NO01G00660, NO01G00660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_057025988.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium yuanmingense] >KRQ02860.1 pterin-4-alpha-carbinolamine dehydratase [Bradyrhizobium yuanmingense]) HSP 1 Score: 126.7 bits (317), Expect = 5.600e-26 Identity = 60/92 (65.22%), Postives = 76/92 (82.61%), Query Frame = 0 Query: 38 RLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 RLS +A + AL LPGW DV+GRDA+ KT++FKDF EA+GFM+RAAL+AEK DHHPEW NVY V VVL+THDAGGV+ +D+A+ KAM+A+ Sbjct: 4 RLSAEARRQALG-GLPGWTDVQGRDAIGKTFVFKDFNEAFGFMTRAALVAEKMDHHPEWRNVYKTVEVVLSTHDAGGVTARDMALAKAMNAI 94
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_057842725.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium retamae] >KRR28747.1 pterin-4-alpha-carbinolamine dehydratase [Bradyrhizobium retamae] >KRR28770.1 pterin-4-alpha-carbinolamine dehydratase [Bradyrhizobium retamae]) HSP 1 Score: 125.9 bits (315), Expect = 9.500e-26 Identity = 58/92 (63.04%), Postives = 75/92 (81.52%), Query Frame = 0 Query: 38 RLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 RLS +A K AL +LPGW++ GRDA+ +T+ FKDF EA+GFMSRAAL+AEK+DHHPEW NVY V VVL THDAGGV+++D+ + KAM+A+ Sbjct: 4 RLSAEARKSALA-ELPGWSETAGRDAIARTFTFKDFNEAFGFMSRAALVAEKNDHHPEWKNVYKTVEVVLATHDAGGVTKRDIDLAKAMNAI 94
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_027285181.1 (4a-hydroxytetrahydrobiopterin dehydratase [Rubritepida flocculans]) HSP 1 Score: 125.6 bits (314), Expect = 1.200e-25 Identity = 53/89 (59.55%), Postives = 71/89 (79.78%), Query Frame = 0 Query: 42 QAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDALV 131 +A + AL LP W ++GRDA+++ + F+DF AWGFM+R ALLAE+ DHHPEWFNVYN+V + LTTHDAGG+S +DVA+ +A+DALV Sbjct: 7 EAARAALPELLPEWRVLEGRDAIQRAFRFRDFNAAWGFMARVALLAERQDHHPEWFNVYNRVEITLTTHDAGGLSARDVALARAIDALV 95
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_028133355.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium japonicum]) HSP 1 Score: 125.2 bits (313), Expect = 1.600e-25 Identity = 60/92 (65.22%), Postives = 75/92 (81.52%), Query Frame = 0 Query: 38 RLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 RLS +A K L + LPGW +V+GRDA+ KT++FKDF EA+GFM+RAAL+AEK DHHPEW NVY V VVL+THDAGGV+ DVA+ KAM+A+ Sbjct: 4 RLSAEARKQTL-VGLPGWNEVQGRDAIGKTFIFKDFNEAFGFMTRAALVAEKMDHHPEWRNVYKTVEVVLSTHDAGGVTALDVALAKAMNAI 94
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_025033148.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium sp. DOA9] >GAJ32119.1 putative pterin-4-alpha-carbinolamine dehydratase [Bradyrhizobium sp. DOA9]) HSP 1 Score: 124.8 bits (312), Expect = 2.100e-25 Identity = 59/92 (64.13%), Postives = 75/92 (81.52%), Query Frame = 0 Query: 38 RLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 RL+ +A + AL L GW +V+GRDA+ KT++FKDF EA+GFMSRAAL+AEK DHHPEW NVY V VVL+THDAGGV+ +D+A+ KAMDA+ Sbjct: 4 RLTAEARRQALG-GLAGWTEVQGRDAIGKTFVFKDFNEAFGFMSRAALVAEKMDHHPEWRNVYKTVEVVLSTHDAGGVTARDIALAKAMDAI 94
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_065732224.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium icense] >ANW05091.1 4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium icense]) HSP 1 Score: 124.8 bits (312), Expect = 2.100e-25 Identity = 57/92 (61.96%), Postives = 76/92 (82.61%), Query Frame = 0 Query: 38 RLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 RLS +A K AL ++LPGW++ GR+A+ +T+ FKDF EA+GFMSRAAL+AEK+DHHPEW NVY V VVL THDAGGV+++D+ + KAM+A+ Sbjct: 4 RLSAEARKSAL-VELPGWSETAGREAIARTFTFKDFNEAFGFMSRAALVAEKNDHHPEWKNVYKTVEVVLATHDAGGVTRRDIDLAKAMNAI 94
BLAST of NO01G00660 vs. NCBI_GenBank
Match: OJY14171.1 (4a-hydroxytetrahydrobiopterin dehydratase [Rhizobiales bacterium 62-47]) HSP 1 Score: 124.8 bits (312), Expect = 2.100e-25 Identity = 57/95 (60.00%), Postives = 75/95 (78.95%), Query Frame = 0 Query: 38 RLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDALVVE 133 RLS +A + AL +L GW+DV GR+A+ +T++FKDF EA+GFMSRAAL+AEK DHHPEW NVY V VVL THDAGGV+ +DV + +AM+A+ + Sbjct: 4 RLSAEARRAAL-RELKGWSDVSGREAITRTFIFKDFNEAFGFMSRAALVAEKSDHHPEWRNVYKTVEVVLATHDAGGVTARDVTLARAMNAIAAQ 97
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_006023426.1 (MULTISPECIES: 4a-hydroxytetrahydrobiopterin dehydratase [Afipia] >EKS34813.1 hypothetical protein HMPREF9695_04723 [Afipia broomeae ATCC 49717] >OUX60689.1 4a-hydroxytetrahydrobiopterin dehydratase [Afipia sp. TMED4]) HSP 1 Score: 124.4 bits (311), Expect = 2.800e-25 Identity = 58/94 (61.70%), Postives = 75/94 (79.79%), Query Frame = 0 Query: 36 VPRLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 V RLS +A + AL + L GW+DV GRDA+ KT+ F+DF EA+GFM+RAAL+AEK DHHPEW NVY V VVL+THDAGGV+ +D+A+ +AMD + Sbjct: 2 VERLSAEARRAAL-VKLKGWSDVSGRDAIAKTFTFRDFNEAFGFMTRAALVAEKSDHHPEWRNVYKTVEVVLSTHDAGGVTARDIALAEAMDRI 94
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_027573060.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium sp. WSM1743]) HSP 1 Score: 124.4 bits (311), Expect = 2.800e-25 Identity = 59/92 (64.13%), Postives = 74/92 (80.43%), Query Frame = 0 Query: 38 RLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 RLS +A K AL LPGW + +GRDA+ KT++FKDF EA+GFM+RAAL+AEK DHHPEW NVY V VVL+THDAGGV+ +D A+ KAM+A+ Sbjct: 4 RLSAEARKQALG-GLPGWTEAQGRDAIGKTFVFKDFNEAFGFMTRAALVAEKMDHHPEWRNVYKTVEVVLSTHDAGGVTARDTALAKAMNAI 94
BLAST of NO01G00660 vs. NCBI_GenBank
Match: WP_100420470.1 (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium lablabi] >PJJ16688.1 pterin-4-alpha-carbinolamine dehydratase [Bradyrhizobium lablabi]) HSP 1 Score: 124.4 bits (311), Expect = 2.800e-25 Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 0 Query: 38 RLSPQAVKVALTMDLPGWADVKGRDALEKTYLFKDFGEAWGFMSRAALLAEKHDHHPEWFNVYNKVHVVLTTHDAGGVSQKDVAMGKAMDAL 130 RLS +A K AL +L GWA+V GR+A+ +T+ FKDF EA+GFMSRAAL+AEKHDHHPEW NVY V VVL THDAGGV++ D+ + KAM+ + Sbjct: 4 RLSAEARKAALG-ELSGWAEVSGREAIARTFTFKDFNEAFGFMSRAALVAEKHDHHPEWRNVYKTVEVVLATHDAGGVTRLDIQLAKAMNGI 94 The following BLAST results are available for this feature:
BLAST of NO01G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00660 ID=NO01G00660|Name=NO01G00660|organism=Nannochloropsis oceanica|type=gene|length=2138bpback to top protein sequence of NO01G00660.1 >NO01G00660.1-protein ID=NO01G00660.1-protein|Name=NO01G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=139bpback to top Synonyms
Publications
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