NO01G00750, NO01G00750 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G00750
Unique Name	NO01G00750
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1732
Alignment location	chr1:190633..192364 +

Link to JBrowse

Properties


Property Name	Value
Description	Proteasome subunit alpha type

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:190633..192364 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005839	proteasome core complex
GO:0019773	proteasome core complex, alpha-subunit complex
GO:0005737	cytoplasm
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0004298	threonine-type endopeptidase activity
GO:0004175	endopeptidase activity
GO:0016787	hydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0051603	proteolysis involved in cellular protein catabolic process
GO:0006511	ubiquitin-dependent protein catabolic process
GO:0019538	protein metabolic process
GO:0009987	cellular process
GO:0009056	catabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR029055	Ntn_hydrolases_N
IPR023332	Proteasome_suA-type
IPR034647	Proteasome_subunit_alpha4
IPR001353	Proteasome_sua/b
IPR000426	Proteasome_asu_N

Homology

[Close]

BLAST of NO01G00750 vs. NCBI_GenBank
Match: CBN74912.1 (proteasome subunit [Ectocarpus siliculosus])

HSP 1 Score: 347.4 bits (890), Expect = 3.700e-92
Identity = 174/254 (68.50%), Postives = 210/254 (82.68%), Query Frame = 0

Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGIL  DGI++AAERK  SKLLAPSK+S+K Y++  + +CVVAGLT+DAN+L+N AR+SAQRYLYQY E MP+EQLV+ +C+YKQAYTQ+GGLRPFGVSFLF G+D HHGFQLY SDP+G +GGW ATAIGAN QAGK LLK ++ E  + ++ E LKLA KVL KTMD+TTPS EK+EF T+    +V G++VH  L  EE+  +L EV+A TA +GD+
Sbjct:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQAGKALLKTDYVE--ESSVDECLKLAVKVLNKTMDSTTPSPEKMEFTTI---TRVNGKIVHKILTDEESDKILKEVAAETATQGDV 249

[Close]

BLAST of NO01G00750 vs. NCBI_GenBank
Match: XP_008862013.1 (hypothetical protein H310_00856 [Aphanomyces invadans] >ETW08208.1 hypothetical protein H310_00856 [Aphanomyces invadans])

HSP 1 Score: 330.5 bits (846), Expect = 4.600e-87
Identity = 169/254 (66.54%), Postives = 201/254 (79.13%), Query Frame = 0

Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT SKLLAP K+S+K  ++D HI C VAGLTSDANIL+N ARLSAQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRH GFQLY SDP+G +GGW ATAIGAN +A KNLLK+++ EG   T+ E LK + KV+ KTMDTTTP+AEK+EF TL   E+  G++VH  L   ET ALL +V A TA  GD+
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLAPVKNSEKTMKLDDHIICAVAGLTSDANILVNYARLSAQRYQLSYQEHQPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANNRAAKNLLKSDYQEG--MTVEEALKFSVKVMAKTMDTTTPTAEKLEFSTLTRNEQ--GKLVHRLLTAAETDALLKDVGAQTADSGDI 250

[Close]

BLAST of NO01G00750 vs. NCBI_GenBank
Match: XP_009829541.1 (hypothetical protein H257_06126 [Aphanomyces astaci] >ETV80594.1 hypothetical protein H257_06126 [Aphanomyces astaci])

HSP 1 Score: 325.5 bits (833), Expect = 1.500e-85
Identity = 167/254 (65.75%), Postives = 200/254 (78.74%), Query Frame = 0

Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT SKLLAP K+S+K  ++D HI C VAGLTSDANIL+N ARL+AQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRH GFQLY SDP+G +GGW ATAIGAN +A KNLLK+++ E    ++ E LK + KV+ KTMDTTTP+AEK+EF TL   E+  G++VH  L   ET ALL EV A TA  GD+
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLAPVKTSEKTMKLDDHIICAVAGLTSDANILVNYARLTAQRYQLSYQEHQPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANNRAAKNLLKSDYQE--DLSVEEALKFSVKVMAKTMDTTTPTAEKLEFSTLTRNEQ--GKLVHRLLTAAETEALLKEVGAQTADSGDI 250

[Close]

BLAST of NO01G00750 vs. NCBI_GenBank
Match: OEU18565.1 (N-terminal nucleophile aminohydrolase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 320.9 bits (821), Expect = 3.700e-84
Identity = 166/257 (64.59%), Postives = 199/257 (77.43%), Query Frame = 0

Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDK--PTLAEGLKLAAKVLLKTMDTTT--PSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGD 254
            MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGIL +DGIV+A+ER+ TS LLAP+K+S+K YQ+ GH +C VAGLT+DANILI+QARL A RY YQYQE +P+EQLV  +C+YKQ YTQ GGLRPFGV+FLFAGYD  +GFQLY+SDP+G + GW AT IGAN QAGK+LLK E+  G++  P + E L LA KVL KTMD TT   +AEK+E +T+   E   G  VH  L  EE + +++ V A  A  GD
Sbjct:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILASDGIVMASERRITSGLLAPAKTSEKTYQLCGHASCNVAGLTADANILIDQARLRAGRYAYQYQEPIPIEQLVEYVCNYKQFYTQRGGLRPFGVAFLFAGYDEQYGFQLYQSDPSGNYSGWKATVIGANNQAGKSLLKTEYKTGEEKIPNIQEALMLAVKVLNKTMDGTTAAAAAEKMELYTMTRNET--GECVHHILNQEEASKVIDAVEAEAASAGD 255

[Close]

BLAST of NO01G00750 vs. NCBI_GenBank
Match: OQS01033.1 (proteasome subunit alpha [Achlya hypogyna])

HSP 1 Score: 320.5 bits (820), Expect = 4.800e-84
Identity = 164/254 (64.57%), Postives = 194/254 (76.38%), Query Frame = 0

Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT S LLAP KSS+K  ++D HI C VAGLTSDANIL+N AR+SAQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRH GFQLY SDP+G +GGW ATAIGAN +A K++LKN++ E    T+ E LK + KV+ KTMDTTTP+AEK+EF TL       G++VH  L   ET  LL E     A EGDM
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSALLAPVKSSEKTMKLDDHIICAVAGLTSDANILVNYARVSAQRYELSYQEKQPCEQLVQAICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANNRAAKSMLKNDYKE--DMTVEEALKFSVKVMGKTMDTTTPTAEKLEFSTL--TRTANGKLVHRLLSAAETEQLLKEADLQAADEGDM 250

[Close]

BLAST of NO01G00750 vs. NCBI_GenBank
Match: XP_009529905.1 (hypothetical protein PHYSODRAFT_286443 [Phytophthora sojae] >EGZ16156.1 hypothetical protein PHYSODRAFT_286443 [Phytophthora sojae])

HSP 1 Score: 320.1 bits (819), Expect = 6.300e-84
Identity = 161/254 (63.39%), Postives = 199/254 (78.35%), Query Frame = 0

Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT SKLL PSK+S+K  ++D H+ C VAGLTSDANIL+N ARL+AQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRHHGFQLY SDP+G +GGW ATAIGAN +A K++LK+++ EG   T+ E L  + KV+ KTMD+T+PSAEK+EF T+       G++VH  L  +ET  LL + +A TA  GDM
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLTPSKTSEKTIKLDDHLICAVAGLTSDANILVNYARLAAQRYELAYQEKEPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHHGFQLYHSDPSGNYGGWKATAIGANNRAAKSMLKSDYEEG--MTVEEALAFSVKVMNKTMDSTSPSAEKLEFTTV--TRNAEGKIVHRQLTQKETEELLQKAAADTASSGDM 250

[Close]

BLAST of NO01G00750 vs. NCBI_GenBank
Match: OWZ24507.1 (Proteasome subunit alpha [Phytophthora megakarya])

HSP 1 Score: 320.1 bits (819), Expect = 6.300e-84
Identity = 161/254 (63.39%), Postives = 199/254 (78.35%), Query Frame = 0

Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT SKLL PSK+S+K  ++D H+ C VAGLTSDANIL+N ARLSAQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRHHGFQLY SDP+G +GGW ATAIGAN +A K++LK+++ EG   T+ E L  + KV+ KTMD+T+PSAEK+EF T+       G+++H  L  +ET  LL + +A TA  GDM
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLMPSKTSEKTIKLDDHLICAVAGLTSDANILVNYARLSAQRYELAYQEKEPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHHGFQLYHSDPSGNYGGWKATAIGANNRAAKSMLKSDYEEG--MTVEEALAFSVKVMNKTMDSTSPSAEKLEFTTV--TRNADGKIMHRQLTEKETEELLQKAAADTASSGDM 250

[Close]

BLAST of NO01G00750 vs. NCBI_GenBank
Match: XP_002908797.1 (proteasome subunit alpha, putative [Phytophthora infestans T30-4] >AAN31468.1 proteasome subunit [Phytophthora infestans] >EEY57611.1 proteasome subunit alpha, putative [Phytophthora infestans T30-4])

HSP 1 Score: 319.3 bits (817), Expect = 1.100e-83
Identity = 160/254 (62.99%), Postives = 198/254 (77.95%), Query Frame = 0

Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT SKLL PSK+S+K  ++D H+ C VAGLT+DANIL+N ARLSAQRY   YQE  P EQLV+++C+YKQAYTQ+GG RPFGVSFL+AG+DRHHGFQLY SDP+G +GGW ATAIGAN +A K++LK+++ EG   T+ E L  + KV+ KTMD+T+PSAEK+EF T+       G++VH  L   ET  LL + +A TA  GDM
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLTPSKTSEKTIKLDDHLICAVAGLTADANILVNYARLSAQRYELAYQEKEPCEQLVQTLCNYKQAYTQFGGQRPFGVSFLYAGWDRHHGFQLYHSDPSGNYGGWKATAIGANNRAAKSMLKSDYEEG--MTVEEALAFSVKVMNKTMDSTSPSAEKLEFTTV--TRNADGKIVHRQLTESETDELLKKAAADTASSGDM 250

[Close]

BLAST of NO01G00750 vs. NCBI_GenBank
Match: XP_008608267.1 (proteasome subunit alpha type-4 [Saprolegnia diclina VS20] >XP_012201541.1 proteasome subunit alpha type-4 [Saprolegnia parasitica CBS 223.65] >EQC38675.1 proteasome subunit alpha type-4 [Saprolegnia diclina VS20] >KDO27766.1 proteasome subunit alpha type-4 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 319.3 bits (817), Expect = 1.100e-83
Identity = 163/254 (64.17%), Postives = 193/254 (75.98%), Query Frame = 0

Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT S LLAP KSS+K  ++D HI C VAGLTSDANIL+N AR+SAQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRH GFQLY SDP+G +GGW ATAIGAN +A K++LKN++ E    T+ E LK + KV+ KTMDTTTP+AEK+EF TL       G++VH  L   ET  LL E     A  GDM
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSALLAPVKSSEKTMKLDDHIICAVAGLTSDANILVNYARVSAQRYELSYQEKQPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANNRAAKSMLKNDYKE--DMTIEEALKFSVKVMGKTMDTTTPTAEKLEFSTL--TRSANGKLVHRLLSAAETEQLLKEADLQAAESGDM 250

[Close]

BLAST of NO01G00750 vs. NCBI_GenBank
Match: OQS07108.1 (proteasome subunit alpha [Thraustotheca clavata])

HSP 1 Score: 318.9 bits (816), Expect = 1.400e-83
Identity = 163/254 (64.17%), Postives = 193/254 (75.98%), Query Frame = 0

Query:    1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERKTTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQYQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYESDPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLKTMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAPEGDM 255
            M+RRYD  TTTFSPEGRL QVEYA+EAINNAG+ VGIL  DGIV+AAE+KT S LLAP KSS+K  +ID HI C VAGLTSDANIL+N AR+SAQRY   YQE  P EQLV++IC+YKQAYTQ+GG RPFGVSFL+AG+DRH GFQLY SDP+G +GGW ATAIGAN +A K++LKN++ E    T+ E LK + KV+ KTMDTTTP+AEK+EF TL       G+++H  L   ET  LL E     A  GDM
Sbjct:    1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSALLAPVKSSEKTMKIDDHIICAVAGLTSDANILVNYARVSAQRYELSYQEKQPCEQLVQAICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANNRAAKSMLKNDYKE--DMTVDEALKFSVKVMGKTMDTTTPTAEKLEFSTL--TRSANGKLIHRLLSAAETELLLKEADLQAAESGDM 250

The following BLAST results are available for this feature:

BLAST of NO01G00750 vs. NCBI_GenBank

BLAST of NO01G00750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
CBN74912.1	3.700e-92	68.50	proteasome subunit [Ectocarpus siliculosus]	[more]
XP_008862013.1	4.600e-87	66.54	hypothetical protein H310_00856 [Aphanomyces invad...	[more]
XP_009829541.1	1.500e-85	65.75	hypothetical protein H257_06126 [Aphanomyces astac...	[more]
OEU18565.1	3.700e-84	64.59	N-terminal nucleophile aminohydrolase [Fragilariop...	[more]
OQS01033.1	4.800e-84	64.57	proteasome subunit alpha [Achlya hypogyna]	[more]
XP_009529905.1	6.300e-84	63.39	hypothetical protein PHYSODRAFT_286443 [Phytophtho...	[more]
OWZ24507.1	6.300e-84	63.39	Proteasome subunit alpha [Phytophthora megakarya]	[more]
XP_002908797.1	1.100e-83	62.99	proteasome subunit alpha, putative [Phytophthora i...	[more]
XP_008608267.1	1.100e-83	64.17	proteasome subunit alpha type-4 [Saprolegnia dicli...	[more]
OQS07108.1	1.400e-83	64.17	proteasome subunit alpha [Thraustotheca clavata]	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL006	nonsL006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR047	ncniR047	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR091	ngnoR091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK008307	NSK008307	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO01G00750.1	NO01G00750.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|576029	gene_50	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100851g1	gene1608	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO01G00750.1	NO01G00750.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO01G00750 ID=NO01G00750|Name=NO01G00750|organism=Nannochloropsis oceanica|type=gene|length=1732bp
ATGGCAAGACGCTACGATTCGTCGACCACCACGTTCTCGCCGGAAGgtgc
gttttttgcgtccttcaatctatctgcctgtatgattgttgcctgtgtct
tccccctcccaagcatcatcatgccccgttccacgtcccaaccccttccc
ccgcacctgtgtcttgagtccacggtaacagtgcagactacaccgcccct
cgcccctcgtctcatgttaccttttgcccgtctatctctgacctcctttt
cccctaccccgaaagGCCGTCTGCATCAGGTTGAGTACGCCATTGAGGCT
ATCAACAACGCCGGAACCTGCGTGGGCATCCTCTGCGCCGACGGTATAGT
CCTGGCAGCGGAACGAAAGACCACCAGCAAGCTTCTAGCACCATCTAAGT
CCAGCGACAAGATTTACCAGATCGACGGGCACATCGCCTGTGTGGTGGCG
GGCCTGACGTCTGATGCTAACATTCTGATAAACCAAGgtgcggaaagcca
agaggaaaagagaggaaacattcgggcgcgggtgaatccttaatgctctc
taaatttatgcgtgctcgtgttcgtgaatttctgtggaattctttcctcg
ctctctggcccacgcgcattgcccggaaggtgtcgagacaagctgtagaa
gaaccacacccctcatgatcttccacccccccccctccctccccctctct
ccagCCCGTCTGTCCGCCCAACGCTACCTGTACCAGTACCAAGAGACCAT
GCCCGTCGAGCAGCTCGTGCGGTCCATCTGCGACTACAAGCAGGCGTATA
CACAGTACGGAGGGCTGCGCCCTTTCGGGGTCTCCTTCCTGTTTGCCGGC
TACGACAGgtaggaaggacaccgcccccatccctccctccatccctccct
ccctccatccctccctccctccctctttccctccctccctcccatctacc
ctattttgggggggcaatgcacacacgtattcagcccttccttccttccc
cccttccctatcctccttccccagGCACCATGGTTTCCAGCTATACGAGT
CTGATCCTGCCGGGACCTTCGGGGGATGGACCGCCACAGCCATTGGCGCC
AATTTTCAGgtatgtcttccttccctctccctccttccctccctccctca
tccctccccaccccctttcgaaatggacgcctcgcttttagttcctcgtg
tgggagtgtttttccccacagtgcttcaaacggcctcttccctgcctccc
tctttcaagcccgcgctggaggatggacatcaaagataatgaacaagacg
ctcctaccaccgactccccctccctctcttcctccctccctccctcccta
gGCCGGGAAAAATCTGTTGAAGAACGAATTTCCGGAGGGGGACAAGCCTA
CGCTGGCGGAAGGTTTGAAGCTGGCGGCCAAGGTGTTGCTTAAGACGATG
GATACCACCACGCCGTCCGCGGAGAAGgtaagggagggagggaaggaggg
atgtagggataaattgactcgacggggaacgatagcaagtcaacccggcc
atgcatcgggcactcaaccatatcatatctccctccccttttccctctag
GTGGAGTTTTTCACGCTCAAGGCCGCGGAGAAGGTGGGGGGGAGGGTGGT
TCACGCCACGCTGGGGACGGAGGAGACGACAGCCTTATTGAACGAGGTCA
GCGCAGCCACTGCCCCTGAGGGGGACATGTAA

protein sequence of NO01G00750.1

>NO01G00750.1-protein ID=NO01G00750.1-protein|Name=NO01G00750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=255bp
MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILCADGIVLAAERK
TTSKLLAPSKSSDKIYQIDGHIACVVAGLTSDANILINQARLSAQRYLYQ
YQETMPVEQLVRSICDYKQAYTQYGGLRPFGVSFLFAGYDRHHGFQLYES
DPAGTFGGWTATAIGANFQAGKNLLKNEFPEGDKPTLAEGLKLAAKVLLK
TMDTTTPSAEKVEFFTLKAAEKVGGRVVHATLGTEETTALLNEVSAATAP
EGDM*

Synonyms

Publications