NO01G00580, NO01G00580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00580 vs. NCBI_GenBank
Match: GAX11188.1 (hypothetical protein FisN_9Hh284 [Fistulifera solaris]) HSP 1 Score: 124.0 bits (310), Expect = 6.200e-25 Identity = 72/199 (36.18%), Postives = 114/199 (57.29%), Query Frame = 0 Query: 19 SLFLLPALLLSASTDK--PQGHTGIVKPFKPGP-PGIKLKSGEIEKLRKGEAV-KQQLSSGSGGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVM-GFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVL 213 SL + A + A D+ P HTG + P+ PGP P ++L S + +L +G+ V KQ G+ G + +QD+ AP VW +I+D YT+ V +V NY V ++ + K+I T+M L V+ G++ E + H +YP +++ WTLDY + SD+DD G+WH+ + D +RV+Y+ D+ LK +P V N L Sbjct: 7 SLIAIIATICEAKIDRNQPHDHTGKLTPYSPGPFPNLELTSKDEAELAQGKPVMKQSQGDGNSGGAICVQDIDAPKAAVWNQILDLGMYTKKVGKVIHSSNYHVDKS-DENAKKIKTKMVLGVIPGYSYESYYDHTFYPHQDSMTWTLDYEKTSDMDDVSGHWHL---EERDGGLKTRVFYACDISLKGSVPGPVLNYL 201
BLAST of NO01G00580 vs. NCBI_GenBank
Match: GAX26978.1 (hypothetical protein FisN_9Lh284 [Fistulifera solaris]) HSP 1 Score: 123.6 bits (309), Expect = 8.100e-25 Identity = 71/200 (35.50%), Postives = 115/200 (57.50%), Query Frame = 0 Query: 18 VSLFLLPALLLSASTDK--PQGHTGIVKPFKPGP-PGIKLKSGEIEKLRKGEAV-KQQLSSGSGGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVM-GFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVL 213 ++L A + A D+ P HTG + P+ PGP P ++L S + +L +G+ V KQ G+ G + +QD++AP VW +I+D YT+ V +V NY V ++ + K+I T+M L V+ G++ E + H +YP +++ WTLDY + SD+DD G+WH+ + D +RV+Y+ D+ LK +P V N L Sbjct: 6 LALIAFVATICEAKIDRNQPHDHTGKLTPYSPGPFPNLELTSKDEAELAQGKPVMKQSQGDGNSGGAICVQDINAPKAAVWNQILDLGMYTKKVGKVIHSSNYHVDKS-DENAKKIKTKMVLGVIPGYSYESYYDHTFYPHQDSMTWTLDYEKTSDMDDVSGHWHL---EERDGGLKTRVFYACDISLKGSVPGPVLNYL 201
BLAST of NO01G00580 vs. NCBI_GenBank
Match: KOO24116.1 (hypothetical protein Ctob_004915 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 122.1 bits (305), Expect = 2.300e-24 Identity = 64/177 (36.16%), Postives = 99/177 (55.93%), Query Frame = 0 Query: 38 HTGIVKPFKPGPPGIKLKSGEIEKLRKGEAVKQQL--SSGSGGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVMGFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVL 213 H G + P++ GPP I L G+ ++L GEA+ Q + G R ++++DV APP V+ +I+D AY MV V Y + E+ GL+ I TR ++ + Y++ H Y P + + LDY+R SDLDD+VGYW+V P + RVYYS +L+ W+P V +++ Sbjct: 5 HRGKLPPYEIGPPSILLSHGDEQRLLAGEALMQAIVQEDGVARRLIMVKDVRAPPSVITRKILDIDAYPAMVKGVDSTATYSMSEDASTGLRTIKTRYDISALHVKFTYYLEHIYSPADRCMTFRLDYDRRSDLDDTVGYWYVQPRGPEE----CRVYYSCVTQLRGWVPGPVYSLI 177
BLAST of NO01G00580 vs. NCBI_GenBank
Match: XP_009037686.1 (hypothetical protein AURANDRAFT_64787 [Aureococcus anophagefferens] >EGB07695.1 hypothetical protein AURANDRAFT_64787 [Aureococcus anophagefferens]) HSP 1 Score: 113.2 bits (282), Expect = 1.100e-21 Identity = 62/193 (32.12%), Postives = 104/193 (53.89%), Query Frame = 0 Query: 34 KPQGHTGIVKPF---KPGPPGIKLKSGEIEKLRKGEAVKQQLSSGSG-GRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVMGFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQVGQPALT 223 +P HTGI+K + P G+ LK +LR G + + +G R + IQD+ APP+VV+GRI D+P Y RM+ V CE Y+ + + G + + + V +++++ H Y P + + ++LDY R+SD+ D VGYW+ + W+R+YYS D ++ W+P F K + + ++T Sbjct: 27 EPHPHTGILKQYDRRHPSKYGVTLKGITEAQLRSGTPALKLIPQANGFKRTIGIQDIEAPPDVVFGRICDWPNYHRMIKDVKRCEVYR-RGWTLSGCRVACAKYEIAVPMTKLDFYVEHVYDPLNHAMSFSLDYTRKSDVADQVGYWYC----EKLAGGWTRLYYSTDFQIPRWVPPFAKGFILKLAAKSSVT 214
BLAST of NO01G00580 vs. NCBI_GenBank
Match: OLP88262.1 (hypothetical protein AK812_SmicGene30415 [Symbiodinium microadriaticum]) HSP 1 Score: 110.5 bits (275), Expect = 7.100e-21 Identity = 75/213 (35.21%), Postives = 118/213 (55.40%), Query Frame = 0 Query: 8 LRSFSLLLTLVSLFLLPALLLSASTDKP-QGHTGIVKPFKPGP-PGIK-LKSGEIEKLRKGEAVKQQLSSGSGGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKV--QENYMQGLKEIYTRMRLTVM-GFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKN 215 L + +LLL LV P ++ P QGH G + FK GP +K L S E + L +G+ V +Q + G+GL I+D+ A P+ V ++DF Y + +V++C + V ++ G ++I M T++ GF+ + H K ++++W+LDY+R SD+DD G W+V PH P +E WSRVYY IDMRL+ +P + L + Sbjct: 19 LAAAALLLPLVLKTSEPEVVDEEGKGGPAQGHRGTLPTFKLGPVENLKPLTSSEEKTLEQGKLVLRQEEDPTRGKGLAIRDMAATPDDVMEELLDFSTYKK---KVAMCSSSIVYGRKKLRGGKEQIKVEMSSTIIPGFSFHCYFDHTADRKGHSMIWSLDYDRRSDVDDIKGMWYVEPH--PTKEGWSRVYYQIDMRLRYKIPGVLYRALSS 226
BLAST of NO01G00580 vs. NCBI_GenBank
Match: GAX14219.1 (hypothetical protein FisN_20Hu157 [Fistulifera solaris]) HSP 1 Score: 105.9 bits (263), Expect = 1.700e-19 Identity = 65/201 (32.34%), Postives = 113/201 (56.22%), Query Frame = 0 Query: 8 LRSFSLLLTLVSLFLLPALLLSASTDKPQGHTGIVKPFKPGP-PGIKLKSGEIEKLRKGEAVKQQLSSGSGGRGLV-IQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVM-GFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMP 206 ++S L ++ + A S +P HTG + P+ P P IKL + +L +G+ V +Q+ G G+V IQD+HAP VW +I+DF Y + V V NY V ++ + K I T+++L ++ G++ + + H +YP+ +++ WTLDY+R+SD+DD G WH+ + D +RV+ + D+ L+ ++P Sbjct: 1 MKSKITLALVIITVAITACEASVDRIQPHDHTGKLAPYFPRPFSEIKLTPQDEAQLARGKPVLKQIE----GEGVVCIQDIHAPKAAVWNQILDFGMYKKKVNLVLHSSNYYVDKSNEEA-KRIKTKVKLGILPGYSYDLYYDHIFYPQKDSMTWTLDYSRKSDMDDVSGQWHI---EERDNGSKTRVFCACDVLLREFVP 193
BLAST of NO01G00580 vs. NCBI_GenBank
Match: OEU08778.1 (hypothetical protein FRACYDRAFT_271578 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 105.5 bits (262), Expect = 2.300e-19 Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 0 Query: 77 GGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVM-GFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKN 211 GG + +QDV AP + VW +I+D +Y VP+VS CENY +EN G + T+M + V+ G+ F H Y P +++ W LDY+++SD DD G+WH+ H P + +RV+Y+ D++LK +P V N Sbjct: 12 GGGAICVQDVAAPKQAVWSQILDLNSYKGKVPKVSECENYFEKEN-EDGTCTMKTKMGVKVIPGYGYTSFYDHTYSPAKDSVTWRLDYDKKSDFDDVSGHWHLEDH--PTKPDCTRVFYACDIKLKGSVPGPVVN 143
BLAST of NO01G00580 vs. NCBI_GenBank
Match: XP_009034838.1 (hypothetical protein AURANDRAFT_62484 [Aureococcus anophagefferens] >EGB09991.1 hypothetical protein AURANDRAFT_62484 [Aureococcus anophagefferens]) HSP 1 Score: 95.5 bits (236), Expect = 2.300e-16 Identity = 66/186 (35.48%), Postives = 93/186 (50.00%), Query Frame = 0 Query: 42 VKPF-KPGPP-GIKLKSGEIEKLRKGEAV--KQQLSSGSGGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLT--VMGFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQVGQPAL 222 V PF KPG KL + +L G+ V + ++ GGRG + DV APP+ W I+ F Y + + S Y+ ++N M + I M+L V FN F H Y P +T+ WTLD +++SD D G W V H P +++WSRV+YS D+ L W+P V L G AL Sbjct: 236 VAPFTKPGDGWPSKLSKTHLAQLDDGKKVLLAGREANAGGGRGTAVCDVAAPPDSCWQAILGFERYAGRLAQCSSSSVYERKKNVMARSETIKVHMKLAGGVKTFNC--FYDHTYRPDKHTVTWTLDPDKKSDFLDVQGQWCVYKH--PTKKNWSRVWYSADVVLPPWLPRVVVVQLCKTSGTKAL 417
BLAST of NO01G00580 vs. NCBI_GenBank
Match: KOO26999.1 (pf04286 domain protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 93.2 bits (230), Expect = 1.200e-15 Identity = 53/144 (36.81%), Postives = 73/144 (50.69%), Query Frame = 0 Query: 53 KLKSGEIEKLRKGEAVKQQLSSGSGGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVMGFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSI 197 +L S E E++ G R +++QD+ P VV GRIMD AY MV V C Y G+K + + ++ MG +YF+ H Y PK +V+ LDY + SDLDD+VGYW+V D RVYYS+ Sbjct: 463 RLTSAEFERVLHPVFEALVAEDGLTRRLIMVQDIPVPSSVVLGRIMDLDAYDHMVSGVDSCVTY-ASNGESGGVKSVKSAYEISAMGMKFKYFVEHLYDPKAQCMVFRLDYGKRSDLDDTVGYWYV----DNRGRTSCRVYYSL 601
BLAST of NO01G00580 vs. NCBI_GenBank
Match: XP_005770561.1 (hypothetical protein EMIHUDRAFT_420385 [Emiliania huxleyi CCMP1516] >EOD18132.1 hypothetical protein EMIHUDRAFT_420385 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 91.7 bits (226), Expect = 3.400e-15 Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 0 Query: 98 MDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVMGFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQ 216 MD Y +MV + C Y+ ++ + G ++++ + R+ F++EYFI H Y P N + + LDY R S+ D+VGYW+V + + WSRVYYS D +L SW+P F ++ L Q Sbjct: 1 MDLDNYPKMVEGCTKCAVYR-KKRSLSGKQQVWAKYRICAGPFSMEYFIEHTYEPSKNCMTFHLDYERLSEFSDTVGYWYV----ERVEDGWSRVYYSADSQLPSWVPGFARDKLIQQ 113 The following BLAST results are available for this feature:
BLAST of NO01G00580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00580 ID=NO01G00580|Name=NO01G00580|organism=Nannochloropsis oceanica|type=gene|length=5694bpback to top protein sequence of NO01G00580.5 >NO01G00580.5-protein ID=NO01G00580.5-protein|Name=NO01G00580.5|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top protein sequence of NO01G00580.4 >NO01G00580.4-protein ID=NO01G00580.4-protein|Name=NO01G00580.4|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top protein sequence of NO01G00580.3 >NO01G00580.3-protein ID=NO01G00580.3-protein|Name=NO01G00580.3|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top protein sequence of NO01G00580.2 >NO01G00580.2-protein ID=NO01G00580.2-protein|Name=NO01G00580.2|organism=Nannochloropsis oceanica|type=polypeptide|length=298bpback to top protein sequence of NO01G00580.1 >NO01G00580.1-protein ID=NO01G00580.1-protein|Name=NO01G00580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top Synonyms
Publications
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