NO01G00690, NO01G00690 (gene) Nannochloropsis oceanica

Overview
NameNO01G00690
Unique NameNO01G00690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2911
Alignment locationchr1:174664..177574 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:174664..177574 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G00690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00690.1NO01G00690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|228958gene_44Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00690.1NO01G00690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00690 ID=NO01G00690|Name=NO01G00690|organism=Nannochloropsis oceanica|type=gene|length=2911bp
ATGGGGAGGAGGAGGAGGGGGGGGGGAGGAGGGAGGGAGGGAGGAAGGGG
GGAGGAAGGGGAGGATGACGATTTGTTGAGCGAGATGCCGACGGCGGAGT
GTTCCATCAAGAAGGTGAAAGTTATGGGTGCGAGAGGGACGGAGCTCGTG
GAGGAGGGGGAAGAGAAGAAGGGAATAGGAGGGAGGGGAGGAGAAGGAGG
GGGAGGAGGAGGCTCAGACGCGGAATCGAGCGTGGTGGATGAAGAGGGGG
AAGGGAAGATGGTTGGGATGGAGGGAGGGGCGCCCTTTAATCCTCCTCTA
CACATCCCGCCCTCGTCCTCCGTCATTACTATTCATCATTCTTCGCCCCC
CACCCCTTCCAAGTCATCATCCACCACCACTGCCACAGCTGCTGGTACTG
CTGGCACCGCTGCTGGTACTGGCGGCACCGCTGGTGGTGCTACTGGTGGT
GGTGCAGGTGCTGGTCCTGCGTCCCTCCCTCCCGTCCTTCCCTTCCGCCC
CACTCTCACCCGCGCTAAATCCTCCTCCCTTAACATGCAGCAGCTCCTCG
TCACGGCCATTAACGAGGGCCTCCGTCGATCCCCCTCCGGTCTTAATCTC
GAGGACCTCTCGCACACCCACCCCTCCCCCGCCCAGCAGCACCAGCAGCT
TGGCAGTCAGTCTCTCGCCTCCTCCCCCGCTCCTTCCTCCTCCACCTCCT
CCTCCTCCTGCACCTCCCCCTCTTCTGCCAAAGCTGTCGCGGCAGCAGCG
ATAGCAGGAGGGGGAGTAGGAGGAGGAGGAGGAGGAGGCGGAGGAGGAGG
AGGAGGAGTAGGAGTCCGTGTGGGGGGAGTTGCCCAACACACCCCTTCGC
CTCTCTCTCTTCATGCCATAGGATCAGGAGGAAGGGATGGAGGAAGGGAA
GCAGGACGACCACCCCCCAGCCCCTCCGCCGCTGCTTCCTCCCTCCCGTC
ATCCTTTCCTTCCTCCTCTCTCTATACTGGTAGCGAGATGACAGCAGCAG
CAGCAGGAGGAGGAGGAGAAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGT
GGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGGATATCTGCCCCTGCCCATCTTCCTC
CTCCCGCCAGCCCTTATGGCCTTCCCCCAAAATCTCCGTCGTCTCGACGC
TGTAAGGAAATACAACAACAGCAGCAGCAGATGGAGGAGAAGGACGACGA
CGAGGAGGAGGAGGTGGTGGTGCAAGAGCTTGAAGAAAAGAAGGAGGGGG
AGGAGAAAAATAAGGAAGGAGAGAAGGAAGGTGGAAGGAAGGAGAAGGAG
AAAAAGAAAAAAAGGAAAAGGAAAAAGAAGGAGGGTGAGGGAAACATAAA
AGGTGAGGTGGAGGTTGAAGAAGGAGAGGAGGAGGAGGAAGAGGAGGAAG
AGGATGAAGAGGAGGAAGAGGAGGAAGAGGAGGAGGGGAAGAGATACCGT
CCACTCAGGTTAGGCGAAGGGGAGCGCTCTTTCAGTCTCACCCTGTGTCA
TCCACAAGGCTGCTGCTCCTCCTCCTCTTCCTCCTCCCCCTCCTCCTCCT
CTCCGTCATCAGAAGGAGAAGAGGAGGGAGAGGGAGGAGGAAAGAGAAAG
GGGGAGGGTCGCCACGATCCGATCTCCTCCTCCTCCTGCCCTCCCTTTTC
CACTTCCCACGACACCATTTCCCCCTCTTCCTCCCCCTCTTCCTCTTCCT
CTTCCTCCCTCGTGTCCTCATTCCGTCGTCTCTCGAGCAGTGACGCCAGC
CTCGGTCTGAGCGAATCAACAGCTACCGTGGCAACCGGCCCGAGGGAAGG
AGGGAGAGAGGGGGGGAGGGAGGGGAGTCATAAAAGATTGGAGACGATTA
GTCAGAAGGATGCGGATGAGGAGCAGGAGGAAGAGGAGGAGGCGATGGAG
GGGGAGGGGGAGGGAGGGAGGGAGGGGGGGTGTTGGTGGGACGGAGgtcc
gggaggacgacggggagcaggtcgagtatgacgctattgatagCCACCGA
GGTGAAGGGCAAGCCAACCGAGgtaggtactgaaagagggagggagggag
ggagggaggaagagtagtacgttctcaacgtcaagagcaagcaatactca
ccttccctcccccttccctccatccctccctccctccctcccttcttcct
cagGTGGAGTTTGAATTCGATCTTGCGAAGGACTCTCCGGCTGCTGTGGC
GAAGGAGATGGTAATGGAGCTTGATATTCCTCTGAGGGAGATGGAGGGCT
TGGCACTTCAGATCGCGGCGTTGAAGGAAGAGGTGTTGAGAAAGAGGAAG
GAGAGGAGGGAGGAGAAGAGGAGGAGGAGGGAGAGGAGGCGGAGGAGTCG
TAGTCAGGTGGGGGAGGAGTCGGAGGAGGAGGAAGAGGAGGAGGGCGAGG
AGGAGGAGGAGGGAGGGGAAGAGGAAGGTCGCTCCTCTTCTCCGGAGACT
CGTGAGCTGGCCATTACGTCATCGGCTGCTCTAACAAGCTTTGGTCGCCT
TCCCTCCCGCCCTCCCTCCCGCCCTCCCTCCCGCCCTTCCTCTCCTGCCC
AACCCAACCGCCCCCCTGTCTCCCGCACAGGACTCGACGGAGACATGCCT
CACGGCAGCAGTGGCAAGAGCAACAATAACAACAACAACAACAACAACAA
CAGCAGCAGCAGCAGCAGCACCGGCGGCGGCTCTCCCGTCCTTCCATCCC
TCCCTCCCTCCCTCCCTACCTTTGTTCTCCCCCCGCCCGGCGTGGGCTCG
AGCCGTTCCCTTCCTACTGGCCTACATCCCACTGCGTCCTCCCCCCCCCC
TCCCTCCCTCCCACCCGAGTCACGACTCCCGACTCCCTCTCTCGGTCCAG
CCACCACCTGA
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protein sequence of NO01G00690.1

>NO01G00690.1-protein ID=NO01G00690.1-protein|Name=NO01G00690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=911bp
MGRRRRGGGGGREGGRGEEGEDDDLLSEMPTAECSIKKVKVMGARGTELV
EEGEEKKGIGGRGGEGGGGGGSDAESSVVDEEGEGKMVGMEGGAPFNPPL
HIPPSSSVITIHHSSPPTPSKSSSTTTATAAGTAGTAAGTGGTAGGATGG
GAGAGPASLPPVLPFRPTLTRAKSSSLNMQQLLVTAINEGLRRSPSGLNL
EDLSHTHPSPAQQHQQLGSQSLASSPAPSSSTSSSSCTSPSSAKAVAAAA
IAGGGVGGGGGGGGGGGGGVGVRVGGVAQHTPSPLSLHAIGSGGRDGGRE
AGRPPPSPSAAASSLPSSFPSSSLYTGSEMTAAAAGGGGEGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGISAPAHLPPPASPYGLPPKSPSSRR
CKEIQQQQQQMEEKDDDEEEEVVVQELEEKKEGEEKNKEGEKEGGRKEKE
KKKKRKRKKKEGEGNIKGEVEVEEGEEEEEEEEEDEEEEEEEEEEGKRYR
PLRLGEGERSFSLTLCHPQGCCSSSSSSSPSSSSPSSEGEEEGEGGGKRK
GEGRHDPISSSSCPPFSTSHDTISPSSSPSSSSSSSLVSSFRRLSSSDAS
LGLSESTATVATGPREGGREGGREGSHKRLETISQKDADEEQEEEEEAME
GEGEGGREGGCWWDGATEVKGKPTEVEFEFDLAKDSPAAVAKEMVMELDI
PLREMEGLALQIAALKEEVLRKRKERREEKRRRRERRRRSRSQVGEESEE
EEEEEGEEEEEGGEEEGRSSSPETRELAITSSAALTSFGRLPSRPPSRPP
SRPSSPAQPNRPPVSRTGLDGDMPHGSSGKSNNNNNNNNNNSSSSSSTGG
GSPVLPSLPPSLPTFVLPPPGVGSSRSLPTGLHPTASSPPPPSLPPESRL
PTPSLGPATT*
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Synonyms
Publications