NO01G00740, NO01G00740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00740 vs. NCBI_GenBank
Match: XP_001415861.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO94153.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 113.6 bits (283), Expect = 4.400e-22 Identity = 53/124 (42.74%), Postives = 81/124 (65.32%), Query Frame = 0 Query: 1 MRLLSHNVLRNTAKGVVEGFPLKIEAQQIEVRDTEPDLPFMRHLLPTLSFPCLRSAAKDLGLDVAAFPESLTEALAQDEEFLKALHKTLFDVHVLEGALICPETGRRFSIVGGVVDMMMKDEEV 125 MRLL+HN+L AKGVV GFPLKI ++ + + + F+ H+LP + + +AAK++GL+ P + + A DEEFL+ H L +VHV EG L+CPE+GR+F I G+ +M++ ++EV Sbjct: 1 MRLLAHNMLACNAKGVVNGFPLKIVPKETREVEVDFNAEFLTHMLPKMEWSAFVNAAKEIGLE--GLPSEIPDDAASDEEFLRTFHHALLEVHVEEGTLVCPESGRKFPINKGIPNMLLNEDEV 122
BLAST of NO01G00740 vs. NCBI_GenBank
Match: GAU93092.1 (hypothetical protein RvY_05080 [Ramazzottius varieornatus]) HSP 1 Score: 113.6 bits (283), Expect = 4.400e-22 Identity = 56/125 (44.80%), Postives = 85/125 (68.00%), Query Frame = 0 Query: 1 MRLLSHNVLRNTA-KGVVEGFPLKIEAQQIEVRDTEPDLPFMRHLLPTLSFPCLRSAAKDLGLDVAAFPESLTEALAQDEEFLKALHKTLFDVHVLEGALICPETGRRFSIVGGVVDMMMKDEEV 125 M+LL+HN+L + A KGV EG+PL+++A+ +E+R++E + F+ LLP + + L +AAKD G + P +L E A EEFLK LH L +V V+ G LICPE+GR F + G+ +M++K EE+ Sbjct: 29 MKLLTHNMLTSKAIKGVQEGYPLRVKAETVEIRESEFNKDFLVRLLPKIHYDALYAAAKDAG-HLDELPGTLPEDAASSEEFLKKLHHALLEVEVITGELICPESGRSFPVQNGIPNMLLKPEEI 152
BLAST of NO01G00740 vs. NCBI_GenBank
Match: XP_018482107.1 (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Raphanus sativus]) HSP 1 Score: 113.2 bits (282), Expect = 5.800e-22 Identity = 53/124 (42.74%), Postives = 81/124 (65.32%), Query Frame = 0 Query: 1 MRLLSHNVLRNTAKGVVEGFPLKIEAQQIEVRDTEPDLPFMRHLLPTLSFPCLRSAAKDLGLDVAAFPESLTEALAQDEEFLKALHKTLFDVHVLEGALICPETGRRFSIVGGVVDMMMKDEEV 125 MRL++HN+L KGV GFPLKIEA+++ ++ + + F+RH+ + + L AA+ LG + PE A A+DE LK LH L ++H+ EGAL+CPETGRRF + G+ +M++ ++EV Sbjct: 1 MRLITHNMLSCNIKGVANGFPLKIEAERVIEKEVDFNPDFLRHMFAKIEWKALVEAARSLG--YSELPEDSPAAAAEDESLLKKLHHALLELHLEEGALVCPETGRRFPVTKGIPNMLLHEDEV 122
BLAST of NO01G00740 vs. NCBI_GenBank
Match: XP_003056490.1 (methyltransferase-associated protein [Micromonas pusilla CCMP1545] >EEH59866.1 methyltransferase-associated protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 111.7 bits (278), Expect = 1.700e-21 Identity = 56/124 (45.16%), Postives = 76/124 (61.29%), Query Frame = 0 Query: 1 MRLLSHNVLRNTAKGVVEGFPLKIEAQQIEVRDTEPDLPFMRHLLPTLSFPCLRSAAKDLGLDVAAFPESLTEALAQDEEFLKALHKTLFDVHVLEGALICPETGRRFSIVGGVVDMMMKDEEV 125 MRLL+HN+L + KG GFPLK+E E R TE D F+ H LP L++ R+AA+ LG+D P + E EFL+ H L ++ V EG LICPETGRRF + G+ +MM+ ++EV Sbjct: 1 MRLLTHNLLASNVKGTTAGFPLKLEVLVKEERSTEFDAAFLLHTLPKLNWSAFRAAAESLGVD--KLPSTYPERDELTNEFLRVFHHALLEIEVQEGYLICPETGRRFPVRKGIPNMMLNEDEV 122
BLAST of NO01G00740 vs. NCBI_GenBank
Match: CCA15208.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 111.7 bits (278), Expect = 1.700e-21 Identity = 55/124 (44.35%), Postives = 83/124 (66.94%), Query Frame = 0 Query: 1 MRLLSHNVLRNTAKGVVEGFPLKIEAQQIEVRDTEPDLPFMRHLLPTLSFPCLRSAAKDLGLDVAAFPESLTEALAQDEEFLKALHKTLFDVHVLEGALICPETGRRFSIVGGVVDMMMKDEEV 125 MRL++HN+L KGV GFPL+IEA++IEV ++E F++ LL L + +AAK L L P LTE + +D++ +K++H +FDVH+ +G LICPE+ R F IV G+ +M++ D+EV Sbjct: 1 MRLVTHNMLMCNKKGVTNGFPLRIEAEEIEVIESEFRPEFLKKLLGKLDYFAFLNAAKSLKL-AEELPPCLTENVYEDDQAMKSIHHVMFDVHIKKGRLICPESNREFPIVDGIPNMLLNDDEV 123
BLAST of NO01G00740 vs. NCBI_GenBank
Match: PSC74830.1 (multifunctional methyltransferase subunit TRM112 At1g22270 [Micractinium conductrix]) HSP 1 Score: 111.7 bits (278), Expect = 1.700e-21 Identity = 49/123 (39.84%), Postives = 81/123 (65.85%), Query Frame = 0 Query: 1 MRLLSHNVLRNTAKGVVEGFPLKIEAQQIEVRDTEPDLPFMRHLLPTLSFPCLRSAAKDLGLDVAAFPESLTEALAQDEEFLKALHKTLFDVHVLEGALICPETGRRFSIVGGVVDMMMKDEE 124 M+LL+HN+L KGV GFP KIEA+++EV++ + + F++H+ P + + L AA +G V P TE + +D+ F+K H L +VH+ EGAL+CPETGR+F + G+ ++++ ++E Sbjct: 1 MKLLTHNMLACHIKGVQNGFPFKIEAEKVEVQEADFEPDFLQHIFPRIQWAALCEAAAAMG--VEGLPAEATEEMLEDDAFMKKFHHALLEVHLQEGALVCPETGRKFPVSAGIPNLLLTEDE 121
BLAST of NO01G00740 vs. NCBI_GenBank
Match: XP_022838230.1 (Uncharacterised protein family UPF0434/Trm112 [Ostreococcus tauri] >CEF96672.1 Uncharacterised protein family UPF0434/Trm112 [Ostreococcus tauri]) HSP 1 Score: 111.3 bits (277), Expect = 2.200e-21 Identity = 53/124 (42.74%), Postives = 81/124 (65.32%), Query Frame = 0 Query: 1 MRLLSHNVLRNTAKGVVEGFPLKIEAQQIEVRDTEPDLPFMRHLLPTLSFPCLRSAAKDLGLDVAAFPESLTEALAQDEEFLKALHKTLFDVHVLEGALICPETGRRFSIVGGVVDMMMKDEEV 125 MRLL+HN+L AKGVV GFPLKI ++ +TE + F+ H+LP + + +AA+++G P + + A +EEFL+A H L +VHV EG L+CPE+GR+F I G+ +M++ ++EV Sbjct: 1 MRLLAHNMLACNAKGVVNGFPLKIVVKETRETETEFNAEFLVHMLPKMEWAAFVNAAREIG--AGELPGEIPDDAATNEEFLQAFHHALLEVHVEEGTLVCPESGRKFPINKGIPNMLLNEDEV 122
BLAST of NO01G00740 vs. NCBI_GenBank
Match: XP_009380202.1 (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 111.3 bits (277), Expect = 2.200e-21 Identity = 51/124 (41.13%), Postives = 78/124 (62.90%), Query Frame = 0 Query: 1 MRLLSHNVLRNTAKGVVEGFPLKIEAQQIEVRDTEPDLPFMRHLLPTLSFPCLRSAAKDLGLDVAAFPESLTEALAQDEEFLKALHKTLFDVHVLEGALICPETGRRFSIVGGVVDMMMKDEEV 125 MRLL+HN+L KGV GFPL++EA++ ++ E + F+RH+ P + + L AA+ +D PE A+ E+FL+ H L ++HV EGAL+CPETGR F I G+ +M++ ++EV Sbjct: 1 MRLLTHNMLSCNIKGVTNGFPLRLEAEKWVEKEVELNADFLRHIFPKIEWKALAGAAR--AVDYCELPEEADAAMLDSEDFLRRFHHALLEIHVEEGALVCPETGRGFPITKGIPNMLLHEDEV 122
BLAST of NO01G00740 vs. NCBI_GenBank
Match: XP_002964360.1 (multifunctional methyltransferase subunit TRM112 homolog A [Selaginella moellendorffii] >XP_002967941.1 multifunctional methyltransferase subunit TRM112 homolog A [Selaginella moellendorffii] >EFJ31288.1 hypothetical protein SELMODRAFT_88231 [Selaginella moellendorffii] >EFJ34693.1 hypothetical protein SELMODRAFT_438712 [Selaginella moellendorffii]) HSP 1 Score: 109.8 bits (273), Expect = 6.400e-21 Identity = 50/124 (40.32%), Postives = 79/124 (63.71%), Query Frame = 0 Query: 1 MRLLSHNVLRNTAKGVVEGFPLKIEAQQIEVRDTEPDLPFMRHLLPTLSFPCLRSAAKDLGLDVAAFPESLTEALAQDEEFLKALHKTLFDVHVLEGALICPETGRRFSIVGGVVDMMMKDEEV 125 MRLL+HN+L KGV +GFPL IE ++E + E + F+RH P + + + AAK LG V PE + ++ D++FL+ H L ++H+ EG L+CPETGR+F + G+ +M++ ++EV Sbjct: 1 MRLLTHNMLSCNIKGVSKGFPLGIEVAKLETKTVEFNPQFLRHSFPKIEWKAFQEAAKTLG--VNDLPEQVEPSMLDDDDFLRRFHHALLEIHLEEGDLVCPETGRKFPVAKGIPNMLLNEDEV 122
BLAST of NO01G00740 vs. NCBI_GenBank
Match: PIA52154.1 (hypothetical protein AQUCO_01000199v1 [Aquilegia coerulea]) HSP 1 Score: 109.4 bits (272), Expect = 8.300e-21 Identity = 49/124 (39.52%), Postives = 82/124 (66.13%), Query Frame = 0 Query: 1 MRLLSHNVLRNTAKGVVEGFPLKIEAQQIEVRDTEPDLPFMRHLLPTLSFPCLRSAAKDLGLDVAAFPESLTEALAQDEEFLKALHKTLFDVHVLEGALICPETGRRFSIVGGVVDMMMKDEEV 125 MRLL+HN+L + KGV GFPL +E Q+ + + + F++++ P + + L +AAK +G A PE + ++ + E+FL+ H L ++H+ EGALICPETGRRF++ G+ +M++ ++EV Sbjct: 1 MRLLTHNMLSSNIKGVANGFPLGLEVQKFVEKQVDFNPDFLKNMFPKIEWKALVTAAKTMG--YAELPEEVESSMLESEDFLQKFHHALLELHLEEGALICPETGRRFAVTKGIPNMLLHEDEV 122 The following BLAST results are available for this feature:
BLAST of NO01G00740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00740 ID=NO01G00740|Name=NO01G00740|organism=Nannochloropsis oceanica|type=gene|length=607bpback to top protein sequence of NO01G00740.1 >NO01G00740.1-protein ID=NO01G00740.1-protein|Name=NO01G00740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=126bpback to top Synonyms
Publications
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