NO01G00910, NO01G00910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00910 vs. NCBI_GenBank
Match: CCA17702.1 (conserved hypothetical protein [Albugo laibachii Nc14] >CCA18348.1 conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 77.0 bits (188), Expect = 5.600e-11 Identity = 45/128 (35.16%), Postives = 61/128 (47.66%), Query Frame = 0 Query: 11 YAKLIGRIFYVDDEARAKGVREEDFDAIITALPARLGRHQNQPPPMMKGEEGGGKEGEGEGCFVALGTTKKVSRHHATINWDFIKGCYVIRCFSKNGMTVNKKHYATDEQAILSDRSAVRMGPVNFYF 139 YAKL GRI DD+ F+A+IT LP LGR PP G ++LG K +SR HA I W+ K C+ + C KNG+ VN D+ L+ ++ +R+GP YF Sbjct: 30 YAKLSGRI--ADDQV---------FEALITHLPTELGRGPIVPP----------SGTVASGARISLGEQKAISRQHAKIFWNTEKCCFEMECLGKNGLFVNGSFVTKDQVIPLTSKTPIRIGPARLYF 136
BLAST of NO01G00910 vs. NCBI_GenBank
Match: CCI44315.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 75.1 bits (183), Expect = 2.100e-10 Identity = 46/128 (35.94%), Postives = 63/128 (49.22%), Query Frame = 0 Query: 11 YAKLIGRIFYVDDEARAKGVREEDFDAIITALPARLGRHQNQPPPMMKGEEGGGKEGEGEGCFVALGTTKKVSRHHATINWDFIKGCYVIRCFSKNGMTVNKKHYATDEQAILSDRSAVRMGPVNFYF 139 YAKL GRI DD+A F+A+IT LP LGR P G G ++LG K +SR HA I W+ K C+ + C KNG+ VN A ++ L+ ++ +R+GP YF Sbjct: 30 YAKLSGRI--ADDQA---------FEALITHLPTELGRGPIVP---SSGPVASGSR-------ISLGEQKAISRQHAKILWNAEKCCFEMECLGKNGLFVNGSFIAKNQVIPLTSKTPIRIGPARLYF 136
BLAST of NO01G00910 vs. NCBI_GenBank
Match: XP_012200890.1 (hypothetical protein SPRG_06688 [Saprolegnia parasitica CBS 223.65] >KDO28450.1 hypothetical protein SPRG_06688 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 69.3 bits (168), Expect = 1.200e-8 Identity = 37/116 (31.90%), Postives = 55/116 (47.41%), Query Frame = 0 Query: 25 ARAKGVREED--FDAIITALPARLGRHQNQPPPMMKGEEGGGKEGEGEGCFVALGTTKKVSRHHATINWDFIKGCYVIRCFSKNGMTVNKKHYATDEQAILSDRSAVRMGPVNFYF 139 A+ +G+ +ED F+A IT LP + GR G G ++LG VSR HA+INW+ + C+ + C KNGM K E +L+ + +R+G YF Sbjct: 20 AKLQGMIDEDRPFEAFITQLPVKFGR------------------GAQAGHAISLGDLMSVSRQHASINWNAERSCFELTCLGKNGMHAGGKRIEQKEVVVLTPKMPLRIGGARIYF 117
BLAST of NO01G00910 vs. NCBI_GenBank
Match: CBJ48988.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 68.9 bits (167), Expect = 1.500e-8 Identity = 46/138 (33.33%), Postives = 65/138 (47.10%), Query Frame = 0 Query: 4 EDDGDTGYAKLIGRIFYVDDEARAKGVREEDFDAIITALPARLGRHQNQPPPMMKGEEGGGKEGEGEGCFVALGTTKKVSRHHATINWDFIKGCYVIRCFSKNGMTVNKKHYATDEQAILSDRSAVRMGPVNFYFHLP 142 +DD +AKL G++ D A F +T LP+ LGR + EG K F+ LG +K +SR HA I W + Y I+C SKNGM V ++A L R+ +++GP + YF LP Sbjct: 7 KDDEPCAFAKLWGQL----DGA--------PFHTYVTQLPSTLGRGS-------QATEGARKSAG----FIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLP 121
BLAST of NO01G00910 vs. NCBI_GenBank
Match: OMJ84956.1 (hypothetical protein SteCoe_13865 [Stentor coeruleus]) HSP 1 Score: 68.6 bits (166), Expect = 2.000e-8 Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 0 Query: 72 CFVALGTTKKVSRHHATINWDFIKGCYVIRCFSKNGMTVNKKHYATDEQAILSDRSAVRMGPVNFYFHLP 142 CF+ LG KK+SR HA I W+ KGC+ I+ KN + VNK ++E L ++ +++GP FYF LP Sbjct: 81 CFIPLGDHKKISRKHAKIFWNTDKGCFQIQNIGKNPIIVNKVDVLSNEIVDLLGKTPIKIGPACFYFLLP 150
BLAST of NO01G00910 vs. NCBI_GenBank
Match: OQR94859.1 (hypothetical protein ACHHYP_00878 [Achlya hypogyna]) HSP 1 Score: 68.2 bits (165), Expect = 2.600e-8 Identity = 40/116 (34.48%), Postives = 58/116 (50.00%), Query Frame = 0 Query: 25 ARAKGVREED--FDAIITALPARLGRHQNQPPPMMKGEEGGGKEGEGEGCFVALGTTKKVSRHHATINWDFIKGCYVIRCFSKNGMTVNKKHYATDEQAILSDRSAVRMGPVNFYF 139 A+ KG+ +D ++A+IT LP LGR G K G+ + LG VSRHHATI+W+ KG + ++C KNGM + K D+ L + +R+G YF Sbjct: 20 AKLKGMINDDEPYEAVITQLPVDLGR--------------GPKVGQAPS-RIGLGDLMSVSRHHATIDWNTEKGVFELKCVGKNGMYASGKKIEKDQIVTLVPKMPLRIGGARVYF 120
BLAST of NO01G00910 vs. NCBI_GenBank
Match: GAY05355.1 (Hypothetical protein PINS_013162 [Pythium insidiosum]) HSP 1 Score: 67.8 bits (164), Expect = 3.400e-8 Identity = 43/136 (31.62%), Postives = 60/136 (44.12%), Query Frame = 0 Query: 3 VEDDGDTGYAKLIGRIFYVDDEARAKGVREEDFDAIITALPARLGRHQNQPPPMMKGEEGGGKEGEGEGCFVALGTTKKVSRHHATINWDFIKGCYVIRCFSKNGMTVNKKHYATDEQAILSDRSAVRMGPVNFYF 139 VE+ YAKL GR+ + F+ +IT LP LGR P G +ALG K +SR HA I K C+ ++C KNG++V K+ A D LS + +++GP YF Sbjct: 16 VENRPPLAYAKLWGRV-----------AEDAPFEMLITHLPVELGRGPLSTTP---------------GPRIALGEAKAISRQHARIQ---DKSCFELQCLGKNGISVAGKYIAKDNTVELSSKMPLKIGPARLYF 122
BLAST of NO01G00910 vs. NCBI_GenBank
Match: OMJ92027.1 (hypothetical protein SteCoe_5347 [Stentor coeruleus]) HSP 1 Score: 67.0 bits (162), Expect = 5.800e-8 Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0 Query: 72 CFVALGTTKKVSRHHATINWDFIKGCYVIRCFSKNGMTVNKKHYATDEQAILSDRSAVRMGPVNFYFHLP 142 CF+ LG KK+SR HA I W+ KGC+ I+ KN + V+K L D++ +++GPV FYF LP Sbjct: 79 CFIPLGDHKKISRKHAKIFWNKEKGCFQIKNIGKNPIIVSKIDIPNKGVVDLLDKTPIKIGPVCFYFLLP 148
BLAST of NO01G00910 vs. NCBI_GenBank
Match: XP_008619760.1 (hypothetical protein SDRG_15367 [Saprolegnia diclina VS20] >EQC26858.1 hypothetical protein SDRG_15367 [Saprolegnia diclina VS20]) HSP 1 Score: 66.6 bits (161), Expect = 7.600e-8 Identity = 40/128 (31.25%), Postives = 56/128 (43.75%), Query Frame = 0 Query: 11 YAKLIGRIFYVDDEARAKGVREEDFDAIITALPARLGRHQNQPPPMMKGEEGGGKEGEGEGCFVALGTTKKVSRHHATINWDFIKGCYVIRCFSKNGMTVNKKHYATDEQAILSDRSAVRMGPVNFYF 139 YAKL G I E+ F+A IT LP GR G + G+ G + LG VSR HA+I+W+ + C+ + C KNGM K E +L+ + +R+G YF Sbjct: 19 YAKLQGMI-----------NEEQSFEAFITQLPVEFGR--------------GAQAGQAAG-RIGLGDLMSVSRQHASIDWNAERSCFELTCLGKNGMHAGGKRIEQKEVVVLTPKMPLRIGGARIYF 120
BLAST of NO01G00910 vs. NCBI_GenBank
Match: XP_002909218.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY58032.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 64.7 bits (156), Expect = 2.900e-7 Identity = 42/136 (30.88%), Postives = 57/136 (41.91%), Query Frame = 0 Query: 3 VEDDGDTGYAKLIGRIFYVDDEARAKGVREEDFDAIITALPARLGRHQNQPPPMMKGEEGGGKEGEGEGCFVALGTTKKVSRHHATINWDFIKGCYVIRCFSKNGMTVNKKHYATDEQAILSDRSAVRMGPVNFYF 139 VE YAKL GR+ + F+ +IT LPA LGR P + VALG K VSR HA I W C+ ++C KNGM + K ++ LS + +++G YF Sbjct: 18 VEKRPPLAYAKLSGRV-----------EGDTPFEKLITHLPAELGRGPISSVPDHR---------------VALGEQKAVSRLHARIQWSQTDSCFELQCLGKNGMFADGKFVTKNQTIKLSSKMPLKIGHARVYF 127 The following BLAST results are available for this feature:
BLAST of NO01G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00910 ID=NO01G00910|Name=NO01G00910|organism=Nannochloropsis oceanica|type=gene|length=994bpback to top protein sequence of NO01G00910.1 >NO01G00910.1-protein ID=NO01G00910.1-protein|Name=NO01G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=155bpback to top Synonyms
Publications
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