NO01G00630, NO01G00630 (gene) Nannochloropsis oceanica

Overview
NameNO01G00630
Unique NameNO01G00630
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1473
Alignment locationchr1:165088..166560 -

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Properties
Property NameValue
DescriptionPyridoxamine phosphate
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:165088..166560 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011576Pyridox_Oxase_FMN-bd
Vocabulary: Molecular Function
TermDefinition
GO:0048037cofactor binding
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO01G00630 vs. NCBI_GenBank
Match: XP_002491487.1 (Putative protein of unknown function [Komagataella phaffii GS115] >CAY69207.1 Putative protein of unknown function [Komagataella phaffii GS115] >AOA62387.1 GQ67_00627T0 [Komagataella phaffii] >AOA67861.1 GQ68_00761T0 [Komagataella phaffii GS115] >SOP81030.1 FMN-binding split barrel [Komagataella phaffii CBS 7435])

HSP 1 Score: 80.5 bits (197), Expect = 9.400e-12
Identity = 55/185 (29.73%), Postives = 90/185 (48.65%), Query Frame = 0
Query:   97 PPTVVALLHSTRVCHLSTTSSDGLPHLSLMRFTYRQEEE--------------VIIMTTRTDTKKYELLCSSPKVAVLVHDFPSLXXXXXXXXXXXXXXXXXXXXXXXVQDVDDGAGEGHTYAITLNGVAHVQKGE-EAERFRALHLVNNIAYRQFIEGEKIAVFTVHVMSARICNVKDRVTYWD 267
            PP V+ LL S +  HL  TS+D +PH+SLM +TY   EE              VII+TT  DT KY  + ++P V++LVHD+ +                        V           + + TL G AH+   E + E ++  HL NN   + FI+G+ +A+  V V+S+++ + ++ V+ ++
Sbjct:    3 PPQVLQLLKSAKYIHLG-TSADDIPHVSLMNYTYVSPEEVLKEGFPLSDASHSVIILTTDKDTVKYNNMRANPSVSILVHDWVTKSNSLEAGANHLLSFLKNLNQNELV-----------STSATLAGKAHILSDEKQIEYYKKKHLENNPEGKVFIDGDNVAIVLVQVLSSKVADTENNVSEYN 175          
BLAST of NO01G00630 vs. NCBI_GenBank
Match: ANZ75953.1 (BA75_02594T0 [Komagataella pastoris])

HSP 1 Score: 80.5 bits (197), Expect = 9.400e-12
Identity = 55/185 (29.73%), Postives = 90/185 (48.65%), Query Frame = 0
Query:   97 PPTVVALLHSTRVCHLSTTSSDGLPHLSLMRFTYRQEEE--------------VIIMTTRTDTKKYELLCSSPKVAVLVHDFPSLXXXXXXXXXXXXXXXXXXXXXXXVQDVDDGAGEGHTYAITLNGVAHVQKGE-EAERFRALHLVNNIAYRQFIEGEKIAVFTVHVMSARICNVKDRVTYWD 267
            PP V+ LL S +  HL  TS+D +PH+SLM +TY   EE              VII+TT  DT KY  + ++P V++LVHD+ +                        V           + + TL G AH+   E + E ++  HL NN   + FI+G+ +A+  V V+S+++ + ++ V+ ++
Sbjct:    3 PPQVLQLLKSAKYIHLG-TSADDIPHVSLMNYTYVSPEEVLKEGFPLSDSSHSVIILTTDKDTVKYNNMRANPSVSILVHDWVTKTNSIEAGANHLLSFLKNLNQNELV-----------STSATLAGKAHILSDEKQIEYYKKKHLENNPEGKVFIDGDNVAIVLVQVLSSKVADTENNVSEYN 175          
BLAST of NO01G00630 vs. NCBI_GenBank
Match: ORY86802.1 (hypothetical protein BCR37DRAFT_385277 [Protomyces lactucaedebilis])

HSP 1 Score: 80.5 bits (197), Expect = 9.400e-12
Identity = 64/196 (32.65%), Postives = 91/196 (46.43%), Query Frame = 0
Query:   96 LPPTVVALLHSTRVCHLSTTSSDGLPHLSLMRFTY-----------RQEEEVIIMTTRTDTKKYELLCSSPKVAVLVHDFPSLXXXXXXXXXXXXXXXXXXXXXXXVQDVDDGAGEGHTYAITLNGVAHVQKGEEAERFRALHLVNNIA--YRQFIEGEKIAVFTVHVMSARICNVKDRVTYWDKHTAVKAAKEQE 279
            LP  VV+ L + R  HL  T SD  PH+SLM + Y           + +E+ +IMT    TKK+  L  +PKV+VLVHD+ +                               A     Y+ITLNG A V +GE +E F+   L +++    R +++GE  AV  VH  SARI + ++ V  W KH   +    QE
Sbjct:    8 LPADVVSCLTNARYLHLG-TCSDNWPHVSLMNYLYIRAGQGTEHTSKPDEDCVIMTCSRKTKKFFHLSMNPKVSVLVHDWSTRQQVTNSSDLTQLLSSL-------------NAASLSKYSITLNGTAEVLEGEHSEYFKKRILDSSVGSEARCYMDGEDTAVIAVHFGSARISDKENNVNKW-KHQDSEMTPGQE 188          
BLAST of NO01G00630 vs. NCBI_GenBank
Match: EJK72617.1 (hypothetical protein THAOC_05835 [Thalassiosira oceanica])

HSP 1 Score: 79.0 bits (193), Expect = 2.700e-11
Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 0
Query:   57 PRSPSK----GKEVHAAHVGSPSKSNSNRDTMPVEGSEDIFPPLPPTVVALLHSTRVCHLSTTSSD-GLPHLSLMRFTYRQEEEVIIMTTRTDTKKYELLCSSPKVAVLVHDF 165
            PRS  +    GK V      S S+S      +P   S+ + PPLPP V  +L   R+ +LST  S+    HLSLMRFTY  EEE+IIM+T   TKKY+++     VA+L+HDF
Sbjct:   20 PRSQGRAGFCGKVVQFPENQSKSESGWVTPCVPCSSSQPLKPPLPPVVKKVLSRCRLAYLSTVDSEIHSSHLSLMRFTYLPEEELIIMSTNRMTKKYDMISRQKGVALLIHDF 132          
BLAST of NO01G00630 vs. NCBI_GenBank
Match: OUM55474.1 (hypothetical protein BVG19_g5019 [[Candida] boidinii] >OWB53491.1 hypothetical protein B5S27_g5091 [[Candida] boidinii] >OWB65938.1 hypothetical protein B5S30_g1272 [[Candida] boidinii] >OWB83648.1 hypothetical protein B5S33_g2279 [[Candida] boidinii])

HSP 1 Score: 74.7 bits (182), Expect = 5.200e-10
Identity = 51/189 (26.98%), Postives = 96/189 (50.79%), Query Frame = 0
Query:   95 PLPPTVVALLHSTRVCHLSTTSSDGLPHLSLMRFTYRQEEEV-----------------IIMTTRTDTKKYELLCSSPKVAVLVHDFPS-LXXXXXXXXXXXXXXXXXXXXXXXVQDVDDGAGEGHTYAITLNGVAHV--QKGEEAERFRALHLVNNIAYRQFIEGEKIAVFTVHVMSARICNVKDRVT 264
            PLP  V+ L+ S++  HL+ TS D +PH+SLM +T+   E++                 I++TT   T+KYE L S+P V+VLVHD+ S                         +Q+++    E  + ++TL+G A +  +  +E   ++ LHL  N + + FI+G+ +A+  + + ++++ +  + V+
Sbjct:   10 PLPENVLNLIKSSKFLHLA-TSKDNIPHVSLMNYTFVPSEKIFNSSSESSSSVSTCAPLIVVTTHKKTQKYENLKSNPNVSVLVHDWISAASSDENSIELDHNDEDSKSNILKLLQNINQ--NEISSLSVTLSGSAKILGENNDERLYYKNLHLNKNPSAKVFIDGDDVAIILIQITASKVADSDNNVS 195          
BLAST of NO01G00630 vs. NCBI_GenBank
Match: OWB56986.1 (hypothetical protein B5S28_g2907 [[Candida] boidinii] >OWB62868.1 hypothetical protein B5S29_g3816 [[Candida] boidinii] >OWB73046.1 hypothetical protein B5S31_g2778 [[Candida] boidinii] >OWB78732.1 hypothetical protein B5S32_g2932 [[Candida] boidinii])

HSP 1 Score: 74.3 bits (181), Expect = 6.800e-10
Identity = 49/183 (26.78%), Postives = 89/183 (48.63%), Query Frame = 0
Query:   95 PLPPTVVALLHSTRVCHLSTTSSDGLPHLSLMRFTYRQEEEV-------------IIMTTRTDTKKYELLCSSPKVAVLVHDFPSLXXXXXXXXXXXXXXXXXXXXXXXVQDVDDGAGEGHTYAITLNGVAHVQKGEEAER--FRALHLVNNIAYRQFIEGEKIAVFTVHVMSARICNVKDRV 263
            PLP  V+ L+ S++  HL  TS D +PH+SLM +T+   E+V             I++TT   T+KYE + S+  V+VL+HD+ S                            +    E  + ++TL+G A +   +  ER  ++ LHL  N + + FI+G+ +A+  + + ++++ +  + V
Sbjct:   10 PLPENVLTLIKSSKFLHLG-TSKDNIPHVSLMNYTFVPSEKVFNSSESSSTSAPLIVVTTHKKTQKYENINSNSNVSVLIHDWISAASNDDEKSSELINNEEDCKSNILKLLQNINQNEISSLSVTLSGSAKILNEDNEERLYYKNLHLNKNPSAKVFIDGDDVAIILIQITASKVADSDNNV 191          
BLAST of NO01G00630 vs. NCBI_GenBank
Match: PUU82718.1 (hypothetical protein B9Z19DRAFT_966856 [Tuber borchii])

HSP 1 Score: 73.9 bits (180), Expect = 8.800e-10
Identity = 62/196 (31.63%), Postives = 91/196 (46.43%), Query Frame = 0
Query:   96 LPPTVVALLHSTRVCHLSTTSSDGL-PHLSLMRFTY-----------------RQEEEVIIMTTRTDTKKYELLCSSPKVAVLVHDF----PSLXXXXXXXXXXXXXXXXXXXXXXXVQDVDDGAGEGHTYAITLNGVAHV--QKGEEAERFRALHLVNN--IAYRQFIEGEKIAVFTVHVMSARICNVKDRVTYW 266
            LPP V+A L + R  HL+T  SDGL PH+SLM +TY                      +IIMTT+  TKK   L S+P+V++LVHD+    PSL                           +  +    + + TLNG AH+     EE   ++ +HL NN     + ++EGE++ V  V +  AR+ + +  VT W
Sbjct:   10 LPPEVIACLKNARYLHLAT--SDGLWPHVSLMNYTYLPVSPYPLPATSISXXXXTPGPIIIMTTQPSTKKTLNLTSNPRVSLLVHDWVSHRPSLSSANPFAPSTSSLHQTQSASPLSTFLTNLNSAALSSISATLNGYAHLIPHGTEEEGYYKRVHLENNPQSENKCYLEGEEVRVVVVRIGWARVADFRGGVTDW 203          
BLAST of NO01G00630 vs. NCBI_GenBank
Match: EKG11640.1 (FMN-binding split barrel-related protein [Macrophomina phaseolina MS6])

HSP 1 Score: 73.6 bits (179), Expect = 1.200e-9
Identity = 66/213 (30.99%), Postives = 97/213 (45.54%), Query Frame = 0
Query:   84 MPVEGSEDIFPPLPPTVVALLHSTRVCHLSTTSSDGLPHLSLMRFTYRQEEEV-----IIMTTRTDTKKYELLCSSPKVAVLVHDFPSLXXXXXXXXXXXXXXXXXXXXXXXVQDVDDGAGEGHTYAITLNGVA-HVQKGEEAERF-RALHLVNNIAYRQ------------------------FIEGEKIAVFTVHVMSARICNVKDRVTYW 266
            MP   +  +   LP  VV  L + R  HL+T+S D +PH+SLM +TY           IIMTT   T+K   LC +P+V++LVHD+ +            XXXXXXX        +   +      +IT+NG A  V +G E E++ +A HL NN    +                        ++EGE+  V  V +   RI + K ++T W
Sbjct:    1 MPEITTPTVSSELPQEVVQCLENARYLHLATSSPDAMPHISLMNYTYLPSSPYSPTPQIIMTTPPGTQKTTNLCQNPRVSLLVHDWVTTRPPTLTSGRESXXXXXXXRSSLATLLLGMNSASLSRISITINGSATFVPRGSEEEKWLKARHLENNTFGSEVDDASNAFSTNPNVSGGGDGGRGYWVEGEETRVIAVAIKDGRISDYKGQITDW 213          
BLAST of NO01G00630 vs. NCBI_GenBank
Match: ODQ68393.1 (hypothetical protein NADFUDRAFT_81370 [Nadsonia fulvescens var. elongata DSM 6958])

HSP 1 Score: 73.6 bits (179), Expect = 1.200e-9
Identity = 51/168 (30.36%), Postives = 91/168 (54.17%), Query Frame = 0
Query:   97 PPTVVALLHSTRVCHLSTTSSDGLPHLSLMRFTYRQEEEVIIMTTRTDTKKYELLCSSPKVAVLVHDFPSLXXXXXXXXXXXXXXXXXXXXXXXVQDVDDGAGEGHTYAITLNGVAHVQKGEEAERFRALHLVNNIA-YRQFIEGEKIAVFTVHVMSARICNVKDRVT 264
            PP V +LL S R  HL+T S++  P++SLM +TY  E   II+T   D++K++ +  +P+V++LVHD+ +                        +Q+++    E    ++TL G+A V +GE+AE+++  H  NN A  + +I+G   AV  + +   +I + K+ V+
Sbjct:   10 PPEVNSLLQSARFLHLATCSNN-QPNVSLMNYTYLPESSSIILTASKDSQKFKNIIVNPQVSILVHDWTT-----------SKATLSASSLCEFLQNLNH--SEASKNSVTLYGIATVLEGEKAEQYKEKHADNNPADAKSYIDG-NFAVVEIKLKGGKIADNKNHVS 162          
BLAST of NO01G00630 vs. NCBI_GenBank
Match: XP_020074356.1 (hypothetical protein HYPBUDRAFT_163527 [Hyphopichia burtonii NRRL Y-1933] >ODV65289.1 hypothetical protein HYPBUDRAFT_163527 [Hyphopichia burtonii NRRL Y-1933])

HSP 1 Score: 73.6 bits (179), Expect = 1.200e-9
Identity = 56/177 (31.64%), Postives = 85/177 (48.02%), Query Frame = 0
Query:   96 LPPTVVALLHSTRVCHLSTTSSDGLPHLSLMRFTY--RQEEEVIIMTTRTDTKKYELLCSSPKVAVLVHDFPSLXXXXXXXXXXXXXXXXXXXXXXXVQDVDDGAGEGHTYAITLNGVAHVQKG----EEAERFRALHLVNN----IAYRQFIEGEKIAVFTVHVMSARICNVKDRV 263
            LP +VV LL STR  HL+ T  D  PH+SLM +TY  ++ E  II T+   T KYE + S+P V++LVHD+ S                            +    E  + ++ +NG A +       E+   F++LHL N+    I  + +IE E IA+  + V S ++ +  D V
Sbjct:    7 LPDSVVKLLKSTRFVHLA-TCKDNFPHVSLMNYTYYSKENEYYIITTSPKKTTKYENIISNPNVSLLVHDWISARNPDESTSDSVANKRRNSLYELL---TNLNKSEISSVSVMINGKAEILSPHTDLEKFNFFKSLHLNNDSIDAIQSKNYIESEDIALILIKVSSVKVTDTNDNV 179          
The following BLAST results are available for this feature:
BLAST of NO01G00630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002491487.19.400e-1229.73Putative protein of unknown function [Komagataella... [more]
ANZ75953.19.400e-1229.73BA75_02594T0 [Komagataella pastoris][more]
ORY86802.19.400e-1232.65hypothetical protein BCR37DRAFT_385277 [Protomyces... [more]
EJK72617.12.700e-1143.36hypothetical protein THAOC_05835 [Thalassiosira oc... [more]
OUM55474.15.200e-1026.98hypothetical protein BVG19_g5019 [[Candida] boidin... [more]
OWB56986.16.800e-1026.78hypothetical protein B5S28_g2907 [[Candida] boidin... [more]
PUU82718.18.800e-1031.63hypothetical protein B9Z19DRAFT_966856 [Tuber borc... [more]
EKG11640.11.200e-930.99FMN-binding split barrel-related protein [Macropho... [more]
ODQ68393.11.200e-930.36hypothetical protein NADFUDRAFT_81370 [Nadsonia fu... [more]
XP_020074356.11.200e-931.64hypothetical protein HYPBUDRAFT_163527 [Hyphopichi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL004nonsL004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR088ngnoR088Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008329NSK008329Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00630.1NO01G00630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668161gene_40Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100501g2gene1630Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00630.1NO01G00630.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00630 ID=NO01G00630|Name=NO01G00630|organism=Nannochloropsis oceanica|type=gene|length=1473bp
GTACGTGGAGGCACAACTCCAATTCCCCTATGAAGCGGTGTGGAAGTAAA
GTTTGTGGCTACTTGAACCTACCATATTCCCTCCGTCCTCCCAGGTCCAC
TCGGTCCAAAAGAATGTTCTCGGAGTCGACGTGTAGCGCGGATACGTGCC
GTGGAATGCAAGCCCGACGGGGAGGTGGCCCCACCAAATGCAACGTATCT
GTCTTGCCTCCTTCTTTCCGCTCCAATCGCACACCATTACATCCACAATT
CACGCCCTCCACCCATAGCTGGCACAGGGAACACTGAAGCTGGAGCCTTG
AAGGTGCAAGGACACGCTTAGAAACGACCTAGCTTCGGATAGGACCTCAT
GCCAACCCCCAGAATGGTACGGGAACCCAGCGACGGCCGCTTGACCCATC
AAGGCGCCGCCTTTCTCTTTCTCATAACCACTACAATGGCTGCAGCAGGC
GGTGCAGCCCTTGTCCTCTTATTGCAGCACCGCGGCACTCTCCCTCCACC
TCCACGCCGACAAGCACCACGCTCGCCAAGCAAGGGCAAAGAAGTGCATG
CCGCCCACGTTGGCAGCCCTAGCAAAAGCAACAGCAATCGGGACACTATG
CCTGTGGAAGGGAGCGAGGATATCTTCCCTCCTTTGCCCCCCACCGTGGT
GGCTTTGCTTCACTCCACCCGTGTCTGTCACCTGAGTACTACCAGCTCGG
ATGGCTTACCGCATTTGTCCCTAATGCGGTTCACTTACCGACAGGAGGAG
GAAGTAATTATAATGACAACGCGGACCGACACCAAGAAGTATGAGCTGTT
GTGTTCGAGCCCCAAGGTTGCTGTCTTGGTACATGATTTCCCGTCGTTAC
GGAAGGAGGAGGAAGAGGAGGAAGAGGAGGTGGGAGGGAGTAAGGGAGGG
GGGGAGGGAGGGTCGACGGTCCAGGACGTAGATGACGGAGCAGGAGAAGG
GCACACATACGCGATAACTTTAAATGGCGTGGCACATGTGCAAAAGGGAG
AGGAGGCAGAGAGGTTTCGGGCGCTGCACTTGGTGAATAATATTGCTTAC
AGGCAGTTCATCGAGGGGGAAAAGATCGCTGTGTTTACGGTGCATGTGAT
GAGTGCACGAATATGCAATGTGAAAGACCGCGTGACGTACTGGGATAAGC
ATACGGCGGTCAAGGCAGCGAAGGAACAGGAGATGAAGAAGGAAGCCGAA
ACGGTGTGAGGGGAGGAGAGGGGAGAAAGAGACGGAAGTTGTAAAAGGTG
TAGAGAGAAGAGGAGAGGAAGAAAAGAAGGATTCCGAAAAGGTGTAGGAG
GGCGATGACCAGCATCAAACAATGCATGTGCGAAGAAATGGGTAAATTTT
TAAAAATAGGTCGGAGTCGGTGAGTTGTTACAAAAGCGACAAGAGAGCGA
AGCTAAGAGGGAAGGAAAAGGAATAATAACACGAAGAAAAAGAAGAGCAG
AATGACCTCAGAGGCCACTTACA
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protein sequence of NO01G00630.1

>NO01G00630.1-protein ID=NO01G00630.1-protein|Name=NO01G00630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=287bp
MPTPRMVREPSDGRLTHQGAAFLFLITTTMAAAGGAALVLLLQHRGTLPP
PPRRQAPRSPSKGKEVHAAHVGSPSKSNSNRDTMPVEGSEDIFPPLPPTV
VALLHSTRVCHLSTTSSDGLPHLSLMRFTYRQEEEVIIMTTRTDTKKYEL
LCSSPKVAVLVHDFPSLRKEEEEEEEEVGGSKGGGEGGSTVQDVDDGAGE
GHTYAITLNGVAHVQKGEEAERFRALHLVNNIAYRQFIEGEKIAVFTVHV
MSARICNVKDRVTYWDKHTAVKAAKEQEMKKEAETV*
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Synonyms
Publications