NO01G00930, NO01G00930 (gene) Nannochloropsis oceanica

Overview
NameNO01G00930
Unique NameNO01G00930
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2697
Alignment locationchr1:232886..235582 +

Link to JBrowse

Properties
Property NameValue
DescriptionTyrosine-protein phosphatase family, C-terminal domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:232886..235582 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029021Prot-tyrosine_phosphatase-like
IPR026893Tyr/Ser_Pase_IphP-type
Homology
BLAST of NO01G00930 vs. NCBI_GenBank
Match: XP_016758042.1 (hypothetical protein SEPMUDRAFT_70870 [Sphaerulina musiva SO2202] >EMF09921.1 hypothetical protein SEPMUDRAFT_70870 [Sphaerulina musiva SO2202])

HSP 1 Score: 122.5 bits (306), Expect = 3.200e-24
Identity = 95/300 (31.67%), Postives = 150/300 (50.00%), Query Frame = 0
Query:  127 QKVKNIRDLSSVKGSG-IQPGRIYRTGYLSKASPEDIKFIREKVNFKTLIDLRSEKELGMDDQMN-SSVYEGYDTWSWAKGAEKVRIDSPHSSPED--QKKALQRHLISVIDEGVYQRGVFKRLAKRKKAAALFLITGGAVSKRARRRARSIF-LNYINDAGLPLLNDLLLNYSGAAIKRVLELLSDKERYPIALYCTAGKDRTGLVILLLLASLGVDPAAIAEDYVLSDSAYADLSDEKAMVGALEQNNLDPAKFLRAPRSVIEHTLAYIQKKFGSIEGYLDQIGFTEAQRSRLKAALR 422
            QKV N RD+SS  GS  + PG +YR+     A+P D   +  ++  KT+IDLRS+ E     + N S +    D        +  R  + H+ P++      +Q  LI+  +   Y   + ++L+    A      T G      R  A SI   N +   GL  L    L+     +K V ++L+ +E YP+ ++CT GKDRTGLVILL+L  LG D  AI +DY+LS+   A  +D+   + A+ +  L   +F   PR  +E  +  +++KFG +E YL+  G    Q+ +++  LR
Sbjct:   10 QKVPNFRDVSSSTGSQYLTPGLLYRSAAPDDATPVDRSRLSTEIGLKTIIDLRSDTEHHEVSRKNLSKIPPALDPPGKPHNHKGGRGHTAHNDPQNPLHVPGVQYELIN-FNGSAYSSNLIRQLSYLNMAKLFTWYTLG-----WRTEAISILGTNVMQKRGLVGLAQDSLSLCQKEVKLVFDILARQENYPLMVHCTQGKDRTGLVILLVLLLLGADQEAIEKDYLLSEDELA--NDKAERIRAIAKIGLG-EEFAGCPRDWVEQVVLTVKQKFGGVEKYLESCGVDAEQQRKIRDILR 300          
BLAST of NO01G00930 vs. NCBI_GenBank
Match: PSC68002.1 (tyrosine serine [Micractinium conductrix])

HSP 1 Score: 121.7 bits (304), Expect = 5.500e-24
Identity = 86/303 (28.38%), Postives = 152/303 (50.17%), Query Frame = 0
Query:  126 LQKVKNIRDLSSVKGSGIQPGRIYRTGYLSKASPEDIKFIREKVNFKTLIDLRSEKELGMDDQMNSSVYEG-YDTWSWAKGAEKVRIDSPHSSPEDQKKALQRHLISVIDEGVYQRGVFKRLAKRKKAAALFLITGGAVSKRARRRA-RSIFLNYINDAGLPLLNDLLLNYSGAAIKRVLELLSD--KERYPIALYCTAGKDRTGLVILLLLASLGVDPAAIAEDYVLSDSAYADLSDEKAMVGALEQNN----LDPAKFLRAPRSVIEHTLAYIQKKFGSIEGYLDQIGFTEAQRSRLKAAL 421
            L  + N RDL+      ++PGRI+R+G  + AS ED+  +R++++ + ++D RS +E G D   +  +  G   T+       +V +D   +      + +Q H +S+++     RG+  +L          L+  G    R    A R + +  +N  GL L+  +L++ + A + + L++++    +R P   +C  GKDRTGL+  L+LA+ G     I  DYV S   +      +  +G LE+ +    +D A F  AP   +   L Y ++ +GS+ GY++ IGFT  Q+ RL AA+
Sbjct:   25 LSHILNARDLAEASPK-LKPGRIFRSGSPAHASLEDVLLLRKQLHVQHMLDFRSPEEHGEDSAWSLMLSNGLIKTYDQQGNITQVSVDHNAALHGIDLEDIQLHRLSLLERRRVMRGMIGKLPWST------LLWAGWYKLRGDEEAMRDVLVPEVNKGGLLLIYQILVDTAQADLAKSLQIVTAALDQRQPCLFFCKLGKDRTGLMAALVLAACGASDEEIVADYVRSAGVH------QVALGGLEKQSDLKGMDEAVFSAAPPEAMRGLLDYCRQHWGSLRGYMEAIGFTRDQQERLAAAM 314          
BLAST of NO01G00930 vs. NCBI_GenBank
Match: XP_016608616.1 (hypothetical protein SPPG_03701 [Spizellomyces punctatus DAOM BR117] >KND00577.1 hypothetical protein SPPG_03701 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 121.3 bits (303), Expect = 7.100e-24
Identity = 94/312 (30.13%), Postives = 150/312 (48.08%), Query Frame = 0
Query:  127 QKVKNIRDL-----SSVKGSGIQPGRIYRTGYLSKASPEDIKFIREKVNFKTLIDLRSEKELGMDDQM-----------NSSVYEGYDTWSWAKGAEKVRIDSPHSSPEDQKKALQR--HLISVIDEGVYQRGVFKRLAKRKKAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGAAIKRVLELLSDKERYPIALYCTAGKDRTGLVILLLLASLGVDPAAIAEDYVLSDSAYADLSDEKAMVGALEQNNLDPAKFLRAPRSVIEHTLAYIQKKFGSIEGYLDQIGFTEAQRSRLKAAL 421
            Q V N RD+          S ++ G ++R+G L  A+ +D++ +  K   KT++DLRSE E  M + +            +++ E       A    K      HS  +   + +QR  + I+       +  V+K L  + K   + L+       +  R    +  + I   GL  LN   ++Y GA I + L LLS+   YP+ ++CT GKDRTGLVI L L    +  + I +DY  +    A   D   MV  + +  LDP+ F  AP +VI+ TL YI++K+GS E YL++ GF  A++ ++ A L
Sbjct:   72 QNVVNFRDVGRGFNEDSGKSYMKTGNLFRSGRLDDATTKDLELLTAKYGIKTVVDLRSETEGKMGEDLVNTFPASAINEQTNIAELIKVGDGAVVTAKAEPMQLHSDGDTGGEDVQRVTYYINFAGRKFRRHSVWKPLRLKTKLKVIALM----AMNQKPRVIELVGQSVIEPRGLLGLNKDFVDYCGAEIVQALRLLSNPAHYPLLVHCTQGKDRTGLVIALALRCAKIPESYIIKDYARTQEGLARQRD--VMVEEMRKTGLDPS-FCDAPPNVIKQTLEYIRQKYGSEEAYLEKWGFGWAEQKKVMACL 376          
BLAST of NO01G00930 vs. NCBI_GenBank
Match: ESK85139.1 (tyrosine serine protein [Moniliophthora roreri MCA 2997])

HSP 1 Score: 118.2 bits (295), Expect = 6.000e-23
Identity = 87/300 (29.00%), Postives = 143/300 (47.67%), Query Frame = 0
Query:  123 EIKLQKVKNIRDLSSVKGSGIQPGRIYRTGYLSKASPEDIKFIREKVNFKTLIDLRSEKELGMDDQMNSSVYEGYDTWSWAKGAEKVRIDSPHSSPEDQKKALQRHLISVIDEGVYQRGVFKRLAKRKKAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGAAIKRVLELLSDKERYPIALYCTAGKDRTGLVILLLLASLGVDPAAIAEDYVLS----DSAYADLSDEKAMVGALEQNNLDPAKFLRAPRSVIEHTLAYIQKKFGSIEGYLDQIGFTEAQRSRLKA 419
            ++ L+ + N RD+  +  + +  G +YR+G L +A+P DI  +  +   KT+IDLR++ E                     K  +K  I           + ++ H I       Y+  + K L   K    L L+    + +      R +  + +   GL  LN  +L Y  A I + LE+L +   YP+ ++CT GKDR+GL+++L+L +L V    I  DYVLS    D     + +E   +G  E        ++ AP SV++   AY+++++G  EGYLD IGF E +R+ LKA
Sbjct:    5 DVPLESIHNFRDVGHL--TSLPRGLLYRSGRLDEATPSDIHKLSSEYQIKTVIDLRTKSE-------------------HIKQEQKTGIAPRKQEERRPWETIRVHFIG----RRYEVQILKELGLVKAIWLLILM----ILQLRMAAIRVVGRDVLTPKGLEGLNRDMLIYCRAEILQALEILVNPSSYPVLIHCTQGKDRSGLIVMLVLFALRVPLHVIKSDYVLSQHGLDRIRDSMREEVNEIGMTE-------SYMMAPESVVDAVWAYLEQEYGGAEGYLDAIGFGEKKRTMLKA 268          
BLAST of NO01G00930 vs. NCBI_GenBank
Match: XP_011401705.1 (hypothetical protein F751_3490 [Auxenochlorella protothecoides] >KFM28660.1 hypothetical protein F751_3490 [Auxenochlorella protothecoides])

HSP 1 Score: 117.9 bits (294), Expect = 7.900e-23
Identity = 93/308 (30.19%), Postives = 148/308 (48.05%), Query Frame = 0
Query:  125 KLQKVKNIRDLSSVKGSGIQPGRIYRTGYLSKASPEDIKFIREKVNFKTLIDLRSEKELGMDDQ----MNSSVYEGYDTWSWAKGAEKVRIDSPHSSPED-QKKALQRHLISVIDEGVYQRGVFKRLAKRK-KAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGAAIKRVLELL--SDKERYPIALYCTAGKDRTGLVILLLLASLGVDPAAIAEDYVLSDSAYADLSDEKAMVGALEQ----NNLDPAKFLRAPRSVIEHTLAYIQKKFGSIEGYLDQIGFTEAQRSRLKAAL 421
            +L +V N RDL+      I+PGRI+R+G  S AS ED   +R  +  +  +D RS  EL  D      +++ V + YD  S  + +E V   +P  +         + H +S+++   + RG+  RL  R   AAA + + G  V+       R   +  IN  GL L+  +LL  +   + R LE++  +  ER P+  +C  GKDRTG V  L+L + G     I  DY  SD         +  +G +E+      +D A F  AP   +E  L + Q+ +G +  Y+  IGF E +++ L+ AL
Sbjct:   36 RLTRVLNARDLAEAL-PAIRPGRIFRSGSPSNASLEDALLLRRDLAIQQFVDFRSSSELAEDTAWPLVLSNGVIKTYD--SSGRVSEVVVDRNPELAGHGCDAFPAELHRLSLLERNKFIRGLLPRLPYRAVAAAAWYKLVGDEVA------MRGAVVPVINAGGLLLIYQILLETASVELARTLEVVAAAAAERKPLLFFCKLGKDRTGTVAALVLTACGASRNQIVADYARSDGV------NEVALGGIERMEDVQGMDSAIFASAPAECMEALLDHAQEAYGGLAKYMTGIGFGEERQAALREAL 328          
BLAST of NO01G00930 vs. NCBI_GenBank
Match: PNW84950.1 (hypothetical protein CHLRE_03g165300v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 117.9 bits (294), Expect = 7.900e-23
Identity = 104/348 (29.89%), Postives = 147/348 (42.24%), Query Frame = 0
Query:  131 NIRDLSSVKGSGIQPGRIYRTGYLSKASPEDIKFIREKVNFKTLIDLRSEKELGMDDQ----MNSSVYEGYDTWSWAKGAEKVRID---SPHSSPE---------------------------------------------DQKKALQRHLISVIDEGVYQRGVFKRLAKRKKAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGAAIKRVLELL--SDKERYPIALYCTAGKDRTGLVILLLLASLGVDPAAIAEDYVLSDS----AYADLSDEKAMVGALEQNNLDPAKFLRAPRSVIEHTLAYIQKKFGSIEGYLDQIGFTEAQRSRLKAAL 421
            N RDLS      I PGR+ R    +  SPED  F+  ++  + LIDLR+ +E+  DD     M ++    Y       G   VR D   S  +SP                                                     RH IS++D G Y       LA   +  A                       Y+N  GLPLL ++LL  S   +++V+E+L  + + R+ +  +C AGKDRTGLV   +LA  G     I EDY  SD+    A A L   + + G      LD A F RAP  V+  TLAY+++++GS+ GYLD +GF   ++ RL+AAL
Sbjct:   81 NGRDLSEA-FPAIPPGRVVRCANPASTSPEDAAFLLRELRVRDLIDLRAGEEIQEDDPGSVLMAATSMRLYARGWLTPGQLFVRPDPLASAATSPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRHHISLLDRGRYY------LALAARIPAAXXXXXXXXXXXXXXXXXXXXXPYVNGGGLPLLYEMLLESSRPEMRQVMEVLLAAAERRHAVLFFCRAGKDRTGLVAAAVLAVAGASEQQIIEDYARSDALHRVALAGLESREELAG------LDMAAFERAPPEVMAATLAYVRRRYGSLAGYLDSVGFGRDKQERLRAAL 415          
BLAST of NO01G00930 vs. NCBI_GenBank
Match: KTB29635.1 (hypothetical protein WG66_17787 [Moniliophthora roreri])

HSP 1 Score: 117.5 bits (293), Expect = 1.000e-22
Identity = 86/300 (28.67%), Postives = 142/300 (47.33%), Query Frame = 0
Query:  123 EIKLQKVKNIRDLSSVKGSGIQPGRIYRTGYLSKASPEDIKFIREKVNFKTLIDLRSEKELGMDDQMNSSVYEGYDTWSWAKGAEKVRIDSPHSSPEDQKKALQRHLISVIDEGVYQRGVFKRLAKRKKAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGAAIKRVLELLSDKERYPIALYCTAGKDRTGLVILLLLASLGVDPAAIAEDYVLS----DSAYADLSDEKAMVGALEQNNLDPAKFLRAPRSVIEHTLAYIQKKFGSIEGYLDQIGFTEAQRSRLKA 419
            ++ L+ + N RD+  +  + +  G +YR+G L +A+P D+  +  +   KT+IDLR++ E                     K  +K  I           + +  H I       Y+  + K L   K    L L+    + +      R +  + +   GL  LN  +L Y  A I + LE+L +   YP+ ++CT GKDR+GL+++L+L +L V    I  DYVLS    D     + +E   +G  E        ++ AP SV++   AY+++++G  EGYLD IGF E +R+ LKA
Sbjct:    5 DVPLESIHNFRDVGHL--TSLPRGLLYRSGRLDEATPSDVHKLSSEYQIKTVIDLRTKSE-------------------HIKQEQKTGIAPRKQEERRPWETIHVHFIG----RRYEVQILKELGLVKAIWLLILM----ILQLRMAAIRVVGRDVLTPKGLEGLNRDMLIYCRAEILQALEILVNPSSYPVLIHCTQGKDRSGLIVMLVLFALRVPLHVIKSDYVLSQHGLDRIRDSMREEVNEIGMTE-------SYMMAPESVVDAVWAYLEQEYGGAEGYLDAIGFGEKKRTMLKA 268          
BLAST of NO01G00930 vs. NCBI_GenBank
Match: OZJ04231.1 (hypothetical protein BZG36_04235 [Bifiguratus adelaidae])

HSP 1 Score: 117.5 bits (293), Expect = 1.000e-22
Identity = 85/306 (27.78%), Postives = 149/306 (48.69%), Query Frame = 0
Query:  127 QKVKNIRDLSSVKGSGIQPGRIYRTGYLSKASPEDIKFIREKVNFKTLIDLRSEKELGMDDQMNSSVYEGYDTWSWAKGAEKVRIDSPHSSPEDQKKALQRHLISVIDEG------VYQRGV---FKRLAKRKKAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGAAIKRVLELLSDKERYPIALYCTAGKDRTGLVILLLLASLGVDPAAIAEDYVLSDSAYADLSDEKAMVGALEQNNLDPAKFLRAPRSVIEHTLAYIQKKFGSIEGYLDQIGFTEAQRSRLKAALRDE 424
            Q +K+     S+  S I+ GR +R+G L  A+  D++ + +K + +T+IDLRSE    ++ + +  V   + + S +            ++ E   K  ++ LI   +EG      +   G    F  + +R   A    I G     +  R  R++    +   GL  LN   L++ G AI + + L+++ +  P+ L+C+ GKDRTGLV+ L LA   +    I  DYV S        D   MV  + +  LD + F  AP  VI   L Y+++K+  ++ Y++++GFT+A + +L+ +L  E
Sbjct:   38 QSLKDRSSHRSLPSSYIKIGRFFRSGRLDDATTGDLEILTKKYSIETIIDLRSE----IEGEKSEGVQRAFPSSSVSALTASDFAAPNRNNLESSFKGSRKDLIWTKEEGNRNTFYINFAGTSFRFNSIWRRAPFALKTKIAGWITVGQKVRAVRAVGETVLASRGLIGLNQDFLDFCGKAIVQAIRLIAEPDYKPVLLHCSPGKDRTGLVVALTLALCSIPEDLIVADYVKSQEGLEPQRD--VMVKEMARQGLD-SSFCDAPAEVIRGVLEYVREKYNGVDAYMERLGFTQADKDKLRKSLLAE 336          
BLAST of NO01G00930 vs. NCBI_GenBank
Match: XP_002505945.1 (predicted protein [Micromonas commoda] >ACO67203.1 predicted protein [Micromonas commoda])

HSP 1 Score: 117.1 bits (292), Expect = 1.300e-22
Identity = 91/310 (29.35%), Postives = 148/310 (47.74%), Query Frame = 0
Query:  129 VKNIRDLSSVKGSGIQPGRIYRTGYLSKASPEDIKFIREKVNFKTLIDLRSEKELGMDDQMNSSVYEGYDTWSWAKGAEKVRIDSPHSSPEDQKKALQRHLISVIDEG-------------VYQRGVFKRL-AKRKKAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGAAIKRVLELLS-DKERYPIALYCTAGKDRTGLVILLLLASLGVDPAAIAEDYVLSDSAYADLSDEKAMVGALEQNN---LDPAKFLRAPRSVIEHTLAYIQKKFGSIEGYLDQIGFTEAQRSRLKAAL 421
            + N RDL S  G+ + PGR++RT    ++S ED   I   +    L+DLRS  E    +    ++   +   S+ + A+     +  +S      A +  ++  +D G              Y R +++R+    +  AA++ +         +RR   +F+  +N  GL LLN+++++ SG  I   L +LS        A YC AGKDRTGLV  L L   G    AI  DY  S       S + A+ G   + +   +D ++F  AP +++  TL+YI++ +GS+EGYLD++GF    R  L  AL
Sbjct:   12 ILNWRDLGSTPGTRVAPGRVFRTATPGRSSEEDAATI-VGLGVARLLDLRSLDEF---EPSPGALQSRFQLRSFTRPADAADPSTGAASTSTAIAAFRASILDDVDAGRAVRYHAPLLDYDRYYRSIYERMEGVERVKAAVYAVQAKLYDDTNQRR---LFVRKVNAGGLTLLNEVMVDGSGPEIAAALCVLSATTPGGATAFYCKAGKDRTGLVAALALHCCGASDDAIVADYTRSQG-----SGKAALGGGKTEGDGTAIDYSRFHGAPETIMRDTLSYIRRGYGSVEGYLDRVGFDADARRTLARAL 309          
BLAST of NO01G00930 vs. NCBI_GenBank
Match: EEB89815.1 (hypothetical protein MPER_12052 [Moniliophthora perniciosa FA553])

HSP 1 Score: 114.4 bits (285), Expect = 8.700e-22
Identity = 90/301 (29.90%), Postives = 143/301 (47.51%), Query Frame = 0
Query:  123 EIKLQKVKNIRDLSSVKGSGIQPGRIYRTGYLSKASPEDIKFIREKVNFKTLIDLRSEKELGMDDQMNSSVYEGYDTWSWAKGAEKVRIDSPHSSPEDQKKALQRHLISVIDEG-VYQRGVFKRLAKRKKAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGAAIKRVLELLSDKERYPIALYCTAGKDRTGLVILLLLASLGVDPAAIAEDYVLS----DSAYADLSDEKAMVGALEQNNLDPAKFLRAPRSVIEHTLAYIQKKFGSIEGYLDQIGFTEAQRSRLKA 419
            ++  + + N RD+  +  + +  G +YR+G L +  P DI  +  + + KT+IDLR   E                     K  +K  I     +P  Q++      I +   G  Y+  + + L   K  A  FLI    + +      R +  N +   GL  LN  +L Y  A I + LE+L D   YP+ ++CT GKDR+GL+I+L+L +L V    I  DY+LS    D     + +E   +G  E        ++ AP SV++   AY+++++G  EGYLD IGF E +R+ LKA
Sbjct:    5 DVPFESIHNFRDIGHL--TSLPKGILYRSGRLEEDRPSDIHKLSSEYHIKTVIDLRPRSE-------------------HIKQEQKTGI-----APSKQEERRPWETIRIYFIGRQYEVRMLRELGLVK--AIWFLIL--MLFQLRAAAIRIVGRNVLTPKGLEGLNRDMLIYCRAEILQALEILVDPSSYPVLIHCTQGKDRSGLIIMLVLFTLRVPLHVIKSDYILSQRGLDRIRDSMREEVKEIGMTE-------VYMMAPESVVDVVWAYLEQEYGGAEGYLDAIGFGEXKRTMLKA 268          
The following BLAST results are available for this feature:
BLAST of NO01G00930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_016758042.13.200e-2431.67hypothetical protein SEPMUDRAFT_70870 [Sphaerulina... [more]
PSC68002.15.500e-2428.38tyrosine serine [Micractinium conductrix][more]
XP_016608616.17.100e-2430.13hypothetical protein SPPG_03701 [Spizellomyces pun... [more]
ESK85139.16.000e-2329.00tyrosine serine protein [Moniliophthora roreri MCA... [more]
XP_011401705.17.900e-2330.19hypothetical protein F751_3490 [Auxenochlorella pr... [more]
PNW84950.17.900e-2329.89hypothetical protein CHLRE_03g165300v5 [Chlamydomo... [more]
KTB29635.11.000e-2228.67hypothetical protein WG66_17787 [Moniliophthora ro... [more]
OZJ04231.11.000e-2227.78hypothetical protein BZG36_04235 [Bifiguratus adel... [more]
XP_002505945.11.300e-2229.35predicted protein [Micromonas commoda] >ACO67203.1... [more]
EEB89815.18.700e-2229.90hypothetical protein MPER_12052 [Moniliophthora pe... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008285NSK008285Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00930.1NO01G00930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668178gene_67Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100477g4gene1594Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00930.1NO01G00930.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00930 ID=NO01G00930|Name=NO01G00930|organism=Nannochloropsis oceanica|type=gene|length=2697bp
ACAGAGACGTTTCTTAGTTCTCAGGCTTTCACGCGCCCAAGCACACAGAA
CTCCTTTCCTCCCTCCCTTAAAAAGCTTCCACGAGGCGACCTCCCCACCC
CCTTCCTCCCGTTCCTTGTTTCAGAGTTCGAAAACCGGAGCACCCACACT
CAGCGGTAAAACGATCTGTTATCCATGAGGGTCAGCAATTGCATGTCGAT
GATCCTCTTCCCCCTTCTACTAGCCGTCGCTGTCGATGCCTTTGTGCCCC
TTCCCCCTGCCTGTGCCTTGGCCTCCTTCTCCTCCTCTTTTCCTGCAATC
TCCTCTTCCCCTTCTACCAGCATTTTGCTCTCTAGCGAAGGAAGGATAAG
AAGATCACTGGCATCATCCACTGGCCGCTGCTCTTTTTGTCGCCCTGCCA
CCGCTGCCGCCTCCCTGGATGGAATGAGgtacgtcttggtcgcgagtctg
gtcatgcccactcctttcctccacccctccctccacccctccttttttgc
gttcacagtgccacccgatctcacgtccgtcactctctcctctctcacac
ccctacctttgaaatcacatcagCGACACCCCCCCCTCTACCCCCGCCTC
CTCCTCCCCCTCCTCCACTCCCTCCTCCGACGCCCCCGCCGCTGCGGCAG
CAGCTGCCGCAGTCGCAGCCGCACTTGCCTCTGGGGAGATTAAGCTGCAA
AAAGTGAAAAACATTCGTGATTTGTCCTCTGTGAAGGGCTCGGGGATTCA
ACCCGGGCGGATCTATAGGACGGGATATTTGAGCAAGGCTTCGCCGGAGG
ATgtaagaagggagggagggagggaaggaaggaggtcatgtaggaagtga
gggaggatatggagagatgttaaggactgttcgtgtcctgccaccatttg
tacatcttgttgtcatcgattactcatatttcacgtttttctcttccctc
cttccctccctccctccctctcagATAAAATTCATCAGGGAGAAGGTCAA
CTTCAAGACCCTCATTGATCTGCGCTCAGAGAAAGAGgttaggcaaagat
aatgcggggagggagatggagagggaggggaggagggaggggtaaaagca
gtgcacccacgtaaaagttgtttcattaatagagataatgggatatgaat
acgcgtgtacctcttcgtttcaccgattttaattacatgtacacacaccg
taataacagCTTGGGATGGATGACCAAATGAACAGCAGCGTCTACGAGGg
tacgtgcactctatttcttcctccctccttccctccttccctctctccct
cgttcacccatcacccccctccctccccctccctccctccctccctccct
ccctccctccctccctccctccctccagGTTACGACACCTGGTCTTGGGC
AAAAGGGGCCGAGAAAGTCCGCATCGACTCCCCCCACTCCTCCCCCGAAG
ACCAAAAAAAGGCTTTACAACGTCATCTCATCAGTGTCATTGATGAGGGC
GTTTACCAGCGCGGGGTTTTCAAGAGGCTGGCCAAGCGGAAGAAGgtacg
tgcgtacctgcccctccctccctcctccctttcaccctcctctccctccc
ttccaccccccctccctctccctcggtacgtcaacttcccttcctccgtc
cgtccctccctccctccctctctccctccctcagGCTGCCGCCCTCTTCC
TCATCACGGGCGGGGCCGTGAGCAAGCGGGCCCGTCGTCGCGCCCGCTCC
ATTTTCCTTAATTACATCAACGACGCCGGTCTCCCCCTCCTCAACGATCT
GCTGCTGAATTACTCGGGCGCGGCGATCAAGCGTGTTCTGGAGCTCCTGT
CGGACAAGGAAAGATACCCTATTGCCCTCTACTGCACCGCGGGGAAGGAC
AGgtagacaccaaaacacaaaccctctcttccctccctcctcctcttcgt
tcctccctccctcccttcctccgtccctcctgccttttcttcgctgtctc
tctctctcgccccatggagatggtcactcagcccttcctccctcccttcc
tccctcccttcctccctccctcagGACCGGTCTGGTCATCCTTCTCTTGC
TGGCCTCGCTGGGAGTCGATCCCGCGGCCATAGCCGAGGACTACGTTCTA
TCGGACTCGGCCTACGCGGACTTGAGCGACGAAAAAGCCATGGTTGGGGC
GTTGGAACAGgtgcctccctccccccctccctccctccctccctcccttc
ccttcatctctgtcttccctcccttcaattttttttcaagttcctaccta
tctctaattccatccctcttattttccaatctctctatgttgtatcatct
ttcgaatctctccatctaaatcccaattcaatctctcaatccccattgga
ccccgccaagttcttgcgggtgccttatcccaataccatctctctaacca
ctttacctgacccttacacatctttcgaatctctccatctaaatcccaac
gccctctctcaatgcccagAACAACTTGGACCCCGCCAAGTTCTTGCGGG
CGCCCCGATCCGTCATCGAGCACACCCTGGCTTACATCCAAAAGAAATTC
GGGTCTATCGAAGGATATTTGGATCAAATCGGCTTCACAGAGGCCCAGAG
GTCGCGGCTCAAGGCGGCTTTAAGGGACGAGTAGAAGGAGGGAGGGA
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protein sequence of NO01G00930.1

>NO01G00930.1-protein ID=NO01G00930.1-protein|Name=NO01G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=424bp
MRVSNCMSMILFPLLLAVAVDAFVPLPPACALASFSSSFPAISSSPSTSI
LLSSEGRIRRSLASSTGRCSFCRPATAAASLDGMSDTPPSTPASSSPSST
PSSDAPAAAAAAAAVAAALASGEIKLQKVKNIRDLSSVKGSGIQPGRIYR
TGYLSKASPEDIKFIREKVNFKTLIDLRSEKELGMDDQMNSSVYEGYDTW
SWAKGAEKVRIDSPHSSPEDQKKALQRHLISVIDEGVYQRGVFKRLAKRK
KAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGAAIK
RVLELLSDKERYPIALYCTAGKDRTGLVILLLLASLGVDPAAIAEDYVLS
DSAYADLSDEKAMVGALEQNNLDPAKFLRAPRSVIEHTLAYIQKKFGSIE
GYLDQIGFTEAQRSRLKAALRDE*
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Synonyms
Publications