NO01G00820, NO01G00820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00820 vs. NCBI_GenBank
Match: EPR59668.1 (DEAD/DEAH box helicase domain-containing protein [Toxoplasma gondii GT1] >KFG41626.1 DEAD/DEAH box helicase domain-containing protein [Toxoplasma gondii FOU] >KFG42171.1 DEAD/DEAH box helicase domain-containing protein [Toxoplasma gondii GAB2-2007-GAL-DOM2]) HSP 1 Score: 255.0 bits (650), Expect = 6.600e-64 Identity = 175/492 (35.57%), Postives = 254/492 (51.63%), Query Frame = 0 Query: 153 GTFGAQVPFASLGLSPWLVSALNAAGKPISTHIQALSLPSILEGNDVVIGSETGAGKTLAYLLPVLDLAHRAAPARTEAQIREMEYYMERKAALKGGAAGWEGDNRLTPLAEDFPWETPFAIVLVPNRQLSEQVLQMGRELLTQQKGEGEREGRPRIDALAGSVEEWPFHPKTRP-APDVLVCTPATLSFF-----DRDIGLFSRVGMVVVDEADMLLEGDYGRHLDRILVAFKRADKLHVIRSEPSTQYVLAAATLPTYGLKSVEELVRKRFPSAMRVNTDMMHRHHPKLTQLFVEAPIGL--DEKIGMLKKVLQRLQEKGRALAAKEGGEGKEDXXXXXXXXXXXXKTMIFLNTAQAAARVHDALAQADFPSV---AFHKDIRSSDREENLRQFRSNSVPLLVCTDLASRGLDIPDVKQVIQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDEGSTDLVESLQLAGEE----SLDRSFSRQRGFRKKVK 630 G G ++ F LG+ P V AL G +T IQ LS+P+ILEG D VIG+ETG+GKTL Y++ ++ +++M + + AA+ L P P+A+V+VP R+L+ QV+ R L R+ + G+ WPF P +PD++VCTP L+ F +D+ F + M+ +DEADMLLEG Y + ++ I AF+RAD+ + TQY+ AAAT+P G KSV +++ + P A TD +H+H +L Q FV+ P G DE++ +L L++L GG K MIF NTAQ A + +AL +A P+ F +I DR NL F +LVCTD ASRGLDI V V+Q +FA + V HLHR+GR R + G+A+NFY + LV+ +Q A + S+ +FSR+R FRKK++ Sbjct: 220 GHSGGRLVFPRLGVFPDFVEALGNFGVRQATDIQQLSIPAILEGRDTVIGAETGSGKTLGYVVGLVQ----------NILLQKMIHEKKEDAAV------------LQKADLPIPRHHPYAVVIVPTRELALQVVAWARRLC--------RKTPVTAQLMLGTYTRWPFGTLAIPTSPDLVVCTPPVLAPFVKGGHAKDLTPFREIQMLALDEADMLLEGGYRQAMEGIFTAFRRADRQSAESGKRRTQYIFAAATIPDRGPKSVRKVISRLCPRATFFCTDSLHQHREQLQQEFVQVPAGASDDERVSLLLSRLKKL-----------GGS---------------DKVMIFCNTAQTARSLFEALEKA-LPTTRPKLFSSEIDQKDRSFNLGLFARGKSRVLVCTDAASRGLDIAGVTLVVQYDFALSAVAHLHRVGRVARGEQPGKALNFYYDTQKALVDVIQRAARDPVSPSVADAFSRKRSFRKKLE 654
BLAST of NO01G00820 vs. NCBI_GenBank
Match: PHJ25613.1 (dead deah box helicase domain-containing protein, partial [Cystoisospora suis]) HSP 1 Score: 255.0 bits (650), Expect = 6.600e-64 Identity = 177/484 (36.57%), Postives = 244/484 (50.41%), Query Frame = 0 Query: 159 VPFASLGLSPWLVSALNAAGKPISTHIQALSLPSILEGNDVVIGSETGAGKTLAYLLPVLDLAHRAAPARTEAQIREMEYYMERKAALKGGAAGWEGDNRLTPLAEDFPWETPFAIVLVPNRQLSEQVLQMGRELLTQQKGEGEREGRPRIDALAGSVEEWPFHPKTRP-APDVLVCTPATLSFFDR-----DIGLFSRVGMVVVDEADMLLEGDYGRHLDRILVAFKRADKLHVIRSEPSTQYVLAAATLPTYGLKSVEELVRKRFPSAMRVNTDMMHRHHPKLTQLFVEAPIGLDEKIGMLKKVLQRLQEKGRALAAKEGGEGKEDXXXXXXXXXXXXKTMIFLNTAQAAARVHDALAQ---ADFPSVAFHKDIRSSDREENLRQFRSNSVPLLVCTDLASRGLDIPDVKQVIQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDEGSTDLVESLQLAGEE----SLDRSFSRQRGFRKKVK 630 V F +G+ P AL G +T IQ L++P+IL G D VIG+ETG+GKTL Y++ V+ I++M + + AA+ + A P P+A+++VP R+L+ QV+ R L R+ + G+ WPF P +PD++VCTP+ L+ F R +G F + +VV+DEADMLL+G Y +D I AF++AD+ TQY+ AAAT+P G KSV + + P A T +H+H +L Q F+E P G E+ M L K R L+ E K MIF NTAQ A RV L + A P + F DI DR NL F +LVCTD ASRGLDI V V+Q +FA + V HLHR+GR RAG+ GRA+NF+ E LV +Q A + S+ +FSR+R FRKK+K Sbjct: 208 VSFPRIGIFPDFAEALQGLGVTRTTDIQQLAIPAILGGLDTVIGAETGSGKTLGYIIGVVQ----------NILIQKMIHEKKEDAAM------------MEKEALPIPRHHPYAVIIVPTRELALQVVAWVRRLC--------RKTTITAQLMLGTYTRWPFGTLALPTSPDLVVCTPSVLAPFARGTKTKSLGPFREIQVVVLDEADMLLDGGYRESMDAIFTAFRKADQQLAREKRRRTQYIFAAATIPDRGPKSVRKTITSLCPKATFFYTRSLHQHKEQLAQEFIEVPPGASEEDRM-----ALLLGKLRELSGNE-------------------KVMIFCNTAQTAQRVLKTLEKEIPASRPKL-FSSDIDQKDRAFNLGLFSRGKCRVLVCTDAASRGLDIVGVTLVVQYDFALSAVSHLHRVGRVARAGQPGRALNFFSEDQKLLVSIVQEAARDPHSTSVAAAFSRRRSFRKKIK 636
BLAST of NO01G00820 vs. NCBI_GenBank
Match: PFH31979.1 (DEAD/DEAH box helicase domain-containing protein [Besnoitia besnoiti]) HSP 1 Score: 250.8 bits (639), Expect = 1.300e-62 Identity = 176/496 (35.48%), Postives = 259/496 (52.22%), Query Frame = 0 Query: 149 PANTGT-FGAQVPFASLGLSPWLVSALNAAGKPISTHIQALSLPSILEGNDVVIGSETGAGKTLAYLLPVLDLAHRAAPARTEAQIREMEYYMERKAALKGGAAGWEGDNRLTPLAEDFPWETPFAIVLVPNRQLSEQVLQMGRELLTQQKGEGEREGRPRIDALAGSVEEWPFHPKTRP-APDVLVCTPATLSFF-----DRDIGLFSRVGMVVVDEADMLLEGDYGRHLDRILVAFKRADKLHVIRSEPSTQYVLAAATLPTYGLKSVEELVRKRFPSAMRVNTDMMHRHHPKLTQLFVE-APIGLDEKIGMLKKVLQRLQEKGRALAAKEGGEGKEDXXXXXXXXXXXXKTMIFLNTAQAAARVHDALAQADFPSV---AFHKDIRSSDREENLRQFRSNSVPLLVCTDLASRGLDIPDVKQVIQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDEGSTDLVESLQLAGEESLDRS----FSRQRGFRKKVK 630 PA G+ FG ++ F LG+ P V +L+ +T IQ LS+P+ILEG D VIG+ETG+GKTL Y++ ++ +++M + + AA+ L P P+A+V+VP R+L+ QV+ R L R+ + G+ WPF P +PD++VCTP L+ F +D+ F + MV VDEADMLLEG Y + ++ I AF+RAD+ + TQY+ AAT+P G KSV +++ + P A TD +H+H L Q FVE + + DE+ + +L+RL++ G G E K M+F NTAQ A RV +AL + + P+ F ++ DR NL F +LVCTD ASRGLDI V VIQ +FA + + HLHR+GR R G+ G+A+NF+ + LV ++ A E+ + S FSR+R FRKK++ Sbjct: 207 PACRGSPFGDRLVFPRLGVFPDFVDSLSNFNVREATEIQQLSIPAILEGRDTVIGAETGSGKTLGYVVGLVQ----------NILLQKMIHEKKEDAAV------------LQKTDLPIPRHHPYAVVIVPTRELALQVVAWARRLC--------RKTTITAQLMLGTYARWPFGTLAIPTSPDLVVCTPPVLAPFAKGGHTKDLTPFREIQMVAVDEADMLLEGGYRQTMEGIFTAFRRADRQCTAKGLRRTQYIFTAATIPDRGPKSVRKIISRLCPKATFFCTDNLHQHRQLLEQEFVEVSSLAPDEE--RIHLLLRRLKDLG----------GHE-------------KIMVFCNTAQTARRVFEAL-EKELPAARPKLFSSEMDQKDRSFNLGVFARGKSKILVCTDAASRGLDIAGVTLVIQYDFALSAITHLHRVGRVARGGQPGKALNFFLDSQKVLVGVIRKAAEDPVSTSVADAFSRKRSFRKKMR 646
BLAST of NO01G00820 vs. NCBI_GenBank
Match: GAX15979.1 (hypothetical protein FisN_22Hh166 [Fistulifera solaris]) HSP 1 Score: 221.9 bits (564), Expect = 6.200e-54 Identity = 176/541 (32.53%), Postives = 266/541 (49.17%), Query Frame = 0 Query: 157 AQVPFASLGLSPWLVSALNAAGKPI----STHIQALSLPSILEGNDVVIGSETGAGKTLAYLLPVLDLAHRAAPARTEAQIREMEYYMERKAALKGGAAGWEGDNRLTPLAEDFPWETPF--AIVLVPNRQLSEQVLQMGRELL-----------TQQKGEGEREGRPRIDALAGSVEE----WPFHPKTRPAPDVLVCTPATL---SFFDRDIGLFSRVGMVVVDEADMLLEGDYGRHLDRILVAFKRADK-LHVIRSEPSTQYVLAAATLPTYGLKSVEELVRKRFPSAMRVNTDMMHRHHPKLTQLFVEAPIGLDEKIGMLKKVLQRLQEKGRALAAKEGGEGKEDXXXXXXXXXXXXKTMIFLNTAQAAARVHDALAQADFPSVAFHKDIRSSDREENLRQFRSNSV----PLLVCTDLASRGLDIPDVKQVIQVEFAPNVVQHLHRIGRAVRA--GREGRAVNFYDEGSTDLVESLQLAGEE---------------------------------SLDRSFSRQRGFRKKVKKYGR 634 +Q + SL SP L+ L + I + IQ+L+ S+ EG +V++G+ETG GKTLAYLLP ++ A L + RLT + + F A+VLVPN++L +QV++M L Q+ + + + R+ L G ++E PF T+P D++V TPA L + + + +F+ + ++VDEADMLL+G Y R L+++L+ F+RAD+ +H P TQYV AATLP GL+SV+ ++K+FPSA + T + H+ K L I L+ K +K V++ L + + ++G EG+ K MIFLN+ Q AL +A + +H + +R E L FR ++ +LVCTDLASRGLD+PDV VIQ++FA NVV HLHR+GR R ++GR + F+ E LV ++ A E+ + ++FSR+RGF KK KK R Sbjct: 35 SQNDWESLITSPVLLQRLQSELPTIYRSGPSEIQSLAFSSVQEGRNVILGAETGTGKTLAYLLPWMN------------------------AVL---------EERLTKDSNQWDAVQAFAKAVVLVPNKELVQQVVRMALPLAGGPSALVYDGKVLQENDNDDDSLIRLAVLPGGMDEPNDFAPFRRCTKPL-DLIVSTPAALGPWALNPKHVAIFADIQSLIVDEADMLLDGGYVRALEQVLMGFRRADRTIHSTEQRP-TQYVFVAATLPDSGLRSVDAYLKKKFPSAEYITT--ANLHNAKHEGLLETQWIALESKQERMKAVVEMLSQHQQ----QQGSEGE--------------KIMIFLNSVQDVENASAALQRAGVSVLRYHAKLNLQERTETLEAFRQSTANGQSSILVCTDLASRGLDVPDVTLVIQLQFATNVVTHLHRMGRCGRRNHSKKGRGIIFFSEQEEPLVNVVRQAEEQQEKMTLQQDVMEELTDDFDADENASQPSPSDLAKVQQAFSRKRGFTKKRKKLRR 520
BLAST of NO01G00820 vs. NCBI_GenBank
Match: XP_023973742.1 (DEAD-box ATP-dependent RNA helicase 22-like, partial [Physeter catodon]) HSP 1 Score: 216.5 bits (550), Expect = 2.600e-52 Identity = 147/394 (37.31%), Postives = 202/394 (51.27%), Query Frame = 0 Query: 256 DNRLTPLAEDFPW--ETPFAIVLVPNRQLSEQVLQMGRELLTQQKGEGEREGRPRIDALAGSVEEWPFHPKTRP-APDVLVCTPATLSFFDR------DIGLFSRVGMVVVDEADMLLEGDYGRHLDRILVAFKRADKLHVIRSEPSTQYVLAAATLPTYGLKSVEELVRKRFPSAMRVNTDMMHRHHPKLTQLFVE--APIGLDEKIGMLKKVLQRLQEKGRALAAKEGGEGKEDXXXXXXXXXXXXKTMIFLNTAQAAARVHDALAQADFPSVA----FHKDIRSSDREENLRQFRSNSVPLLVCTDLASRGLDIPDVKQVIQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDEGSTDLVESLQLAG----EESLDRSFSRQRGFRKKVKK 631 ++ T ED P P+AI++VP R+L+ QV R L R+ L GS WPF T P +PDV++CTP L+ F R + LF + M+V+DEADMLLEG Y + ++ + + F++AD++ + TQYV AAAT+P G S+ + + P A + T+ +H +L Q FVE A +K +L L++LQE A + MIF NTAQ A +V L Q P A F D+ DR NL F +LVCTD ASRGLDI V VIQ +FA N V HLHR+GR RAG+ GRA+NFY+ S LV++++ A SL +FSR+R FRK +K+ Sbjct: 7 EDEATMKREDLPLPRHYPYAIIVVPTRELALQVAAWSRRLC--------RKSPVSTQLLLGSYARWPFGTLTLPTSPDVILCTPQVLAGFTRGGGYKKKLSLFEQAQMLVIDEADMLLEGGYKKLMESVFLEFRKADRMLAATGKRRTQYVFAAATIPERGPVSIRKTIDVLCPGASFLCTNSLHHQRRELQQEFVEIRADASFGDKTDLL---LEKLQEIPLA-----------------------ERVMIFCNTAQTAKQVLQVL-QKTLPPAANPKLFSSDLNQQDRARNLGLFAREKSKVLVCTDAASRGLDIVGVTTVIQFDFALNAVTHLHRVGRVARAGKFGRAINFYEPVSKPLVDAVRQAAYDPTRRSLADTFSRRRSFRKNLKR 365
BLAST of NO01G00820 vs. NCBI_GenBank
Match: XP_003881282.1 (putative RNA helicase [Neospora caninum Liverpool] >CBZ51249.1 putative RNA helicase [Neospora caninum Liverpool]) HSP 1 Score: 216.1 bits (549), Expect = 3.400e-52 Identity = 139/378 (36.77%), Postives = 200/378 (52.91%), Query Frame = 0 Query: 267 PWETPFAIVLVPNRQLSEQVLQMGRELLTQQKGEGEREGRPRIDALAGSVEEWPFHPKTRP-APDVLVCTPATLSFF-----DRDIGLFSRVGMVVVDEADMLLEGDYGRHLDRILVAFKRADKLHVIRSEPSTQYVLAAATLPTYGLKSVEELVRKRFPSAMRVNTDMMHRHHPKLTQLFVEAPIGL--DEKIGMLKKVLQRLQEKGRALAAKEGGEGKEDXXXXXXXXXXXXKTMIFLNTAQAAARVHDALAQADFPSV---AFHKDIRSSDREENLRQFRSNSVPLLVCTDLASRGLDIPDVKQVIQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDEGSTDLVESLQLAGEE----SLDRSFSRQRGFRKKVK 630 P P+A+V+VP R+L+ QV+ R L R+ + G+ WPF P +PD++VCTP L+ F +D+ F + M+ +DEADMLLEG Y + ++ I AF+RAD+ TQY+ AAAT+P G KSV +++ + P A T+ +H+H +L Q FVE P G+ DE++ +L L++L GG+ K MIF NTAQ A + +AL +A P+ F +I DR NL F +LVCTD ASRGLDI V V+Q +FA + V HLHR+GR R GRA+NFY + LV+ ++ A + S+ +FSR+R FRKK++ Sbjct: 20 PRHHPYAVVIVPTRELALQVVAWARRLC--------RKSPITAQLMLGTYTRWPFGTLAIPTSPDLVVCTPPVLAPFVKGGHAKDLTPFREIQMLALDEADMLLEGGYRQAMEGIFTAFRRADRQSAASGRRRTQYIFAAATIPDRGPKSVRKIISRLCPRATFFCTESLHQHREQLQQEFVEVPAGISDDERVNLLLSRLKKL-----------GGD---------------DKVMIFCNTAQIARSLFEALEKA-LPTTRPKLFSSEIDQKDRSFNLGLFARGKSRILVCTDAASRGLDIAGVTLVVQYDFALSAVAHLHRVGRVARGEHPGRALNFYFDSQRALVDVIRRAARDPVSPSVADAFSRKRSFRKKLR 362
BLAST of NO01G00820 vs. NCBI_GenBank
Match: GAX11481.1 (hypothetical protein FisN_22Lh166 [Fistulifera solaris]) HSP 1 Score: 214.5 bits (545), Expect = 1.000e-51 Identity = 172/538 (31.97%), Postives = 256/538 (47.58%), Query Frame = 0 Query: 157 AQVPFASLGLSPWLVSALNAAGKPI----STHIQALSLPSILEGNDVVIGSETGAGKTLAYLLPVLDLAHRAAPARTEAQIREMEYYMERKAALKGGAAGWEGDNRLTPLAEDFPWETPFAIVLVPNRQLSEQVLQMGRELLTQQKG----------EGEREGRPRIDALAGSVEE----WPFHPKTRPAPDVLVCTPATL---SFFDRDIGLFSRVGMVVVDEADMLLEGDYGRHLDRILVAFKRADK-LHVIRSEPSTQYVLAAATLPTYGLKSVEELVRKRFPSAMRVNTDMMHRHHPKLTQLFVEAPIGLDEKIGMLKKVLQRLQEKGRALAAKEGGEGKEDXXXXXXXXXXXXKTMIFLNTAQAAARVHDALAQADFPSVAFHKDIRSSDREENLRQFRSNSV----PLLVCTDLASRGLDIPDVKQVIQVEFAPNVVQHLHRIGRAVRA--GREGRAVNFYDEGSTDLVESLQLAGEE---------------------------------SLDRSFSRQRGFRKKVKKYGR 634 +Q + SL SP L+ L + I + IQ+L+ S+ EG +V++G+ETG GKTLAYLLP ++ +Q ++ Y + A+VLVPN++L +QV++M L E + R+ L G ++E PF T+P D++V TPA L + + + F+ + ++VDEADMLL+G Y R L+++L+ F+RAD+ +H P TQYV AATLP GL+SV+ ++K+FPSA + T + H+ K L I L+ K +K V++ L +L ++ E K MIFLN+ Q AL +A + +H + +R E L FR ++ +LVCTDLASRGLD+PDV VIQ++FA NVV HLHR+GR R ++GR + FY E LV ++ A E+ + ++FSR+RGF KK KK R Sbjct: 35 SQNDWTSLITSPILLQRLQSELPTIYRSGPSEIQSLAFSSLQEGRNVILGAETGTGKTLAYLLPWMNAVLEERARTNSSQWDAVQAYAK-------------------------------AVVLVPNKELVQQVVRMALPLAGGPSALMYDGKVLQENDEDDSLIRLAVLPGGMDEPNDFAPFRRCTKPL-DLIVSTPAALGPWALNPKHVAFFADIQTLIVDEADMLLDGGYVRALEQVLMGFRRADRTIHSTEQRP-TQYVFVAATLPDSGLRSVDAYLKKKFPSAEYITT--ANLHNAKHEGLLETQWIALESKQERMKAVVEML-----SLHQQQHDTDGE-------------KIMIFLNSVQDVENASAALQRAGISVLKYHAKLNLQERTETLETFRQSTAKGQSSILVCTDLASRGLDVPDVTLVIQLQFATNVVTHLHRMGRCGRRNHSKKGRGIIFYSEKEEPLVNVVRQAEEQQEKMILQQDVMEELTDYSDAEENVTQPLSSDLAKVQQAFSRKRGFTKKRKKLRR 519
BLAST of NO01G00820 vs. NCBI_GenBank
Match: XP_002180275.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48466.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 212.6 bits (540), Expect = 3.800e-51 Identity = 177/540 (32.78%), Postives = 258/540 (47.78%), Query Frame = 0 Query: 161 FASLGL-SPWLVSALNAAGKPISTHIQALSLPSILEG-NDVVIGSETGAGKTLAYLLPVLDLAHRAAPARTEAQIREMEYYMERKAALKGGAAGWEGDNRLTPLAEDFPWETPFAIVLVPNRQLSEQVLQMGREL-------------------LTQQKGEGEREGRPRIDALAGSVEE----WPFHPK-----TRPAPDVLVCTPATLSFF---DRDIGLFSRVGMVVVDEADMLLEGDYGRHLDRILVAFKRADKLHVIRSEPSTQYVLAAATLPTYGLKSVEELVRKRFPSAMRVNTDMMH--RHHPKLTQ-LFVEAPIGLDEKIGMLKKVLQRLQEKGRALAAKEGGEGKEDXXXXXXXXXXXXKTMIFLNTAQAAARVHDALAQADFPSVAFHKDIRSSDREENLRQFR---------SNSVPLLVCTDLASRGLDIPDVKQVIQVEFAPNVVQHLHRIGRAVRAG-REGRAVNFYDEGSTDLVESLQ-----------------LAGEE---SLDRSFSRQRGFRKKVKKYGRD 635 FASLG+ SP L+ + A G T +QA + I DV++G+ETG GKTLAYLLP+LD ++RKA + T L D+ AI+LVPN++L +QV++M L L + R+ L G + E PF + P D+++ T A L +I +F + +VVDEADMLL+G Y R L+ +L+ F+RAD+L P TQ+V AATLP +G +SV+ ++K+FP +V MH RH+ Q L++E + K ++K+++ EGG E K M+FLN+ + AL +A + +H + +R L +FR +VP+LVC+DLA+RG+D+P V V+Q++FA NVV HLHR+GR RAG R GR + FYD +LVE +Q LAG+E S+ +FSR+RGF KK KK ++ Sbjct: 92 FASLGIQSPVLLERIEALGLRRPTAVQAAAYRDISAAEGDVMVGAETGTGKTLAYLLPLLD------------------DILQRKA---------NAADTNTSLGYDY----ARAIILVPNKELVQQVVRMAVSLSGGRQSLVYGGSALPDAANLPPTDDATLAKDTVRLAILPGGLRELQDFQPFRKAIGLGGSEPPVDLVISTLAALGVLGLKPANIDMFGDIRTLVVDEADMLLDGGYIRPLENVLMGFRRADRLDPTLGVPRTQHVFVAATLPDFGTRSVDAYLKKKFPYVSQVTMAGMHNARHYGLREQTLWMEE----ESKKTRMEKLVELF-----GTPVTEGGLQDE-------------KVMVFLNSVDDVEGANQALQRAGLKVLPYHAKVSLDERTATLDRFRRYDPKSPDGEGTVPILVCSDLAARGIDVPGVNTVVQLQFAGNVVAHLHRMGRCGRAGQRTGRGIVFYDAKERELVEVVQQAEIQQNRMVLPGDVIELAGDEQDGSVKNAFSRKRGFSKKRKKLRKE 578
BLAST of NO01G00820 vs. NCBI_GenBank
Match: XP_012479438.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 22 isoform X2 [Gossypium raimondii] >KJB31317.1 hypothetical protein B456_005G186000 [Gossypium raimondii]) HSP 1 Score: 208.0 bits (528), Expect = 9.300e-50 Identity = 174/565 (30.80%), Postives = 260/565 (46.02%), Query Frame = 0 Query: 149 PANTG--TFGAQ--VPFASLGLSPWLVSALNAAGKPISTHIQALSLPSILEGNDVVIGSETGAGKTLAYLLPVLDLAHRAAPARTEAQIREMEYYMERKAALKGGAAGWEGDNRLTPLAEDFPWETPFAIVLVPNRQLSEQVLQMGRELLTQQKGEGEREGRP--RIDALAGSVEEWPFHPKTRPAPDVLVCTP-ATLSFFD----RDIGLFSRVGMVVVDEADMLLEGDYGRHLDRIL-------------------------------------------------------------------VAFKRADKLHVIRS-EPSTQYVLAAATLPTYGLKSVEELVRKRFPSAMRVNTDMMHRHHPKLTQLFVEAPIGLDEKIGMLKKVLQRLQEKGRALAAKEGGEGKEDXXXXXXXXXXXXKTMIFLNTAQAAARVHDALAQADFPSVAFHKDIRSSDREENLRQFRSNSVPLLVCTDLASRGLDIPDVKQVIQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDEGSTDLVESLQLAGE--ESLDRSFSRQRGFRKKVKKYG 633 P NTG TF A+ V + SLGLS + AL++AG + +QA +PSIL G DVVI +ETG+GKT YL+P++D + AG + DN L F+IVL PN L EQV++M +L G+ +GRP R+ A+ G + WP + PDV+V TP A L+ D V VV DEADMLL G + H+ R++ KR D V ++ E S QY+ AATLP G K+ +++K P A V+ +H+H+P+L + ++E + D ++ L + +++ K A + G G +TM+F NT +A V + L +A +H + ++R E+L FR+ + VCTD A+RG+DIP+V VIQ +FA + V LHR+GR RAG+ G + Y+E + DLV +++ AG+ + ++ +FSR+R FR K+KK G Sbjct: 66 PKNTGTDTFFAEDTVSWQSLGLSDRISQALSSAGFDRPSLVQAACMPSILSGKDVVIAAETGSGKTYGYLVPLIDKLY---------------------------GAGHDADNDLEKATVS---SRTFSIVLCPNVLLCEQVVRMANDL------SGD-DGRPLLRVAAVCGR-QGWPVN-----EPDVIVSTPVALLNSIDPKKHHRSDFIRAVKYVVFDEADMLLSGGFENHVIRLIHMLRFDEKLLSRVNKAGSENPVEPSSDSVSHFDFEGEEDMQNESISEAEEMSEGDVDAEDLMEETQTSPVKRKDWRRVRKNYERSKQYIFVAATLPVNGKKTAGAVLKKMVPDANWVSGSYLHQHNPRLKEKWIE--VTTDNQVDALIEAVKQFGSK-----ASDHGAG-------------VSRTMVFGNTVEAVEAVANILQRAGIECYRYHTGLSLAERAESLDDFRAKG-GIFVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRVGRTARAGQFGVVTSLYNESNRDLVNAIRAAGKLGQPVEAAFSRKRSFRNKLKKRG 566
BLAST of NO01G00820 vs. NCBI_GenBank
Match: XP_017607750.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 22 isoform X2 [Gossypium arboreum]) HSP 1 Score: 207.2 bits (526), Expect = 1.600e-49 Identity = 173/565 (30.62%), Postives = 260/565 (46.02%), Query Frame = 0 Query: 149 PANTG--TFGAQ--VPFASLGLSPWLVSALNAAGKPISTHIQALSLPSILEGNDVVIGSETGAGKTLAYLLPVLDLAHRAAPARTEAQIREMEYYMERKAALKGGAAGWEGDNRLTPLAEDFPWETPFAIVLVPNRQLSEQVLQMGRELLTQQKGEGEREGRP--RIDALAGSVEEWPFHPKTRPAPDVLVCTP-ATLSFFD----RDIGLFSRVGMVVVDEADMLLEGDYGRHLDRIL-------------------------------------------------------------------VAFKRADKLHVIRS-EPSTQYVLAAATLPTYGLKSVEELVRKRFPSAMRVNTDMMHRHHPKLTQLFVEAPIGLDEKIGMLKKVLQRLQEKGRALAAKEGGEGKEDXXXXXXXXXXXXKTMIFLNTAQAAARVHDALAQADFPSVAFHKDIRSSDREENLRQFRSNSVPLLVCTDLASRGLDIPDVKQVIQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDEGSTDLVESLQLAGE--ESLDRSFSRQRGFRKKVKKYG 633 P NTG TF A+ V + SLGLS + AL+ AG + +QA +PSIL G DVVI +ETG+GKT YL+P++D + A + DN L F+IVL PN L EQV++M +L G+ +GRP R+ A+ G + WP + PDV+V TP A L+ D V VV DEADMLL G + H+ R++ KR D + V ++ E S QY+ AATLP G K+ +++K FP A V+ +H+H+P+L + ++E + D ++ L + +++ K A + G G +TM+F NT +A V + L +A +H + ++R E+L FR+ + VCTD A+RG+DIP+V VIQ +FA + + LHR+GR RAG+ G + Y+E + DLV +++ AG+ + ++ +FSR+R FR K+KK G Sbjct: 66 PKNTGTDTFFAEDTVSWQSLGLSDRISQALSNAGFDRPSLVQAACMPSILSGKDVVIAAETGSGKTYGYLVPLIDKLY---------------------------GARHDADNDLEKATVS---SRTFSIVLCPNVLLCEQVVRMANDL------SGD-DGRPILRVAAVCGR-QGWPVN-----EPDVIVSTPVALLNSIDPKKHHRSDFIRAVKYVVFDEADMLLSGGFENHVIRLIHMLRFDEKLLSRVNKAGSENPVEPSSDSVSHFDFEGEEDMQNESISEAEEMSEGDVDAQDLMEETQTSTVKRKDWMRVRKNYERSKQYIFVAATLPVNGKKTAGAVLKKMFPDANWVSGSYLHQHNPRLKEKWIE--VTTDNQVDALIEAVKQFGSK-----ALDHGAG-------------VSRTMVFGNTVEAVEAVANILQRAGIECYRYHTGLSLAERAESLDDFRAKG-GIFVCTDAAARGVDIPNVSHVIQADFATSAIDFLHRVGRTARAGQFGVVTSLYNESNRDLVNAIRAAGKLGQPVEAAFSRKRSFRNKLKKRG 566 The following BLAST results are available for this feature:
BLAST of NO01G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00820 ID=NO01G00820|Name=NO01G00820|organism=Nannochloropsis oceanica|type=gene|length=2746bpback to top protein sequence of NO01G00820.1 >NO01G00820.1-protein ID=NO01G00820.1-protein|Name=NO01G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=683bpback to top Synonyms
Publications
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