-LFEWELLLVGPADTLYEGGFFKARLAFPTDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNDQETADERWRPILGVEAIIVSVISMLSDPNDESPANIDAAVQFRNDRAGFKKRVRAVVRKSQEE 166 MSDY TELLRRQL +L KNP + VSVGLVDDS ++EWE+L++GP TLYEGGFFKA+L FP DFPNMPPTMTF +EMWHPNVY DGRVCISILHPPGED FN QE+A+ERWRPILGVE I+VSVISMLSDPNDESPAN+DAAV +RNDRA FKK+VR VVRKSQEE Sbjct: 1 MSDYGTELLRRQLTDLAKNPIDLVSVGLVDDSNVYEWEILIMGPDGTLYEGGFFKAKLVFPPDFPNMPPTMTFTSEMWHPNVYTDGRVCISILHPPGEDEFNQQESAEERWRPILGVEQILVSVISMLSDPNDESPANLDAAVMWRNDRAAFKKKVRQVVRKSQEE 166
BLAST of NO01G00940 vs. NCBI_GenBank
Match: XP_002287584.1 (ubiquitin conjugating enzyme [Thalassiosira pseudonana CCMP1335] >EED95027.1 ubiquitin conjugating enzyme [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 278.9 bits (712), Expect = 1.100e-71 Identity = 130/166 (78.31%), Postives = 149/166 (89.76%), Query Frame = 0 Query: 1 MSDYATELLRRQLHELNKNPPEGVSVGLVDDS-LFEWELLLVGPADTLYEGGFFKARLAFPTDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNDQETADERWRPILGVEAIIVSVISMLSDPNDESPANIDAAVQFRNDRAGFKKRVRAVVRKSQEE 166 MSDY TELL+RQL+EL KNP + VSVGL DDS +++WE+L++GP TLYEGGFFKARL FP DFPNMPPTMTF ++MWHPNVY+DG+VCISILHPPGED N QE+ADERWRPILGVEAI++SVISMLSDPNDESPAN+DAAVQ+RND AGFKK+VR VRKSQEE Sbjct: 1 MSDYGTELLKRQLNELAKNPIDLVSVGLTDDSNVYDWEILIMGPDGTLYEGGFFKARLVFPPDFPNMPPTMTFTSQMWHPNVYQDGKVCISILHPPGEDAMNSQESADERWRPILGVEAILMSVISMLSDPNDESPANLDAAVQWRNDMAGFKKKVRQCVRKSQEE 166
BLAST of NO01G00940 vs. NCBI_GenBank
Match: XP_002181167.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47090.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 278.5 bits (711), Expect = 1.400e-71 Identity = 130/166 (78.31%), Postives = 149/166 (89.76%), Query Frame = 0 Query: 1 MSDYATELLRRQLHELNKNPPEGVSVGLVDDS-LFEWELLLVGPADTLYEGGFFKARLAFPTDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNDQETADERWRPILGVEAIIVSVISMLSDPNDESPANIDAAVQFRNDRAGFKKRVRAVVRKSQEE 166 MSDY TELLRRQL++L KNP + VSVGLVDDS L++WE+L++GP TL+EGGFFKARL FP DFPNMPPTMTF +EMWHPNVYEDG+VCISILHPPGED FN QETA+ERWRPILGVE I+VSVISMLSDPNDESPAN+DAAV +RND+ FKK+VR +VRKSQE+ Sbjct: 1 MSDYGTELLRRQLNDLAKNPIDLVSVGLVDDSNLYDWEILVMGPDGTLFEGGFFKARLVFPHDFPNMPPTMTFTSEMWHPNVYEDGKVCISILHPPGEDAFNSQETAEERWRPILGVEQILVSVISMLSDPNDESPANLDAAVMWRNDKPAFKKKVRQIVRKSQED 166
BLAST of NO01G00940 vs. NCBI_GenBank
Match: XP_009526887.1 (hypothetical protein PHYSODRAFT_354622 [Phytophthora sojae] >EGZ17829.1 hypothetical protein PHYSODRAFT_354622 [Phytophthora sojae]) HSP 1 Score: 275.0 bits (702), Expect = 1.500e-70 Identity = 127/166 (76.51%), Postives = 148/166 (89.16%), Query Frame = 0 Query: 2 SDYATELLRRQLHELNKNPPEGVSVGLVDD-SLFEWELLLVGPADTLYEGGFFKARLAFPTDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNDQETADERWRPILGVEAIIVSVISMLSDPNDESPANIDAAVQFRNDRAGFKKRVRAVVRKSQEEL 167 +DYA ELLRRQ E+++NPPEGVSVGL DD ++F WE+LLVGP DTLYEGGFFKA L FP+DFPNMPP MTF++EMWHPNVY +G VCISILHPPGED+ N QETADERWRPILGVE+I+VSVISMLSDPND+SPANIDAAV++RND+ GFKK R +VRKSQE++ Sbjct: 5 TDYAKELLRRQFLEMSRNPPEGVSVGLGDDENIFNWEILLVGPPDTLYEGGFFKAVLEFPSDFPNMPPKMTFKSEMWHPNVYPNGVVCISILHPPGEDQLNQQETADERWRPILGVESILVSVISMLSDPNDDSPANIDAAVEWRNDKDGFKKHCRRIVRKSQEDI 170
BLAST of NO01G00940 vs. NCBI_GenBank
Match: XP_008902399.1 (hypothetical protein PPTG_09258 [Phytophthora parasitica INRA-310] >ETI51692.1 hypothetical protein F443_05040 [Phytophthora parasitica P1569] >ETK91556.1 hypothetical protein L915_04912 [Phytophthora parasitica] >ETL44966.1 hypothetical protein L916_04858 [Phytophthora parasitica] >ETL98123.1 hypothetical protein L917_04758 [Phytophthora parasitica] >ETM51325.1 hypothetical protein L914_04862 [Phytophthora parasitica] >ETN12427.1 hypothetical protein PPTG_09258 [Phytophthora parasitica INRA-310] >ETO80445.1 hypothetical protein F444_05090 [Phytophthora parasitica P1976] >ETP49354.1 hypothetical protein F442_05107 [Phytophthora parasitica P10297] >KUF90545.1 Ubiquitin-conjugating enzyme E2 G1 [Phytophthora nicotianae]) HSP 1 Score: 274.6 bits (701), Expect = 2.000e-70 Identity = 127/166 (76.51%), Postives = 148/166 (89.16%), Query Frame = 0 Query: 2 SDYATELLRRQLHELNKNPPEGVSVGLVDD-SLFEWELLLVGPADTLYEGGFFKARLAFPTDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNDQETADERWRPILGVEAIIVSVISMLSDPNDESPANIDAAVQFRNDRAGFKKRVRAVVRKSQEEL 167 +DYA ELLRRQ E+++NPPEGVSVGL DD ++F WE+LLVGP DTLYEGGFFKA L FP+DFPNMPP MTF++EMWHPNVY +G VCISILHPPGED+ N QETADERWRPILGVE+I+VSVISMLSDPND+SPANIDAAV++R D+ GFKKR R +VRKSQE++ Sbjct: 5 TDYAKELLRRQFLEMSRNPPEGVSVGLGDDENIFNWEILLVGPPDTLYEGGFFKAVLEFPSDFPNMPPKMTFKSEMWHPNVYPNGVVCISILHPPGEDQLNQQETADERWRPILGVESILVSVISMLSDPNDDSPANIDAAVEWRTDKDGFKKRCRRIVRKSQEDI 170
BLAST of NO01G00940 vs. NCBI_GenBank
Match: OQR93502.1 (ubiquitin-conjugating enzyme E2 [Thraustotheca clavata]) HSP 1 Score: 274.2 bits (700), Expect = 2.600e-70 Identity = 128/165 (77.58%), Postives = 147/165 (89.09%), Query Frame = 0 Query: 3 DYATELLRRQLHELNKNPPEGVSVGLVDD-SLFEWELLLVGPADTLYEGGFFKARLAFPTDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNDQETADERWRPILGVEAIIVSVISMLSDPNDESPANIDAAVQFRNDRAGFKKRVRAVVRKSQEEL 167 DY ELLRRQL EL++NPPEGVSVGL DD +LF WE++LVGP DTLYEGGFF+ARL FP DFPNMPP MTF +EMWHPNVY +G VCISILHPPGED+ N QE+ADERWRPILGVEAI+VSVISMLSDPND+SPANIDAAV++RN++ GFKKR R +VRKSQE++ Sbjct: 2 DYGRELLRRQLTELSRNPPEGVSVGLGDDENLFHWEIMLVGPPDTLYEGGFFRARLEFPNDFPNMPPKMTFISEMWHPNVYPNGVVCISILHPPGEDQMNAQESADERWRPILGVEAILVSVISMLSDPNDDSPANIDAAVEWRNNKDGFKKRCRRIVRKSQEDI 166
BLAST of NO01G00940 vs. NCBI_GenBank
Match: ETP21477.1 (hypothetical protein F441_05047 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 273.9 bits (699), Expect = 3.400e-70 Identity = 127/166 (76.51%), Postives = 148/166 (89.16%), Query Frame = 0 Query: 2 SDYATELLRRQLHELNKNPPEGVSVGLVDD-SLFEWELLLVGPADTLYEGGFFKARLAFPTDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNDQETADERWRPILGVEAIIVSVISMLSDPNDESPANIDAAVQFRNDRAGFKKRVRAVVRKSQEEL 167 +DYA ELLRRQ E+++NPPEGVSVGL DD ++F WE+LLVGP DTLYEGGFFKA L FP+DFPNMPP MTF++EMWHPNVY +G VCISILHPPGED+ N QETADERWRPILGVE+I+VSVISMLSDPND+SPANIDAAV++R D+ GFKKR R +VRKSQE++ Sbjct: 5 TDYAKELLRRQFLEMSRNPPEGVSVGLGDDENIFNWEILLVGPPDTLYEGGFFKAVLEFPSDFPNMPPKMTFKSEMWHPNVYPNGVVCISILHPPGEDQLNQQETADERWRPILGVESILVSVISMLSDPNDDSPANIDAAVEWRADKDGFKKRCRRIVRKSQEDI 170
BLAST of NO01G00940 vs. NCBI_GenBank
Match: XP_002899443.1 (ubiquitin-conjugating enzyme E2, putative [Phytophthora infestans T30-4] >EEY61803.1 ubiquitin-conjugating enzyme E2, putative [Phytophthora infestans T30-4]) HSP 1 Score: 273.1 bits (697), Expect = 5.800e-70 Identity = 126/166 (75.90%), Postives = 148/166 (89.16%), Query Frame = 0 Query: 2 SDYATELLRRQLHELNKNPPEGVSVGLVDD-SLFEWELLLVGPADTLYEGGFFKARLAFPTDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNDQETADERWRPILGVEAIIVSVISMLSDPNDESPANIDAAVQFRNDRAGFKKRVRAVVRKSQEEL 167 +DYA ELLRRQ E+++NPPEGVSVGL DD ++F WE+LLVGP DTLYEGGFFKA L FP+DFPNMPP MTF++EMWHPNVY +G VCISILHPPGED+ N QETADERWRPILGVE+I+VSVISMLSDPND+SPANIDAAV++R+D+ GFKK R +VRKSQE++ Sbjct: 5 TDYAKELLRRQFLEMSRNPPEGVSVGLGDDENIFNWEILLVGPPDTLYEGGFFKAVLEFPSDFPNMPPKMTFKSEMWHPNVYPNGVVCISILHPPGEDQLNQQETADERWRPILGVESILVSVISMLSDPNDDSPANIDAAVEWRSDKDGFKKHCRRIVRKSQEDI 170
BLAST of NO01G00940 vs. NCBI_GenBank
Match: OQR94224.1 (ubiquitin-conjugating enzyme E2 [Achlya hypogyna]) HSP 1 Score: 273.1 bits (697), Expect = 5.800e-70 Identity = 127/165 (76.97%), Postives = 147/165 (89.09%), Query Frame = 0 Query: 3 DYATELLRRQLHELNKNPPEGVSVGLVDD-SLFEWELLLVGPADTLYEGGFFKARLAFPTDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNDQETADERWRPILGVEAIIVSVISMLSDPNDESPANIDAAVQFRNDRAGFKKRVRAVVRKSQEEL 167 DY ELLRRQL EL++NPPEGVSVGL DD ++F W+++LVGP DTLYEGGFF+ARL FP+DFPNMPP MTF +EMWHPNVY +G VCISILHPPGED+ N QE+ADERWRPILGVEAI+VSVISMLSDPND+SPANIDAAV++RND+ FKKR R VVRKSQE++ Sbjct: 2 DYGRELLRRQLTELSRNPPEGVSVGLGDDENIFHWDIMLVGPPDTLYEGGFFRARLEFPSDFPNMPPKMTFISEMWHPNVYPNGVVCISILHPPGEDQMNAQESADERWRPILGVEAILVSVISMLSDPNDDSPANIDAAVEWRNDKEAFKKRCRRVVRKSQEDI 166 The following BLAST results are available for this feature:
BLAST of NO01G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00940 ID=NO01G00940|Name=NO01G00940|organism=Nannochloropsis oceanica|type=gene|length=2282bpback to top protein sequence of NO01G00940.1 >NO01G00940.1-protein ID=NO01G00940.1-protein|Name=NO01G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=167bpback to top Synonyms
Publications
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