NO01G00830, NO01G00830 (gene) Nannochloropsis oceanica

Overview
NameNO01G00830
Unique NameNO01G00830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2070
Alignment locationchr1:209519..211588 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:209519..211588 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008301NSK008301Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00830.1NO01G00830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00830.1NO01G00830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00830 ID=NO01G00830|Name=NO01G00830|organism=Nannochloropsis oceanica|type=gene|length=2070bp
AGGGAAATGGAACGCCACACCTTTCTCCAGGGGTTGACATGGCTGATACC
TTACAACGAGGTGTACAACCACCTCGAAGAAGACTTTAAAGACGACGCCC
CCTTAACGCCGCAATGGCCCCCGATCACCTATAATTGGCCTGCCACGGAT
GCTGCCAGTGCTGCGTCTGCGGCGATGCATCCGCCAGGACGCCAAAAACA
ACGCTGCCGACGCACCTTGGCCTCGCGCGTCATCTTGCAAGACAGTTCCT
GCTGCCTGCACCGGGGCCCCAAAGCCCTCTTTTTCGCCGCCGAAAGGCCG
CAAGACGATGCCACCCAAATGTCCTTCCAAATAGCTATGGTGGAGATGAA
CCCGGCGGCCTTTCGTGCTATCGTTCAGCAGCACATGCAGCGACGAAGGC
AACAGTCGCGGCGGGAGGAGCATGAGAAGCAACGTATACGACGAATGGAG
CGGTGGCGAGAGGAGCGAGAACAACGAACACCCGCACCAGCCGACGATGA
GAGCAGCTGTCTGCTGCAGCCTCCCGACTCTTCTTCCGTGTCTTCCTCCA
ATACCACCGGCAGTGGGGATGGTAGCAATGGCTGGAAGGATAGGGAAGGC
GACGAAGGCCTGGAAGAGGAGGACACCAAAGTCGAGAAGGAAGAGGACGA
CGATACTGTCGTGCCAGCACTCTTCTTCCGCATCGATGACCATGTATATC
TCGTAGATCATATGGCCATGGAAACAATCGTCTGCCCCAAAGGCGATCCC
CGGGCCGAGGCACCTCCGTCGTCCTCCACTTCCTCTGAGCCTTCCTCTCT
CCCTCCCTATGCAGCCTTCAAATTCCCCACAGTCACCTTGCGTTTCTGGC
AGTCCCGCCTGTCTTTATCACCCCTGAAGGCCACACAACCATTAATCAGC
GCAATCGATGCGATTTCTCGAGGACTTGCTCGACGATTGTGGCTTCCTCC
GTCGTTGGAAATCTCGCCGTCCGCAACAGTTATAAAACCAACAGCAGCAG
CAGCAGCAGCAATAGCAGCAGCAGCAGCAGCAGCAGCAAGAACAGGTGTC
AAGAGTATGGGAAAAGAATTAGGAGGAGCAGGAGGCGTCGAGGCAGCAGA
GAGCTTTCTAAGAGCGGTCGAGACGCTTTTGCTACTGCAGCCCTCCTCGT
CCTCCTCCTCCTCCTGCTCTTCCTCCCTCGCGTCCTCCGCTGTCGAGGAC
ATTTTCCTCCTCCGGCAGGCTGGTCGCATGTTCCGGAAGGCACTGGTGCC
GCTCTCTTACAGGATGGCAGGCTCAGAAGAGAACAAAAGGACACGAGGCC
TACTGGAGGAAGAAATAGCTTGGCGCCGGCGATGGGATCGCTTACTGATG
CAAATGTTCCCTATACGCCGCCCTCCATCGGGAGGGGCAGGAGGTGGGGG
GAAGGAGAGCAAGGTAGAGAGTGACTTAGTTGAAAGTGTGGAGGTGGCGA
CTGCGGCATTGAAGGCCGTCGTAAGGGAGAGGCATAGGGAGGCGATGAGG
GTGCGTACTGTGAGAGCACCGCAAGGGGAGGAGCCGCAGACGCAGCAGAC
GCAGCAGACGCAGCAGCAGCAGCAGGCGCTGCCAGGTGAGGGGCAGGAAG
AGAGGGGTGAAGATAAAGCAGGAAGAACAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGCTGGTTGTGGTCCTGGTGGTGAGGGGGAGGGAGAGGGGGA
GGGCGGCATGCATGGTGTGGAATGTGCGGGCTCCGAGGCAGGGATACGGG
CCAAGGGGACATATGTCGCCTCGTCCTTGACCGGGAGGACAAGGATGGGT
GGGTTCAAGAAACGATTGGCGACAGCTACGGTAACATCAGCAGCGCCAGC
ACAGCAGCAGCTGCAGCAGCAACAACCGCAGCAACAACAAGCACCAAAAT
CGTCCACCCCGGCACAAGGGAAAGGCCAAGGAAGGAAAAAGCGAGCGCGG
ACGATCGCAACGTGAAGAGATGAGGAATGAAGTTGTTTTCATAAAAGGAA
GAACGTGATAGCGAAATGGAAAATGAAGGGCGAATACGATCAACGTTTGG
TTGCTCGCATGAAAACAGGT
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protein sequence of NO01G00830.1

>NO01G00830.1-protein ID=NO01G00830.1-protein|Name=NO01G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=653bp
MERHTFLQGLTWLIPYNEVYNHLEEDFKDDAPLTPQWPPITYNWPATDAA
SAASAAMHPPGRQKQRCRRTLASRVILQDSSCCLHRGPKALFFAAERPQD
DATQMSFQIAMVEMNPAAFRAIVQQHMQRRRQQSRREEHEKQRIRRMERW
REEREQRTPAPADDESSCLLQPPDSSSVSSSNTTGSGDGSNGWKDREGDE
GLEEEDTKVEKEEDDDTVVPALFFRIDDHVYLVDHMAMETIVCPKGDPRA
EAPPSSSTSSEPSSLPPYAAFKFPTVTLRFWQSRLSLSPLKATQPLISAI
DAISRGLARRLWLPPSLEISPSATVIKPTAAAAAAIAAAAAAAARTGVKS
MGKELGGAGGVEAAESFLRAVETLLLLQPSSSSSSSCSSSLASSAVEDIF
LLRQAGRMFRKALVPLSYRMAGSEENKRTRGLLEEEIAWRRRWDRLLMQM
FPIRRPPSGGAGGGGKESKVESDLVESVEVATAALKAVVRERHREAMRVR
TVRAPQGEEPQTQQTQQTQQQQQALPGEGQEERGEDKAGRTGGGGGGGGG
GAGCGPGGEGEGEGEGGMHGVECAGSEAGIRAKGTYVASSLTGRTRMGGF
KKRLATATVTSAAPAQQQLQQQQPQQQQAPKSSTPAQGKGQGRKKRARTI
AT*
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Synonyms
Publications