NO01G00760, NO01G00760 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G00760
Unique Name	NO01G00760
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2406
Alignment location	chr1:193240..195645 -

Link to JBrowse

Properties


Property Name	Value
Description	Squalene epoxidase-like protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:193240..195645 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0050660	flavin adenine dinucleotide binding
GO:0004506	squalene monooxygenase activity
GO:0071949	FAD binding
GO:0000166	nucleotide binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process
GO:0008152	metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036188	FAD/NAD-bd_sf
IPR013698	Squalene_epoxidase
IPR002938	mOase_FAD-bd

Homology

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BLAST of NO01G00760 vs. NCBI_GenBank
Match: CBI33260.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 349.7 bits (896), Expect = 2.200e-92
Identity = 231/572 (40.38%), Postives = 305/572 (53.32%), Query Frame = 0

Query:  158 RQAPSAGQTIIVVGAGTAGAAAAVGLAERGFKVLLFERDMTLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVGVEGYVVFRPHKLEVEGGEEEVVKNIMLNYPAYDPASMKELFGVIDPCVSPXXXXXXXXXXXXXIPPSTEEVHGAGKTLSPHSITKARKTAGAVATAATTVAQEHEPLRPKGRSFHNGRFVQRLRERALAEKNVTVIQGIVSRLVHEEDLTEGAKEGREKGKKQRVVGVEYKIETGRTLTNEEGVEVPEKETRRALAPLTIVADGLWSSLRTHVDKCAKPHQLSSFVGLIITHPFMSSPLPHAHCGHVVLAEPSPVLLYQISSTETRVLVDIHG-KLPSASTGELASHLYTHILPQLPPCLQAPFAEAVARGNFKSMPNRAMPAAKLAKDGVILLGDALNMRHPLTGGGMTVALRDVEALCYLLEEPTADLTNPVAFRALKKRFATERKSWAATINVLANALHAVFSTPDGDLTRKDLRDACFDYLSIGGYCAGGPINLLSGLTPRPSILAMHFFLVAFHGVGKYVWPFPTLGGMVRMYDMLHVACQIIMPLLTVEG 729
            RQ    G  II+VGAG AG+A A  L + G +V + ERD+T  DRIVGELLQPGG   L  LGL++C +E ID+  V GY +F+      +G      KN  L+YP                                      E+ H                         + VA         GRSFHNGRF+QR+RE+A    NV + QG V+ L+ E                  + GV+YK + G+ L              +A APLTIV DG +S+LR  +    K    S FVGL++     +  LP A+ GHV+LA+PSP+L Y ISSTE R LVD+ G KLPS + GE+A+HL T + PQLPP L   F  A+ +G  ++MPNR+MPA      G +L+GDA NMRHPLTGGGMTVAL D+  L  LL +P ++L + V+     + F T RK  A+TIN LA AL+ VF     D  R ++R+ACFDYLS+GG C+ GP+ LLSGL PRP  L +HFF VA +GVG+ + PFP+L  +     ++  A  II P++  EG
Sbjct:   51 RQDDGFGTDIIIVGAGVAGSALAHTLGKDGRRVHIIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVEE-IDAQRVLGYALFK------DG------KNTRLSYP-------------------------------------LEKFH-------------------------SDVA---------GRSFHNGRFIQRMREKAAFLSNVRMEQGTVTSLLEENG---------------TIKGVQYKTKAGQEL--------------KAYAPLTIVCDGCFSNLRRSLCN-PKVDVPSCFVGLVLE----NCQLPFANHGHVILADPSPILFYPISSTEVRCLVDVPGQKLPSIANGEMANHLKTRVAPQLPPQLYDAFISAIDQGKIRTMPNRSMPADPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRDLL-KPLSNLNDAVSLSKYLESFYTLRKPVASTINTLAGALYKVFCA-STDQARTEMREACFDYLSLGGICSAGPVALLSGLNPRPLSLVVHFFAVAIYGVGRLLLPFPSLKRLWIGARLISAASSIIFPIIKAEG 502

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BLAST of NO01G00760 vs. NCBI_GenBank
Match: XP_003080880.2 (Aromatic-ring hydroxylase-like [Ostreococcus tauri] >CEG01552.1 Aromatic-ring hydroxylase-like [Ostreococcus tauri])

HSP 1 Score: 349.7 bits (896), Expect = 2.200e-92
Identity = 231/585 (39.49%), Postives = 311/585 (53.16%), Query Frame = 0

Query:  167 IIVVGAGTAGAAAAVGLAERGFKVLLFERDMTLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVGVEGYVVFRPHKLEVEGGEEEVVKNIMLNYPAYDPASMKELFGVIDPCVSPXXXXXXXXXXXXXIPPSTEEVHGAGKTLSPHSITKARKTAGAVATAATTVAQEHEPLRPKGRSFHNGRFVQRLRERALAEKNVTVIQGIVSRLVHEEDLTEGAKEGREKGKKQRVVGVEYKIETGRTLTNEEGVEVPE---KETRRALAPLTIVADGLWSSLRTHVDKCAKPHQLSSFVGLIITHPFMSSPLPHAHCGHVVLAEPSPVLLYQISSTETRVLVDIHG--KLPSASTGELASHLYTHILPQLPPCLQAPFAEAVARGNFKSMPNRAMPAAKLAKDGVILLGDALNMRHPLTGGGMTVALRDVEALCYLLEEPTADLTNPVAFRALKKRFATERKSWAATINVLANALHAVFSTPDGDLTRKDLRDACFDYLSIGGYCAGGPINLLSGLTPRPSILAMHFFLVAFHGVGKYVWPFPTLGGMVRMYDMLHVACQIIMPLLTVEG--STVLASWPVRTAIGVV 745
            +++VGAG AGA+ A GL   G +VL+ ERDM+  DRIVGELLQPGG   L+ LGL  C  EGID+  V GY +F+        GE        + YP                                 +   T++V                                       GRSFHNGRFVQ+LRE+A+  + VT+IQG V +L+++       ++G      QRV GV Y +  G T   E+   V +    +T    APLT+V DG +SSLRT +   + P+  S FVG+I+     +  LP+ H GHVVL +PSPVL Y ISSTE R LVDI    K+PS + GE+A ++   I+PQ+P  L+    +AV  G F+SMPN+ M A      G +LLGDA NMRHPLTGGGMTVAL D+     +L  P  + ++  A  A    F   R   A TIN LANAL+AVF + DGD +  ++R ACF+YL +GG  A GPI LLSGL P P  L +HFF VA  G+G+ + P PT   +++  ++L  AC+II P++  EG       +W VRT +G++
Sbjct:   26 VVIVGAGVAGASLAHGLGVEGRRVLVIERDMSTPDRIVGELLQPGGYVKLKELGLASCV-EGIDAQKVYGYTMFK-------NGEVAT-----MTYP---------------------------------LEGRTDDV--------------------------------------AGRSFHNGRFVQKLREKAMEVEGVTIIQGTVKKLLNDRGEEWSGEDG------QRVAGVSYTV-GGETWDKEKNALVRDASTMQTHAVYAPLTVVCDGHFSSLRTKLSPKSTPNHPSHFVGVILKGA-PNDLLPNGHHGHVVLGDPSPVLFYPISSTEVRCLVDIPASVKMPSVAKGEMAKYVLEKIVPQVPEKLRPHLVKAVEEGRFRSMPNKTMAAKPSRTPGAVLLGDAFNMRHPLTGGGMTVALNDISTFKSML-SPLPNFSDSKATAAKLDEFYRHRTRPALTINTLANALYAVFCS-DGDSSMDEMRQACFEYLRLGGTYARGPIALLSGLDPNPLNLVIHFFSVALFGIGRLMVPLPTPERLLKSGNILTGACKIIFPIVKGEGFARMFFPAW-VRTKMGII 515

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BLAST of NO01G00760 vs. NCBI_GenBank
Match: XP_003635346.2 (PREDICTED: squalene epoxidase 3 [Vitis vinifera])

HSP 1 Score: 349.7 bits (896), Expect = 2.200e-92
Identity = 231/572 (40.38%), Postives = 305/572 (53.32%), Query Frame = 0

Query:  158 RQAPSAGQTIIVVGAGTAGAAAAVGLAERGFKVLLFERDMTLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVGVEGYVVFRPHKLEVEGGEEEVVKNIMLNYPAYDPASMKELFGVIDPCVSPXXXXXXXXXXXXXIPPSTEEVHGAGKTLSPHSITKARKTAGAVATAATTVAQEHEPLRPKGRSFHNGRFVQRLRERALAEKNVTVIQGIVSRLVHEEDLTEGAKEGREKGKKQRVVGVEYKIETGRTLTNEEGVEVPEKETRRALAPLTIVADGLWSSLRTHVDKCAKPHQLSSFVGLIITHPFMSSPLPHAHCGHVVLAEPSPVLLYQISSTETRVLVDIHG-KLPSASTGELASHLYTHILPQLPPCLQAPFAEAVARGNFKSMPNRAMPAAKLAKDGVILLGDALNMRHPLTGGGMTVALRDVEALCYLLEEPTADLTNPVAFRALKKRFATERKSWAATINVLANALHAVFSTPDGDLTRKDLRDACFDYLSIGGYCAGGPINLLSGLTPRPSILAMHFFLVAFHGVGKYVWPFPTLGGMVRMYDMLHVACQIIMPLLTVEG 729
            RQ    G  II+VGAG AG+A A  L + G +V + ERD+T  DRIVGELLQPGG   L  LGL++C +E ID+  V GY +F+      +G      KN  L+YP                                      E+ H                         + VA         GRSFHNGRF+QR+RE+A    NV + QG V+ L+ E                  + GV+YK + G+ L              +A APLTIV DG +S+LR  +    K    S FVGL++     +  LP A+ GHV+LA+PSP+L Y ISSTE R LVD+ G KLPS + GE+A+HL T + PQLPP L   F  A+ +G  ++MPNR+MPA      G +L+GDA NMRHPLTGGGMTVAL D+  L  LL +P ++L + V+     + F T RK  A+TIN LA AL+ VF     D  R ++R+ACFDYLS+GG C+ GP+ LLSGL PRP  L +HFF VA +GVG+ + PFP+L  +     ++  A  II P++  EG
Sbjct:  130 RQDDGFGTDIIIVGAGVAGSALAHTLGKDGRRVHIIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVEE-IDAQRVLGYALFK------DG------KNTRLSYP-------------------------------------LEKFH-------------------------SDVA---------GRSFHNGRFIQRMREKAAFLSNVRMEQGTVTSLLEENG---------------TIKGVQYKTKAGQEL--------------KAYAPLTIVCDGCFSNLRRSLCN-PKVDVPSCFVGLVLE----NCQLPFANHGHVILADPSPILFYPISSTEVRCLVDVPGQKLPSIANGEMANHLKTRVAPQLPPQLYDAFISAIDQGKIRTMPNRSMPADPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRDLL-KPLSNLNDAVSLSKYLESFYTLRKPVASTINTLAGALYKVFCA-STDQARTEMREACFDYLSLGGICSAGPVALLSGLNPRPLSLVVHFFAVAIYGVGRLLLPFPSLKRLWIGARLISAASSIIFPIIKAEG 581

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BLAST of NO01G00760 vs. NCBI_GenBank
Match: OUS47061.1 (squalene epoxidase-domain-containing protein [Ostreococcus tauri])

HSP 1 Score: 349.7 bits (896), Expect = 2.200e-92
Identity = 231/585 (39.49%), Postives = 311/585 (53.16%), Query Frame = 0

Query:  167 IIVVGAGTAGAAAAVGLAERGFKVLLFERDMTLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVGVEGYVVFRPHKLEVEGGEEEVVKNIMLNYPAYDPASMKELFGVIDPCVSPXXXXXXXXXXXXXIPPSTEEVHGAGKTLSPHSITKARKTAGAVATAATTVAQEHEPLRPKGRSFHNGRFVQRLRERALAEKNVTVIQGIVSRLVHEEDLTEGAKEGREKGKKQRVVGVEYKIETGRTLTNEEGVEVPE---KETRRALAPLTIVADGLWSSLRTHVDKCAKPHQLSSFVGLIITHPFMSSPLPHAHCGHVVLAEPSPVLLYQISSTETRVLVDIHG--KLPSASTGELASHLYTHILPQLPPCLQAPFAEAVARGNFKSMPNRAMPAAKLAKDGVILLGDALNMRHPLTGGGMTVALRDVEALCYLLEEPTADLTNPVAFRALKKRFATERKSWAATINVLANALHAVFSTPDGDLTRKDLRDACFDYLSIGGYCAGGPINLLSGLTPRPSILAMHFFLVAFHGVGKYVWPFPTLGGMVRMYDMLHVACQIIMPLLTVEG--STVLASWPVRTAIGVV 745
            +++VGAG AGA+ A GL   G +VL+ ERDM+  DRIVGELLQPGG   L+ LGL  C  EGID+  V GY +F+        GE        + YP                                 +   T++V                                       GRSFHNGRFVQ+LRE+A+  + VT+IQG V +L+++       ++G      QRV GV Y +  G T   E+   V +    +T    APLT+V DG +SSLRT +   + P+  S FVG+I+     +  LP+ H GHVVL +PSPVL Y ISSTE R LVDI    K+PS + GE+A ++   I+PQ+P  L+    +AV  G F+SMPN+ M A      G +LLGDA NMRHPLTGGGMTVAL D+     +L  P  + ++  A  A    F   R   A TIN LANAL+AVF + DGD +  ++R ACF+YL +GG  A GPI LLSGL P P  L +HFF VA  G+G+ + P PT   +++  ++L  AC+II P++  EG       +W VRT +G++
Sbjct:   24 VVIVGAGVAGASLAHGLGVEGRRVLVIERDMSTPDRIVGELLQPGGYVKLKELGLASCV-EGIDAQKVYGYTMFK-------NGEVAT-----MTYP---------------------------------LEGRTDDV--------------------------------------AGRSFHNGRFVQKLREKAMEVEGVTIIQGTVKKLLNDRGEEWSGEDG------QRVAGVSYTV-GGETWDKEKNALVRDASTMQTHAVYAPLTVVCDGHFSSLRTKLSPKSTPNHPSHFVGVILKGA-PNDLLPNGHHGHVVLGDPSPVLFYPISSTEVRCLVDIPASVKMPSVAKGEMAKYVLEKIVPQVPEKLRPHLVKAVEEGRFRSMPNKTMAAKPSRTPGAVLLGDAFNMRHPLTGGGMTVALNDISTFKSML-SPLPNFSDSKATAAKLDEFYRHRTRPALTINTLANALYAVFCS-DGDSSMDEMRQACFEYLRLGGTYARGPIALLSGLDPNPLNLVIHFFSVALFGIGRLMVPLPTPERLLKSGNILTGACKIIFPIVKGEGFARMFFPAW-VRTKMGII 513

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BLAST of NO01G00760 vs. NCBI_GenBank
Match: AFI33133.2 (squalene epoxidase 1 [Eriobotrya japonica])

HSP 1 Score: 349.0 bits (894), Expect = 3.700e-92
Identity = 231/568 (40.67%), Postives = 301/568 (52.99%), Query Frame = 0

Query:  162 SAGQTIIVVGAGTAGAAAAVGLAERGFKVLLFERDMTLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVGVEGYVVFRPHKLEVEGGEEEVVKNIMLNYPAYDPASMKELFGVIDPCVSPXXXXXXXXXXXXXIPPSTEEVHGAGKTLSPHSITKARKTAGAVATAATTVAQEHEPLRPKGRSFHNGRFVQRLRERALAEKNVTVIQGIVSRLVHEEDLTEGAKEGREKGKKQRVVGVEYKIETGRTLTNEEGVEVPEKETRRALAPLTIVADGLWSSLRTHVDKCAKPHQLSSFVGLIITHPFMSSPLPHAHCGHVVLAEPSPVLLYQISSTETRVLVDIHG-KLPSASTGELASHLYTHILPQLPPCLQAPFAEAVARGNFKSMPNRAMPAAKLAKDGVILLGDALNMRHPLTGGGMTVALRDVEALCYLLEEPTADLTNPVAFRALKKRFATERKSWAATINVLANALHAVFSTPDGDLTRKDLRDACFDYLSIGGYCAGGPINLLSGLTPRPSILAMHFFLVAFHGVGKYVWPFPTLGGMVRMYDMLHVACQIIMPLLTVEG 729
            ++G  +++VGAG AGAA A  LA+ G +V + ERD++  DRIVGELLQPGG   L  LGL++CA E ID+  V GY +++      +G + +      L+YP                                                                        E+ P    GRSFHNGRF+Q++RERA A  NVT+ QG V+ L+ E               K  V GV YK + G              E  R+ APLTIV DG +S+LR ++    K    S FVGLI+     +  LPHA+ GHV+L +PSP+L Y IS TE R LVD+ G K+PS + GE+A +L   + PQ+PP L   F  AV +GN ++M N++MPAA     G ILLGDA NMRHPLTGGGMTVAL D+  L  LL  P  DL +  A     + F T RK  ++TIN LA AL+ VF     D  RK++R+ACFDYLS+GG CA GPI+LLSGL PRP  L +HFF VA +GVG+ + PFPT   +     +L  A  II P++  EG
Sbjct:   42 ASGTDVVIVGAGVAGAALAYTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCANESIDAQKVFGYALYK------DGNDTK------LSYPL-----------------------------------------------------------------------ENYPSDIAGRSFHNGRFIQKMRERATALINVTLEQGTVTNLIEE---------------KGTVKGVMYKNKAG--------------EEMRSYAPLTIVCDGCFSNLRRNL-STPKVDNPSCFVGLILE----NCELPHANHGHVILGDPSPILFYPISGTEVRCLVDVPGTKVPSVANGEMAKYLKNVVAPQVPPQLLKSFLAAVEKGNIRTMQNKSMPAAPQPTPGAILLGDAFNMRHPLTGGGMTVALSDIVLLRDLL-RPLTDLNDAPALCEYLESFYTLRKPVSSTINTLAGALYKVFCA-SPDPARKEMREACFDYLSLGGICARGPISLLSGLNPRPIHLFLHFFAVAVYGVGRLMIPFPTPKRVWLGTRLLLGASGIIFPIIKGEG 490

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BLAST of NO01G00760 vs. NCBI_GenBank
Match: OMP01755.1 (Aromatic-ring hydroxylase-like protein [Corchorus olitorius])

HSP 1 Score: 348.6 bits (893), Expect = 4.900e-92
Identity = 234/589 (39.73%), Postives = 309/589 (52.46%), Query Frame = 0

Query:  142 EMLFRSGGVGGNRI-PPRQAPSAGQTIIVVGAGTAGAAAAVGLAERGFKVLLFERDMTLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVGVEGYVVFRPHKLEVEGGEEEVVKNIMLNYPAYDPASMKELFGVIDPCVSPXXXXXXXXXXXXXIPPSTEEVHGAGKTLSPHSITKARKTAGAVATAATTVAQEHEPLRPKGRSFHNGRFVQRLRERALAEKNVTVIQGIVSRLVHEEDLTEGAKEGREKGKKQRVVGVEYKIETGRTLTNEEGVEVPEKETRRALAPLTIVADGLWSSLRTHVDKCAKPHQLSSFVGLIITHPFMSSPLPHAHCGHVVLAEPSPVLLYQISSTETRVLVDIHG-KLPSASTGELASHLYTHILPQLPPCLQAPFAEAVARGNFKSMPNRAMPAAKLAKDGVILLGDALNMRHPLTGGGMTVALRDVEALCYLLEEPTADLTNPVAFRALKKRFATERKSWAATINVLANALHAVFSTPDGDLTRKDLRDACFDYLSIGGYCAGGPINLLSGLTPRPSILAMHFFLVAFHGVGKYVWPFPTLGGMVRMYDMLHVACQIIMPLLTVEG 729
            E   ++  V GN I    Q    G  +I+VGAG AGAA A  L + G +V + ERD+T  DRIVGELLQPGG   L  LGL++C  E ID+  V GY +F+      +G      +N  L+YP                                      E+ H                                      GRSFHNGRF+QR+RE+A    NV + QG V+ L+ E                  + GV+YK + G+ +              RA APLTIV DG +S+LR  + K  K    S FVGL++     +  LP ++ GHV+LA+PSP+L Y ISSTE R LVD+ G KLPS + GE+A++L T + PQ+PP L+  F  AV +GN ++MPNR+MPA      G +L+GDA NMRHPLTGGGMTVAL D+  L  LL +P  DL +  +     + F T RK  A+TIN LA AL+ VFS    D  RK++R ACFDYLS+GG  + GP+ LLSGL PRP  L +HFF VA +GVG+ + PFP+L  M   + ++  A  II P++  EG
Sbjct:   41 EYTIQTDAVNGNEIRESSQENGPGADVIIVGAGVAGAALAHTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLVELGLEDCV-EDIDAQRVLGYALFK------DG------RNTRLSYP-------------------------------------LEKFHS----------------------------------DVSGRSFHNGRFIQRMREKAATLPNVRLEQGTVTSLLEENG---------------TIRGVQYKTKDGQVI--------------RAYAPLTIVCDGCFSNLRRSLCK-PKVEVPSCFVGLVLE----NCNLPFSNHGHVILADPSPILFYPISSTEVRCLVDVPGQKLPSLANGEMANYLKTKVAPQVPPELKDAFIAAVDKGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRDLL-KPLHDLHDAASLTKYLESFYTLRKPVASTINTLAGALYKVFSA-SPDQARKEMRQACFDYLSLGGVFSSGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSLKRMWIGFRLILSASGIIFPIIKAEG 509

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BLAST of NO01G00760 vs. NCBI_GenBank
Match: PON32390.1 (FAD dependent oxidoreductase [Parasponia andersonii])

HSP 1 Score: 347.4 bits (890), Expect = 1.100e-91
Identity = 230/573 (40.14%), Postives = 303/573 (52.88%), Query Frame = 0

Query:  157 PRQAPSAGQTIIVVGAGTAGAAAAVGLAERGFKVLLFERDMTLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVGVEGYVVFRPHKLEVEGGEEEVVKNIMLNYPAYDPASMKELFGVIDPCVSPXXXXXXXXXXXXXIPPSTEEVHGAGKTLSPHSITKARKTAGAVATAATTVAQEHEPLRPKGRSFHNGRFVQRLRERALAEKNVTVIQGIVSRLVHEEDLTEGAKEGREKGKKQRVVGVEYKIETGRTLTNEEGVEVPEKETRRALAPLTIVADGLWSSLRTHVDKCAKPHQLSSFVGLIITHPFMSSPLPHAHCGHVVLAEPSPVLLYQISSTETRVLVDIHG-KLPSASTGELASHLYTHILPQLPPCLQAPFAEAVARGNFKSMPNRAMPAAKLAKDGVILLGDALNMRHPLTGGGMTVALRDVEALCYLLEEPTADLTNPVAFRALKKRFATERKSWAATINVLANALHAVFSTPDGDLTRKDLRDACFDYLSIGGYCAGGPINLLSGLTPRPSILAMHFFLVAFHGVGKYVWPFPTLGGMVRMYDMLHVACQIIMPLLTVEG 729
            PR+   +   +++VGAG AG+A A  L + G +V + ERD+T  DRIVGELLQPGG   L  LGL +C +E ID+  V GY +F+      +G      KN  L+YP                                      E+ H                         + VA         GRSFHNGRF+QR+RE+A    NV + QG V+ LV E                  + GV+YK   G+ L              +A APLT+V DG +S+LR  +    K    S FVGL++     +  LP A+ GHV+LA+PSP+L Y ISSTE R LVD+ G K+PS + GE+A +L T + PQ+PP +Q  F  AV +GN ++MPNR+MPA      G +L+GDA NMRHPLTGGGMTVAL D+  L  LL  P  DL +  +     + F T RK  A+TIN LA AL+ VFS    D  RK++R ACFDYLS+GG C+ GP+ LLSGL PRP  L +HFF VA +GVG+ + PFP+L  M     ++  A  II P++  EG
Sbjct:  143 PRRVSGSSTDVVIVGAGVAGSALAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLQDCVEE-IDAQRVLGYALFK------DG------KNTRLSYP-------------------------------------LEKFH-------------------------SDVA---------GRSFHNGRFIQRMREKAANLPNVRLEQGTVTSLVEENG---------------TIKGVQYKTRDGQEL--------------KAYAPLTVVCDGCFSNLRRSLCD-PKVEVPSCFVGLVLE----NCELPFANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSIANGEMAKYLKTVVAPQIPPEIQQSFIAAVDKGNIRTMPNRSMPANPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRDLL-SPLRDLNDSASLCKYLESFYTLRKPIASTINTLAGALYKVFSA-SPDQARKEMRQACFDYLSLGGTCSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSLKRMWIGARLISSASGIIFPIMKAEG 595

[Close]

BLAST of NO01G00760 vs. NCBI_GenBank
Match: XP_009361269.1 (PREDICTED: squalene monooxygenase [Pyrus x bretschneideri])

HSP 1 Score: 347.1 bits (889), Expect = 1.400e-91
Identity = 228/563 (40.50%), Postives = 300/563 (53.29%), Query Frame = 0

Query:  167 IIVVGAGTAGAAAAVGLAERGFKVLLFERDMTLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVGVEGYVVFRPHKLEVEGGEEEVVKNIMLNYPAYDPASMKELFGVIDPCVSPXXXXXXXXXXXXXIPPSTEEVHGAGKTLSPHSITKARKTAGAVATAATTVAQEHEPLRPKGRSFHNGRFVQRLRERALAEKNVTVIQGIVSRLVHEEDLTEGAKEGREKGKKQRVVGVEYKIETGRTLTNEEGVEVPEKETRRALAPLTIVADGLWSSLRTHVDKCAKPHQLSSFVGLIITHPFMSSPLPHAHCGHVVLAEPSPVLLYQISSTETRVLVDIHG-KLPSASTGELASHLYTHILPQLPPCLQAPFAEAVARGNFKSMPNRAMPAAKLAKDGVILLGDALNMRHPLTGGGMTVALRDVEALCYLLEEPTADLTNPVAFRALKKRFATERKSWAATINVLANALHAVFSTPDGDLTRKDLRDACFDYLSIGGYCAGGPINLLSGLTPRPSILAMHFFLVAFHGVGKYVWPFPTLGGMVRMYDMLHVACQIIMPLLTVEG 729
            +I+VGAG AGAA A  L + G +V + ERD+T  DRIVGELLQPGG   L  LGL++C  E ID+  V GY +F+      +G      KN  L+YP                                      E+ H                                      GRSFHNGRF+QR+RE+A    NV + QG V+ L+ E               K  ++GV+YK +TG  +T              A APLTIV DG +S+LR  +    K    S FVGL++     +  LPHA+ GHV+LA+PSP+L Y+ISSTE R LVD+ G K+PS S GE+A +L T + PQ+PP +   F  AV +G  ++MPNR+MPAA     G +L+GDA NMRHPLTGGGMTVAL D+  L  LL +P  +L +P       + F T RK  A+TIN LA AL+ VFS+   D  RK++R ACFDYLS+GG  + GP++LLSGL PRP  L +HFF VA +GVG+ + PFP+         ++  A  II P++  EG
Sbjct:   64 VIIVGAGVAGAALAHTLGKDGRQVHVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCV-EQIDAQRVFGYALFK------DG------KNTRLSYP-------------------------------------LEKFHS----------------------------------DVSGRSFHNGRFIQRMREKAATLPNVQLEQGTVTSLLEE---------------KGTIIGVQYKTKTGEEMT--------------AYAPLTIVCDGCFSNLRRSLCD-PKVDVPSCFVGLVLE----NCNLPHANHGHVILADPSPILFYKISSTEVRCLVDVPGQKVPSISNGEMAKYLKTVVAPQIPPQIYDSFVAAVDKGTIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLL-KPLGNLNDPSTLSKYLESFYTLRKPVASTINTLAGALYKVFSS-SPDQARKEMRQACFDYLSLGGVFSTGPVSLLSGLNPRPLSLVLHFFAVAVYGVGRLLLPFPSPKRAWIGARLISSASGIIFPIIKAEG 506

[Close]

BLAST of NO01G00760 vs. NCBI_GenBank
Match: XP_020873927.1 (squalene epoxidase 3 [Arabidopsis lyrata subsp. lyrata] >EFH45225.1 hypothetical protein ARALYDRAFT_490840 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 346.7 bits (888), Expect = 1.800e-91
Identity = 229/566 (40.46%), Postives = 300/566 (53.00%), Query Frame = 0

Query:  164 GQTIIVVGAGTAGAAAAVGLAERGFKVLLFERDMTLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVGVEGYVVFRPHKLEVEGGEEEVVKNIMLNYPAYDPASMKELFGVIDPCVSPXXXXXXXXXXXXXIPPSTEEVHGAGKTLSPHSITKARKTAGAVATAATTVAQEHEPLRPKGRSFHNGRFVQRLRERALAEKNVTVIQGIVSRLVHEEDLTEGAKEGREKGKKQRVVGVEYKIETGRTLTNEEGVEVPEKETRRALAPLTIVADGLWSSLRTHVDKCAKPHQLSSFVGLIITHPFMSSPLPHAHCGHVVLAEPSPVLLYQISSTETRVLVDIHG-KLPSASTGELASHLYTHILPQLPPCLQAPFAEAVARGNFKSMPNRAMPAAKLAKDGVILLGDALNMRHPLTGGGMTVALRDVEALCYLLEEPTADLTNPVAFRALKKRFATERKSWAATINVLANALHAVFSTPDGDLTRKDLRDACFDYLSIGGYCAGGPINLLSGLTPRPSILAMHFFLVAFHGVGKYVWPFPTLGGMVRMYDMLHVACQIIMPLLTVEG 729
            G  II+VGAG AGAA A  L + G +V + ERD+T  DRIVGELLQPGG   L  LGL++C KE ID+  V GY +F+      +G      K+  L+YP              D  V+                                                             GRSFHNGRFVQR+RE+A +  NV + QG V+ LV E  +               + GV+YK + G+ L              ++ APLTIV DG +S+LR  + K  K    S+FVGL++     +  LP  + GHVVL +PSP+L Y ISS+E R LVD+ G KLPS ++GE+A HL T + PQ+PP ++  F  AV +GN ++MPNR+MPA  +   G +LLGDA NMRHPLTGGGMTVAL D+  L  LL  P  DLTN  +     + F T RK  A+TIN LA AL+ VF     D  R ++R ACFDYLS+GG C+ GP+ LLSGL PRP  L +HFF VA  GVG+ + P P++  +     ++  A  II P++  EG
Sbjct:   54 GVDIIIVGAGVAGAALAHTLGKEGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVKE-IDAQRVLGYALFK------DG------KHTKLSYP----------LDQFDSDVA-------------------------------------------------------------GRSFHNGRFVQRMREKASSLPNVRMEQGTVTSLVEENGI---------------IKGVQYKTKDGQEL--------------KSFAPLTIVCDGCFSNLRRSLCK-PKVEVPSNFVGLVLE----NCELPFPNHGHVVLGDPSPILFYPISSSEVRCLVDVPGSKLPSVASGEMAHHLKTTVAPQVPPQIRDAFISAVEKGNIRTMPNRSMPADPIHTPGALLLGDAFNMRHPLTGGGMTVALSDIVILRDLL-NPLVDLTNKESLSKYIESFYTLRKPVASTINTLAGALYKVFLASPDD-ARSEMRRACFDYLSLGGVCSSGPVALLSGLNPRPMSLVLHFFAVAIFGVGRLLVPLPSVKRLWLGARLISSASGIIFPIIKAEG 499

[Close]

BLAST of NO01G00760 vs. NCBI_GenBank
Match: XP_008380096.1 (PREDICTED: squalene monooxygenase-like [Malus domestica])

HSP 1 Score: 346.7 bits (888), Expect = 1.800e-91
Identity = 230/563 (40.85%), Postives = 299/563 (53.11%), Query Frame = 0

Query:  167 IIVVGAGTAGAAAAVGLAERGFKVLLFERDMTLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVGVEGYVVFRPHKLEVEGGEEEVVKNIMLNYPAYDPASMKELFGVIDPCVSPXXXXXXXXXXXXXIPPSTEEVHGAGKTLSPHSITKARKTAGAVATAATTVAQEHEPLRPKGRSFHNGRFVQRLRERALAEKNVTVIQGIVSRLVHEEDLTEGAKEGREKGKKQRVVGVEYKIETGRTLTNEEGVEVPEKETRRALAPLTIVADGLWSSLRTHVDKCAKPHQLSSFVGLIITHPFMSSPLPHAHCGHVVLAEPSPVLLYQISSTETRVLVDIHG-KLPSASTGELASHLYTHILPQLPPCLQAPFAEAVARGNFKSMPNRAMPAAKLAKDGVILLGDALNMRHPLTGGGMTVALRDVEALCYLLEEPTADLTNPVAFRALKKRFATERKSWAATINVLANALHAVFSTPDGDLTRKDLRDACFDYLSIGGYCAGGPINLLSGLTPRPSILAMHFFLVAFHGVGKYVWPFPTLGGMVRMYDMLHVACQIIMPLLTVEG 729
            +I+VGAG AGAA A  L + G +V + ERD+T  DRIVGELLQPGG   L  LGL++C  E ID+  V GY +F+      +G      KN  L+YP                                      E+ H                                      GRSFHNGRF+QR+RE+A    NV + QG V+ L+ E               K  + GV+YK +TG  +T              A APLTIV DG +S+LR  +    K    S FVGLI+     +  LPHA+ GHV+LA+PSP+L YQISSTE R LVD+ G K+PS S GE+A +L T + PQ+PP +   F  AV +G+ ++MPNR+MPAA     G +L+GDA NMRHPLTGGGMTVAL D+  L  LL  P  +L +P       + F T RK  A+TIN LA AL+ VFS+   D  RK++R ACFDYLS+GG  + GP++LLSGL PRP  L +HFF VA +GVG+ + PFP+         ++  A  II P++  EG
Sbjct:   63 VIIVGAGVAGAALAHTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCV-EQIDAQRVFGYALFK------DG------KNTKLSYP-------------------------------------LEKFHS----------------------------------DVSGRSFHNGRFIQRMREKAATLPNVLLEQGTVTSLLEE---------------KGTIKGVQYKTKTGEEMT--------------AYAPLTIVCDGCFSNLRRSLCD-PKVDVPSCFVGLILE----NCNLPHANHGHVILADPSPILFYQISSTEVRCLVDVPGQKVPSISNGEMAKYLKTVVAPQIPPQIYDSFIAAVDKGSIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLL-RPLGNLNDPSTLSKYLESFYTLRKPVASTINTLAGALYKVFSS-SPDQARKEMRQACFDYLSLGGVFSMGPVSLLSGLNPRPLSLVLHFFAVAVYGVGRLLLPFPSPKRAWIGARLISSASGIIFPIIKAEG 505

The following BLAST results are available for this feature:

BLAST of NO01G00760 vs. NCBI_GenBank

BLAST of NO01G00760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
CBI33260.3	2.200e-92	40.38	unnamed protein product, partial [Vitis vinifera]	[more]
XP_003080880.2	2.200e-92	39.49	Aromatic-ring hydroxylase-like [Ostreococcus tauri...	[more]
XP_003635346.2	2.200e-92	40.38	PREDICTED: squalene epoxidase 3 [Vitis vinifera]	[more]
OUS47061.1	2.200e-92	39.49	squalene epoxidase-domain-containing protein [Ostr...	[more]
AFI33133.2	3.700e-92	40.67	squalene epoxidase 1 [Eriobotrya japonica]	[more]
OMP01755.1	4.900e-92	39.73	Aromatic-ring hydroxylase-like protein [Corchorus ...	[more]
PON32390.1	1.100e-91	40.14	FAD dependent oxidoreductase [Parasponia andersoni...	[more]
XP_009361269.1	1.400e-91	40.50	PREDICTED: squalene monooxygenase [Pyrus x bretsch...	[more]
XP_020873927.1	1.800e-91	40.46	squalene epoxidase 3 [Arabidopsis lyrata subsp. ly...	[more]
XP_008380096.1	1.800e-91	40.85	PREDICTED: squalene monooxygenase-like [Malus dome...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL006	nonsL006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR047	ncniR047	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR091	ngnoR091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK008306	NSK008306	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO01G00760.1	NO01G00760.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|627591	gene_52	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100575g3	gene1607	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO01G00760.1	NO01G00760.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO01G00760 ID=NO01G00760|Name=NO01G00760|organism=Nannochloropsis oceanica|type=gene|length=2406bp
ATGGAGGCAAGCACGCCTACACAGGGCCAAGTGCCACACCGTCCATCATT
ATCATCAGAACCAACACCACCAGGATCTCCTAATAGTAGCGTGGGTGTCG
GCGGCTCCATCGTCGTCGCCTCCTCTTTGTTGTTGGTCTCCAGCCTCACC
CTCTGGCAGGCCTGGCACCAGCACCAGCAGACACCTTTGGCCACGACCGG
CAATGCCGTAAACACAGCCAAGgttcgtacatacatgtccttccctctgc
tgtttatcgtcaaaactgcaatctgggtccattcacgggtcatgcttctc
tgcctgccccccccccttctaattccctctctccctttctccatgcatcc
atccatccctccatccatcaccccgcagCTCCTCCTTCCTGTCCTCGGTG
TGCTTGCATCGCTTTCTTTCCTCTGTTATACCTCTCTCTTCTCCTCTGCC
CAGTCTCAAAGCAGCTGTGACGAACCCGACACCAAAATTACTCTTGGGCA
GAAAAGCACCGACTCCTCCTTCTCCCCCTCCACCACCACCACCTCTTCTC
AACTTCCCTCCTCCTCTATCTCCAACGCCGAGATGCTCTTCCGCTCCGGT
GGGGTGGGGGGCAATCGCATTCCTCCCCGCCAAGCCCCTTCAGCCGGACA
GACTATCATTGTGGTTGGAGCAGGTACCGCAGGAGCAGCCGCGGCCGTCG
GGCTCGCCGAACGAGGGTTCAAGGTGTTGTTGTTCGAGAGAGACATGACG
CTGCAAGACCGGATCGTAGGAGAATTGTTGCAGCCAGGGGGGGTGCGGGC
GCTGGAAAGACTGGGATTGGATGAATGCGCGAAGGAAGGCATTGACTCGG
TGGGGGTGGAGGGGTATGTGGTTTTTCGTCCTCACAAGCTGGAAGTGGAA
GGAGGGGAAGAGGAAGTTGTGAAGAACATTATGTTGAATTACCCGGCATA
CGACCCTGCGTCAATGAAGGAGCTGTTTGGCGTGATCGATCCCTGCGTCA
GCCCCTCGTCCTCGTCCTCGTCCTCATCTTCGTCCTTGTTCTCCATCCCT
CCTTCCACGGAAGAGGTCCATGGGGCCGGCAAGACGCTCTCCCCCCACTC
AATAACTAAAGCCCGAAAAACCGCAGGAGCAGTAGCCACAGCAGCAACAA
CAGTCGCACAAGAGCATGAGCCGTTACGGCCCAAAGGCCGCAGTTTTCAC
AACGGTCGATTCGTCCAACGGTTGCGCGAGCGGGCGCTGGCGGAGAAAAA
TGTCACCGTCATCCAGGGAATTGTCAGTCGGCTCGTCCACGAAGAGGACT
TGACGGAGGGAGCGAAGGAGGGAAGGGAGAAGGGAAAGAAGCAACGCGTC
GTGGGAGTGGAATACAAGATCGAAACGGGTCGAACCCTCACCAACGAAGA
GGGGGTGGAAGTACCTGAAAAAGAGACCCGGAGGGCCCTGGCCCCCCTCA
CCATCGTCGCCGACGGCCTCTGGTCCTCTCTCCGGACCCACGTCGATAAA
TGCGCGAAGCCTCACCAGCTTTCCTCCTTTGTTGGCCTGATAATCACCCA
CCCATTCATGTCCTCCCCCCTCCCCCACGCCCATTGCGGCCACGTCGTCC
TAGCCGAGCCTTCCCCAGTCCTGCTCTACCAAATCTCCTCCACTGAGACC
CGAGTCCTCGTCGACATCCACGGCAAGCTGCCCTCCGCCTCGACTGGAGA
GCTGGCCTCCCACCTCTACACCCACATCCTCCCCCAACTCCCTCCCTGTC
TCCAAGCTCCTTTCGCCGAGGCCGTCGCCCGCGGGAACTTCAAGTCCATG
CCGAACCGTGCCATGCCTGCTGCGAAGCTGGCCAAGGATGGCGTCATTCT
CCTCGGGGATGCGCTGAACATGCGACACCCGCTCACAGGGGGTGGGATGA
CGGTGGCCCTCCGTGACGTCGAGGCATTGTGTTATTTGTTGGAAGAACCA
ACCGCGGACCTTACCAACCCCGTCGCTTTCCGCGCGCTCAAAAAGCGCTT
TGCCACGGAACGAAAATCGTGGGCTGCCACGATCAATGTGCTGGCCAATG
CCCTGCACGCGGTCTTCTCCACCCCAGATGGAGACCTGACCCGGAAGGAT
CTAAGAGACGCGTGTTTTGATTACCTTTCCATTGGCGGCTATTGCGCCGG
CGGTCCTATTAACTTGCTCTCGGGCCTAACGCCTCGTCCGTCCATCTTGG
CGATGCATTTCTTCCTGGTGGCGTTTCACGGGGTGGGGAAGTACGTCTGG
CCGTTTCCTACCCTCGGGGGTATGGTCCGCATGTACGACATGCTGCATGT
CGCGTGTCAGATTATCATGCCTTTGCTGACGGTGGAGGGATCGACGGTGC
TGGCCTCGTGGCCAGTGCGGACGGCGATTGGGGTGGTGTTCCCCTATGGG
AAGTGA

protein sequence of NO01G00760.1

>NO01G00760.1-protein ID=NO01G00760.1-protein|Name=NO01G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=750bp
MEASTPTQGQVPHRPSLSSEPTPPGSPNSSVGVGGSIVVASSLLLVSSLT
LWQAWHQHQQTPLATTGNAVNTAKLLLPVLGVLASLSFLCYTSLFSSAQS
QSSCDEPDTKITLGQKSTDSSFSPSTTTTSSQLPSSSISNAEMLFRSGGV
GGNRIPPRQAPSAGQTIIVVGAGTAGAAAAVGLAERGFKVLLFERDMTLQ
DRIVGELLQPGGVRALERLGLDECAKEGIDSVGVEGYVVFRPHKLEVEGG
EEEVVKNIMLNYPAYDPASMKELFGVIDPCVSPSSSSSSSSSSLFSIPPS
TEEVHGAGKTLSPHSITKARKTAGAVATAATTVAQEHEPLRPKGRSFHNG
RFVQRLRERALAEKNVTVIQGIVSRLVHEEDLTEGAKEGREKGKKQRVVG
VEYKIETGRTLTNEEGVEVPEKETRRALAPLTIVADGLWSSLRTHVDKCA
KPHQLSSFVGLIITHPFMSSPLPHAHCGHVVLAEPSPVLLYQISSTETRV
LVDIHGKLPSASTGELASHLYTHILPQLPPCLQAPFAEAVARGNFKSMPN
RAMPAAKLAKDGVILLGDALNMRHPLTGGGMTVALRDVEALCYLLEEPTA
DLTNPVAFRALKKRFATERKSWAATINVLANALHAVFSTPDGDLTRKDLR
DACFDYLSIGGYCAGGPINLLSGLTPRPSILAMHFFLVAFHGVGKYVWPF
PTLGGMVRMYDMLHVACQIIMPLLTVEGSTVLASWPVRTAIGVVFPYGK*

Synonyms

Publications