NO01G00750, NO01G00750 (gene) Nannochloropsis oceanica

Overview
NameNO01G00750
Unique NameNO01G00750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1732
Alignment locationchr1:190633..192364 +

Link to JBrowse

Properties
Property NameValue
DescriptionProteasome subunit alpha type
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:190633..192364 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0019773proteasome core complex, alpha-subunit complex
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
GO:0019538protein metabolic process
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR023332Proteasome_suA-type
IPR034647Proteasome_subunit_alpha4
IPR001353Proteasome_sua/b
IPR000426Proteasome_asu_N
Homology
[Close]
BLAST of NO01G00750 vs. NCBI_GenBank
Match: CBN74912.1 (proteasome subunit [Ectocarpus siliculosus])

HSP 1 Score: 347.4 bits (890), Expect = 3.700e-92
Identity = 174/254 (68.50%), Postives = 210/254 (82.68%), Query Frame = 0 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGIL  DGI++AAERK  SKLLAPSK+S+K Y++  + +CVVAGLT+DAN+L+N AR+SAQRYLYQY E MP+EQLV+ +C+YKQAYTQ+GGLRPFGVSFLF G+D HHGFQLY SDP+G +GGW ATAIGAN QAGK LLK ++ E  + ++ E LKLA KVL KTMD+TTPS EK+EF T+    +V G++VH  L  EE+  +L EV+A TA +GD+
Sbjct:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQAGKALLKTDYVE--ESSVDECLKLAVKVLNKTMDSTTPSPEKMEFTTI---TRVNGKIVHKILTDEESDKILKEVAAETATQGDV 249
[Close]
BLAST of NO01G00750 vs. NCBI_GenBank
Match: XP_008862013.1 (hypothetical protein H310_00856 [Aphanomyces invadans] >ETW08208.1 hypothetical protein H310_00856 [Aphanomyces invadans])

HSP 1 Score: 330.5 bits (846), Expect = 4.600e-87
Identity = 169/254 (66.54%), Postives = 201/254 (79.13%), Query Frame = 0 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT SKLLAP K+S+K  ++D HI C VAGLTSDANIL+N ARLSAQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRH GFQLY SDP+G +GGW ATAIGAN +A KNLLK+++ EG   T+ E LK + KV+ KTMDTTTP+AEK+EF TL   E+  G++VH  L   ET ALL +V A TA  GD+
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLAPVKNSEKTMKLDDHIICAVAGLTSDANILVNYARLSAQRYQLSYQEHQPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANNRAAKNLLKSDYQEG--MTVEEALKFSVKVMAKTMDTTTPTAEKLEFSTLTRNEQ--GKLVHRLLTAAETDALLKDVGAQTADSGDI 250
[Close]
BLAST of NO01G00750 vs. NCBI_GenBank
Match: XP_009829541.1 (hypothetical protein H257_06126 [Aphanomyces astaci] >ETV80594.1 hypothetical protein H257_06126 [Aphanomyces astaci])

HSP 1 Score: 325.5 bits (833), Expect = 1.500e-85
Identity = 167/254 (65.75%), Postives = 200/254 (78.74%), Query Frame = 0 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT SKLLAP K+S+K  ++D HI C VAGLTSDANIL+N ARL+AQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRH GFQLY SDP+G +GGW ATAIGAN +A KNLLK+++ E    ++ E LK + KV+ KTMDTTTP+AEK+EF TL   E+  G++VH  L   ET ALL EV A TA  GD+
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLAPVKTSEKTMKLDDHIICAVAGLTSDANILVNYARLTAQRYQLSYQEHQPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANNRAAKNLLKSDYQE--DLSVEEALKFSVKVMAKTMDTTTPTAEKLEFSTLTRNEQ--GKLVHRLLTAAETEALLKEVGAQTADSGDI 250
[Close]
BLAST of NO01G00750 vs. NCBI_GenBank
Match: OEU18565.1 (N-terminal nucleophile aminohydrolase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 320.9 bits (821), Expect = 3.700e-84
Identity = 166/257 (64.59%), Postives = 199/257 (77.43%), Query Frame = 0 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDK--PTLAEGLKLAAKVLLKTMDTTT--PSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGD 254
            MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGIL +DGIV+A+ER+ TS LLAP+K+S+K YQ+ GH +C VAGLT+DANILI+QARL A RY YQYQE +P+EQLV  +C+YKQ YTQ GGLRPFGV+FLFAGYD  +GFQLY+SDP+G + GW AT IGAN QAGK+LLK E+  G++  P + E L LA KVL KTMD TT   +AEK+E +T+   E   G  VH  L  EE + +++ V A  A  GD
Sbjct:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILASDGIVMASERRITSGLLAPAKTSEKTYQLCGHASCNVAGLTADANILIDQARLRAGRYAYQYQEPIPIEQLVEYVCNYKQFYTQRGGLRPFGVAFLFAGYDEQYGFQLYQSDPSGNYSGWKATVIGANNQAGKSLLKTEYKTGEEKIPNIQEALMLAVKVLNKTMDGTTAAAAAEKMELYTMTRNET--GECVHHILNQEEASKVIDAVEAEAASAGD 255
[Close]
BLAST of NO01G00750 vs. NCBI_GenBank
Match: OQS01033.1 (proteasome subunit alpha [Achlya hypogyna])

HSP 1 Score: 320.5 bits (820), Expect = 4.800e-84
Identity = 164/254 (64.57%), Postives = 194/254 (76.38%), Query Frame = 0 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT S LLAP KSS+K  ++D HI C VAGLTSDANIL+N AR+SAQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRH GFQLY SDP+G +GGW ATAIGAN +A K++LKN++ E    T+ E LK + KV+ KTMDTTTP+AEK+EF TL       G++VH  L   ET  LL E     A EGDM
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSALLAPVKSSEKTMKLDDHIICAVAGLTSDANILVNYARVSAQRYELSYQEKQPCEQLVQAICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANNRAAKSMLKNDYKE--DMTVEEALKFSVKVMGKTMDTTTPTAEKLEFSTL--TRTANGKLVHRLLSAAETEQLLKEADLQAADEGDM 250
[Close]
BLAST of NO01G00750 vs. NCBI_GenBank
Match: XP_009529905.1 (hypothetical protein PHYSODRAFT_286443 [Phytophthora sojae] >EGZ16156.1 hypothetical protein PHYSODRAFT_286443 [Phytophthora sojae])

HSP 1 Score: 320.1 bits (819), Expect = 6.300e-84
Identity = 161/254 (63.39%), Postives = 199/254 (78.35%), Query Frame = 0 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT SKLL PSK+S+K  ++D H+ C VAGLTSDANIL+N ARL+AQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRHHGFQLY SDP+G +GGW ATAIGAN +A K++LK+++ EG   T+ E L  + KV+ KTMD+T+PSAEK+EF T+       G++VH  L  +ET  LL + +A TA  GDM
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLTPSKTSEKTIKLDDHLICAVAGLTSDANILVNYARLAAQRYELAYQEKEPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHHGFQLYHSDPSGNYGGWKATAIGANNRAAKSMLKSDYEEG--MTVEEALAFSVKVMNKTMDSTSPSAEKLEFTTV--TRNAEGKIVHRQLTQKETEELLQKAAADTASSGDM 250
[Close]
BLAST of NO01G00750 vs. NCBI_GenBank
Match: OWZ24507.1 (Proteasome subunit alpha [Phytophthora megakarya])

HSP 1 Score: 320.1 bits (819), Expect = 6.300e-84
Identity = 161/254 (63.39%), Postives = 199/254 (78.35%), Query Frame = 0 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT SKLL PSK+S+K  ++D H+ C VAGLTSDANIL+N ARLSAQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRHHGFQLY SDP+G +GGW ATAIGAN +A K++LK+++ EG   T+ E L  + KV+ KTMD+T+PSAEK+EF T+       G+++H  L  +ET  LL + +A TA  GDM
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLMPSKTSEKTIKLDDHLICAVAGLTSDANILVNYARLSAQRYELAYQEKEPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHHGFQLYHSDPSGNYGGWKATAIGANNRAAKSMLKSDYEEG--MTVEEALAFSVKVMNKTMDSTSPSAEKLEFTTV--TRNADGKIMHRQLTEKETEELLQKAAADTASSGDM 250
[Close]
BLAST of NO01G00750 vs. NCBI_GenBank
Match: XP_002908797.1 (proteasome subunit alpha, putative [Phytophthora infestans T30-4] >AAN31468.1 proteasome subunit [Phytophthora infestans] >EEY57611.1 proteasome subunit alpha, putative [Phytophthora infestans T30-4])

HSP 1 Score: 319.3 bits (817), Expect = 1.100e-83
Identity = 160/254 (62.99%), Postives = 198/254 (77.95%), Query Frame = 0 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT SKLL PSK+S+K  ++D H+ C VAGLT+DANIL+N ARLSAQRY   YQE  P EQLV+++C+YKQAYTQ+GG RPFGVSFL+AG+DRHHGFQLY SDP+G +GGW ATAIGAN +A K++LK+++ EG   T+ E L  + KV+ KTMD+T+PSAEK+EF T+       G++VH  L   ET  LL + +A TA  GDM
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLTPSKTSEKTIKLDDHLICAVAGLTADANILVNYARLSAQRYELAYQEKEPCEQLVQTLCNYKQAYTQFGGQRPFGVSFLYAGWDRHHGFQLYHSDPSGNYGGWKATAIGANNRAAKSMLKSDYEEG--MTVEEALAFSVKVMNKTMDSTSPSAEKLEFTTV--TRNADGKIVHRQLTESETDELLKKAAADTASSGDM 250
[Close]
BLAST of NO01G00750 vs. NCBI_GenBank
Match: XP_008608267.1 (proteasome subunit alpha type-4 [Saprolegnia diclina VS20] >XP_012201541.1 proteasome subunit alpha type-4 [Saprolegnia parasitica CBS 223.65] >EQC38675.1 proteasome subunit alpha type-4 [Saprolegnia diclina VS20] >KDO27766.1 proteasome subunit alpha type-4 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 319.3 bits (817), Expect = 1.100e-83
Identity = 163/254 (64.17%), Postives = 193/254 (75.98%), Query Frame = 0 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT S LLAP KSS+K  ++D HI C VAGLTSDANIL+N AR+SAQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRH GFQLY SDP+G +GGW ATAIGAN +A K++LKN++ E    T+ E LK + KV+ KTMDTTTP+AEK+EF TL       G++VH  L   ET  LL E     A  GDM
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSALLAPVKSSEKTMKLDDHIICAVAGLTSDANILVNYARVSAQRYELSYQEKQPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANNRAAKSMLKNDYKE--DMTIEEALKFSVKVMGKTMDTTTPTAEKLEFSTL--TRSANGKLVHRLLSAAETEQLLKEADLQAAESGDM 250
[Close]
BLAST of NO01G00750 vs. NCBI_GenBank
Match: OQS07108.1 (proteasome subunit alpha [Thraustotheca clavata])

HSP 1 Score: 318.9 bits (816), Expect = 1.400e-83
Identity = 163/254 (64.17%), Postives = 193/254 (75.98%), Query Frame = 0 
Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT S LLAP KSS+K  +ID HI C VAGLTSDANIL+N AR+SAQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRH GFQLY SDP+G +GGW ATAIGAN +A K++LKN++ E    T+ E LK + KV+ KTMDTTTP+AEK+EF TL       G+++H  L   ET  LL E     A  GDM
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSALLAPVKSSEKTMKIDDHIICAVAGLTSDANILVNYARVSAQRYELSYQEKQPCEQLVQAICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANNRAAKSMLKNDYKE--DMTVDEALKFSVKVMGKTMDTTTPTAEKLEFSTL--TRSANGKLIHRLLSAAETELLLKEADLQAAESGDM 250
The following BLAST results are available for this feature:
BLAST of NO01G00750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN74912.13.700e-9268.50proteasome subunit [Ectocarpus siliculosus][more]
XP_008862013.14.600e-8766.54hypothetical protein H310_00856 [Aphanomyces invad... [more]
XP_009829541.11.500e-8565.75hypothetical protein H257_06126 [Aphanomyces astac... [more]
OEU18565.13.700e-8464.59N-terminal nucleophile aminohydrolase [Fragilariop... [more]
OQS01033.14.800e-8464.57proteasome subunit alpha [Achlya hypogyna][more]
XP_009529905.16.300e-8463.39hypothetical protein PHYSODRAFT_286443 [Phytophtho... [more]
OWZ24507.16.300e-8463.39Proteasome subunit alpha [Phytophthora megakarya][more]
XP_002908797.11.100e-8362.99proteasome subunit alpha, putative [Phytophthora i... [more]
XP_008608267.11.100e-8364.17proteasome subunit alpha type-4 [Saprolegnia dicli... [more]
OQS07108.11.400e-8364.17proteasome subunit alpha [Thraustotheca clavata][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008307NSK008307Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00750.1NO01G00750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576029gene_50Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100851g1gene1608Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00750.1NO01G00750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00750 ID=NO01G00750|Name=NO01G00750|organism=Nannochloropsis oceanica|type=gene|length=1732bp
ATGGCAAGACGCTACGATTCGTCGACCACCACGTTCTCGCCGGAAGgtgc
gttttttgcgtccttcaatctatctgcctgtatgattgttgcctgtgtct
tccccctcccaagcatcatcatgccccgttccacgtcccaaccccttccc
ccgcacctgtgtcttgagtccacggtaacagtgcagactacaccgcccct
cgcccctcgtctcatgttaccttttgcccgtctatctctgacctcctttt
cccctaccccgaaagGCCGTCTGCATCAGGTTGAGTACGCCATTGAGGCT
ATCAACAACGCCGGAACCTGCGTGGGCATCCTCTGCGCCGACGGTATAGT
CCTGGCAGCGGAACGAAAGACCACCAGCAAGCTTCTAGCACCATCTAAGT
CCAGCGACAAGATTTACCAGATCGACGGGCACATCGCCTGTGTGGTGGCG
GGCCTGACGTCTGATGCTAACATTCTGATAAACCAAGgtgcggaaagcca
agaggaaaagagaggaaacattcgggcgcgggtgaatccttaatgctctc
taaatttatgcgtgctcgtgttcgtgaatttctgtggaattctttcctcg
ctctctggcccacgcgcattgcccggaaggtgtcgagacaagctgtagaa
gaaccacacccctcatgatcttccacccccccccctccctccccctctct
ccagCCCGTCTGTCCGCCCAACGCTACCTGTACCAGTACCAAGAGACCAT
GCCCGTCGAGCAGCTCGTGCGGTCCATCTGCGACTACAAGCAGGCGTATA
CACAGTACGGAGGGCTGCGCCCTTTCGGGGTCTCCTTCCTGTTTGCCGGC
TACGACAGgtaggaaggacaccgcccccatccctccctccatccctccct
ccctccatccctccctccctccctctttccctccctccctcccatctacc
ctattttgggggggcaatgcacacacgtattcagcccttccttccttccc
cccttccctatcctccttccccagGCACCATGGTTTCCAGCTATACGAGT
CTGATCCTGCCGGGACCTTCGGGGGATGGACCGCCACAGCCATTGGCGCC
AATTTTCAGgtatgtcttccttccctctccctccttccctccctccctca
tccctccccaccccctttcgaaatggacgcctcgcttttagttcctcgtg
tgggagtgtttttccccacagtgcttcaaacggcctcttccctgcctccc
tctttcaagcccgcgctggaggatggacatcaaagataatgaacaagacg
ctcctaccaccgactccccctccctctcttcctccctccctccctcccta
gGCCGGGAAAAATCTGTTGAAGAACGAATTTCCGGAGGGGGACAAGCCTA
CGCTGGCGGAAGGTTTGAAGCTGGCGGCCAAGGTGTTGCTTAAGACGATG
GATACCACCACGCCGTCCGCGGAGAAGgtaagggagggagggaaggaggg
atgtagggataaattgactcgacggggaacgatagcaagtcaacccggcc
atgcatcgggcactcaaccatatcatatctccctccccttttccctctag
GTGGAGTTTTTCACGCTCAAGGCCGCGGAGAAGGTGGGGGGGAGGGTGGT
TCACGCCACGCTGGGGACGGAGGAGACGACAGCCTTATTGAACGAGGTCA
GCGCAGCCACTGCCCCTGAGGGGGACATGTAA
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protein sequence of NO01G00750.1

>NO01G00750.1-protein ID=NO01G00750.1-protein|Name=NO01G00750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=255bp
MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERK
TTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQ
YQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYES
DPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLK
TMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAP
EGDM*
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Synonyms
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