NO01G00610, NO01G00610 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00610 vs. NCBI_GenBank
Match: EWM28987.1 (hypothetical protein Naga_100501g4 [Nannochloropsis gaditana]) HSP 1 Score: 251.5 bits (641), Expect = 2.100e-63 Identity = 144/191 (75.39%), Postives = 159/191 (83.25%), Query Frame = 0 Query: 2 KLLLPVLVIFALASTSTAFLLPSCPIPSTFSWSSSSSNTRLGASIYDDINAAMKQAMKDKAKEKLSALRNIKSAFGTALKEEGAAESLPDEKAIAILTKLRKQRLESIEMFQKGNRDDMVQAEQAELAILEAYLPQLADEATTREWVAAAIDESGAKAKSDMGKVMGVMMKKHKGKTDNKLVSKLVGEMLG 193 K L + +I A +T +AFLL P+T +TRL ASIY+D+N A+KQAMKDK KEKLSALRNIKSA G ALKEEGAAE+LPDEKAI ILTKLRKQR ESIEMF KGNRDDMVQAE+AELAILE YLPQLADEATTREWV+AAI E+GA AKSDMGKVMGVMMK++KGKTDNKLVSKLVGEMLG Sbjct: 7 KSWLSIALILACMTTPSAFLLAP---PTTHLVKHYQGSTRLSASIYEDVNTAVKQAMKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEMLG 194
BLAST of NO01G00610 vs. NCBI_GenBank
Match: XP_005855957.1 (hypothetical protein NGA_0547000 [Nannochloropsis gaditana CCMP526] >EKU20400.1 hypothetical protein NGA_0547000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 221.1 bits (562), Expect = 3.000e-54 Identity = 119/135 (88.15%), Postives = 126/135 (93.33%), Query Frame = 0 Query: 58 MKDKAKEKLSALRNIKSAFGTALKEEGAAESLPDEKAIAILTKLRKQRLESIEMFQKGNRDDMVQAEQAELAILEAYLPQLADEATTREWVAAAIDESGAKAKSDMGKVMGVMMKKHKGKTDNKLVSKLVGEMLG 193 MKDK KEKLSALRNIKSA G ALKEEGAAE+LPDEKAI ILTKLRKQR ESIEMF KGNRDDMVQAE+AELAILE YLPQLADEATTREWV+AAI E+GA AKSD+GKVMGVMMK++KGKTDNKLVSKLVGEMLG Sbjct: 1 MKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDVGKVMGVMMKRYKGKTDNKLVSKLVGEMLG 135
BLAST of NO01G00610 vs. NCBI_GenBank
Match: CBN73973.1 (GatB/YqeY [Ectocarpus siliculosus]) HSP 1 Score: 147.9 bits (372), Expect = 3.200e-32 Identity = 79/156 (50.64%), Postives = 107/156 (68.59%), Query Frame = 0 Query: 36 SSSNTRLGASIYDDINAAMKQAMKDKAKEKLSALRNIKSAFGTALKEEGAAESLPDEKAIAILTKLRKQRLESIEMFQKGNRDDMVQAEQAELAILEAYLPQLADEATTREWVAAAIDESGAKAKSDMGKVMGVMMKKHKGKTDNKLVSKLVGEML 192 S+S+T L ++DD+ A MK +MK K KL LR +++AF T K G+ + LPDEK IAIL K+ KQ+ ESI+M++KG RDD+V+ E +++A LPQLADEATT++WV AI +GAK SDMGKVMG++MK HK + D L +LV L Sbjct: 53 SASSTSLSMGVFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQL 208
BLAST of NO01G00610 vs. NCBI_GenBank
Match: OSX74155.1 (hypothetical protein BU14_0306s0033 [Porphyra umbilicalis]) HSP 1 Score: 124.8 bits (312), Expect = 2.900e-25 Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 0 Query: 46 IYDDINAAMKQAMKDKAKEKLSALRNIKSAFGTALKEEGAAESLPDEKAIAILTKLRKQRLESIEMFQKGNRDDMVQAEQAELAILEAYLPQLADEATTREWVAAAIDESGAKAKSDMGKVMGVMMKKHKGKTDNKLVSKLVGEML 192 I D+ MK AMK K + L LRN+++AF TA KE G A++L D A+A L +L KQR +SIEM++ G R D+ +AE+ EL++++ YLP ADEATTR WV AI GA D+GKVMG +MK H+ + D LV K+ E+L Sbjct: 3 IATDVTERMKVAMKAKDADTLRVLRNMRAAFLTAQKETG-ADTLDDAAAVACLKRLVKQRNQSIEMYETGGRTDLAEAEKFELSLIQTYLPSTADEATTRGWVEEAIAAIGATKPGDVGKVMGAVMKGHRSEVDGALVKKVAAELL 147
BLAST of NO01G00610 vs. NCBI_GenBank
Match: WP_069800227.1 (GatB/YqeY domain-containing protein [Tepidibacillus sp. HK-1] >GAU63984.1 glutamyl-tRNA(Gln) amidotransferase subunit E [Tepidibacillus sp. HK-1]) HSP 1 Score: 112.1 bits (279), Expect = 2.000e-21 Identity = 69/147 (46.94%), Postives = 94/147 (63.95%), Query Frame = 0 Query: 45 SIYDDINAAMKQAMKDKAKEKLSALRNIKSAFGTALKEEGAAESLPDEKAIAILTKLRKQRLESIEMFQKGNRDDMVQAEQAELAILEAYLPQLADEATTREWVAAAIDESGAKAKSDMGKVMGVMMKKHKGKTDNKLVSKLVGEML 192 S+ D I+ MKQAMK+K K KLS +R I+SA E +L DE+ + +LT+ KQR +S++ F+K R D+V+ QAEL IL+ YLPQ E R + + I+E GAK KSDMGKVM +M K KG+ D KL+++LV E L Sbjct: 2 SLMDRISEDMKQAMKNKDKVKLSVIRMIRSAI--KYTEIEKQTTLSDEQILDVLTREVKQRRDSLQEFEKAGRQDLVENVQAELEILKQYLPQQLSEQELRNIIQSVIEEIGAKGKSDMGKVMSAVMPKVKGRADGKLINQLVQEYL 146
BLAST of NO01G00610 vs. NCBI_GenBank
Match: WP_068723364.1 (GatB/YqeY domain-containing protein [Tepidibacillus decaturensis] >KXG43180.1 aspartyl-tRNA amidotransferase [Tepidibacillus decaturensis]) HSP 1 Score: 111.7 bits (278), Expect = 2.600e-21 Identity = 69/147 (46.94%), Postives = 94/147 (63.95%), Query Frame = 0 Query: 45 SIYDDINAAMKQAMKDKAKEKLSALRNIKSAFGTALKEEGAAESLPDEKAIAILTKLRKQRLESIEMFQKGNRDDMVQAEQAELAILEAYLPQLADEATTREWVAAAIDESGAKAKSDMGKVMGVMMKKHKGKTDNKLVSKLVGEML 192 S+ D I+ MKQAMK+K K KLS +R I+SA E +L DE+ + +LT+ KQR +S++ F+K R D+V+ QAEL IL+ YLPQ E R + + I+E GAK KSDMGKVM +M K KG+ D KL+++LV E L Sbjct: 2 SLMDRISEDMKQAMKNKDKLKLSVIRMIRSAI--KYTEIEKQTTLSDEQILDVLTREVKQRRDSLQEFEKAGRQDLVENVQAELEILKQYLPQQLSEQELRNIIQSVIEEIGAKGKSDMGKVMSAVMPKVKGRADGKLINQLVQEYL 146
BLAST of NO01G00610 vs. NCBI_GenBank
Match: WP_066396290.1 (GatB/YqeY domain-containing protein [Fictibacillus phosphorivorans] >ANC77921.1 hypothetical protein ABE65_014410 [Fictibacillus phosphorivorans]) HSP 1 Score: 111.7 bits (278), Expect = 2.600e-21 Identity = 63/147 (42.86%), Postives = 95/147 (64.63%), Query Frame = 0 Query: 45 SIYDDINAAMKQAMKDKAKEKLSALRNIKSAFGTALKEEGAAESLPDEKAIAILTKLRKQRLESIEMFQKGNRDDMVQAEQAELAILEAYLPQLADEATTREWVAAAIDESGAKAKSDMGKVMGVMMKKHKGKTDNKLVSKLVGEML 192 S+ +++N MKQAMKDK K+KLS +R +K++ ++G L +E+ + +L + KQR +S++ F+K RDD+V Q E+A+L YLP+ E +E VA I E GA +K+DMGKVMG +M K KGK D LV+++V + L Sbjct: 2 SLLNELNQDMKQAMKDKNKQKLSVIRMLKASLQNEAIKQG--RELNEEEELTVLVREMKQRKDSLQEFEKAGRDDLVAGLQDEIAVLTPYLPKQLSEEELQEIVAQTISEIGASSKADMGKVMGALMPKVKGKADGGLVNRIVQQQL 146
BLAST of NO01G00610 vs. NCBI_GenBank
Match: WP_101074393.1 (glutamyl-tRNA amidotransferase [Rhodohalobacter barkolensis] >PKD42698.1 glutamyl-tRNA amidotransferase [Rhodohalobacter barkolensis]) HSP 1 Score: 111.7 bits (278), Expect = 2.600e-21 Identity = 65/149 (43.62%), Postives = 94/149 (63.09%), Query Frame = 0 Query: 45 SIYDDINAAMKQAMKDKAKEKLSALRNIKSAF--GTALKEEGAAESLPDEKAIAILTKLRKQRLESIEMFQKGNRDDMVQAEQAELAILEAYLPQLADEATTREWVAAAIDESGAKAKSDMGKVMGVMMKKHKGKTDNKLVSKLVGEML 192 SI + I +K AMK K ++L LR++K+ + +G + DE+A+ +L K KQR ESI+ F+KG R D+V+ E+ EL I+E+YLP++ D+ RE V ID+ GA + +DMG+VMGVMM K KGK D VS++V E L Sbjct: 2 SIKEKILNDLKAAMKAKEADRLRVLRSLKAKILEKEISERKGGEAEITDEQAVEVLMKAAKQRKESIDQFEKGGRTDLVEKEEEELKIIESYLPEMMDDDAIREAVKQQIDQMGASSMADMGQVMGVMMSKLKGKADGSAVSRIVKEEL 150
BLAST of NO01G00610 vs. NCBI_GenBank
Match: WP_007504949.1 (GatB/YqeY domain-containing protein [Caldalkalibacillus thermarum] >EGL82662.1 hypothetical protein CathTA2_1818 [Caldalkalibacillus thermarum TA2.A1]) HSP 1 Score: 110.9 bits (276), Expect = 4.400e-21 Identity = 64/147 (43.54%), Postives = 93/147 (63.27%), Query Frame = 0 Query: 45 SIYDDINAAMKQAMKDKAKEKLSALRNIKSAFGTALKEEGAAESLPDEKAIAILTKLRKQRLESIEMFQKGNRDDMVQAEQAELAILEAYLPQLADEATTREWVAAAIDESGAKAKSDMGKVMGVMMKKHKGKTDNKLVSKLVGEML 192 S+ D +N MKQAMK+K K +LS +R +K+A +E +L D+ + +L++ KQR ES++ F+K RDD+V+ E+A+LE YLP+ E R+ V+ I E GA +K+DMGKVM +M K KGK D LV++LV E L Sbjct: 2 SLVDQLNNDMKQAMKNKEKTRLSVIRMVKAALKN--EEIKLGRALTDDDVLTVLSREMKQRKESLQEFEKAGRDDLVETLNQEIAVLETYLPEQLSEDELRQLVSDTIAEVGATSKADMGKVMSAIMPKVKGKADGSLVNRLVQEAL 146
BLAST of NO01G00610 vs. NCBI_GenBank
Match: WP_084373109.1 (GatB/YqeY domain-containing protein [Reichenbachiella faecimaris] >SMD35351.1 hypothetical protein SAMN04488029_2465 [Reichenbachiella faecimaris]) HSP 1 Score: 110.9 bits (276), Expect = 4.400e-21 Identity = 64/147 (43.54%), Postives = 91/147 (61.90%), Query Frame = 0 Query: 45 SIYDDINAAMKQAMKDKAKEKLSALRNIKSAFGTALKEEGAAESLPDEKAIAILTKLRKQRLESIEMFQKGNRDDMVQAEQAELAILEAYLPQLADEATTREWVAAAIDESGAKAKSDMGKVMGVMMKKHKGKTDNKLVSKLVGEML 192 S+ D INA +K AM K KEKL+ALR+IKS A E+GA+E + ++ + +L K KQR +S+++F++ RDD+ EQ ELAI+ YLP+ E + + ID++GA DMGKVMG+ K GK D K +S LV +L Sbjct: 2 SLKDQINADIKAAMLAKEKEKLTALRSIKSMILLAETEKGASEGISEDAEMKLLMKAAKQRKDSVDLFREQGRDDLADKEQGELAIINQYLPKQLSEEELKAELQKVIDQAGASGPQDMGKVMGMATKALAGKADGKTISALVKTLL 148 The following BLAST results are available for this feature:
BLAST of NO01G00610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00610 ID=NO01G00610|Name=NO01G00610|organism=Nannochloropsis oceanica|type=gene|length=579bpback to top protein sequence of NO01G00610.1 >NO01G00610.1-protein ID=NO01G00610.1-protein|Name=NO01G00610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bpback to top Synonyms
Publications
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