NO01G00580, NO01G00580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00580 vs. NCBI_GenBank
Match: EWM28988.1 (Polyketide cyclase/dehydrase [Nannochloropsis gaditana]) HSP 1 Score: 385.6 bits (989), Expect = 1.100e-103 Identity = 182/215 (84.65%), Postives = 195/215 (90.70%), Query Frame = 0 Query: 4 AQRSLRSFSLLLTLVSLFLLPALLLSASTDKPQGHTGIVKPFKPGPPGIKLKSGEIEKLRKGEAVKQQLSSGSGGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVMGFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQVGQ 219 A R S ++L LP +LL ASTDKPQGH G+VKPFKPGPP I+LK E+EKLRKGEAVKQQLSSGSGGRGLVIQDV APPEVVWGRIMDFPAYTRMVPRVSLCENY+VQENY+QGLKEI+TRMRLTVMGFNVEYFIHHKY+PK+NT+VWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQVG+ Sbjct: 3 APRPSLSVAVLXXXXXXXXLPTVLLGASTDKPQGHNGLVKPFKPGPPSIRLKKSEVEKLRKGEAVKQQLSSGSGGRGLVIQDVEAPPEVVWGRIMDFPAYTRMVPRVSLCENYRVQENYLQGLKEIFTRMRLTVMGFNVEYFIHHKYFPKLNTVVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQVGR 217
BLAST of NO01G00580 vs. NCBI_GenBank
Match: EWM28717.1 (polyketide cyclase/dehydrase [Nannochloropsis gaditana]) HSP 1 Score: 176.4 bits (446), Expect = 1.000e-40 Identity = 85/207 (41.06%), Postives = 133/207 (64.25%), Query Frame = 0 Query: 12 SLLLTLVSLFLLPALLLSASTDKPQGHTGIVKPFKPGPPGIKLKSGEIEKLRKGEAVKQQLSSG--SGGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVMGFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIP-HPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQ 216 +L+ L+ + + P +A+ P H G+++ ++ P + L +E+L +G VK+Q+ + +GGRG+V+QDVHAP VV GRI+DF Y +MVP V+ C NY + M G E+ TR L+++GF +EYF+ H Y P + T+ WTLDY+R+SDL+D+ GYW V+P + + WSRV+YS+D+R+ +W+P V N+L Q Sbjct: 8 ALISALLGIIVHPFPGEAANPKLPHTHRGMLEKYELKVPRLALDMAAVERLERGYPVKKQIQAAGRAGGRGIVVQDVHAPASVVMGRILDFDNYNKMVPNVAQCGNY-AKRKLMHGDVELRTRYVLSIVGFKLEYFVRHLYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGNARDWSRVFYSVDLRIPAWVPQLVVNILNTQ 213
BLAST of NO01G00580 vs. NCBI_GenBank
Match: CBN75295.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 175.3 bits (443), Expect = 2.300e-40 Identity = 86/210 (40.95%), Postives = 123/210 (58.57%), Query Frame = 0 Query: 20 LFLLPALLLSASTDKPQGHTGIVKPFKPGPPGIKLKSGEIEKLRKGEAVKQQL------SSGSGGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVMGFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDRE-HWSRVYYSIDMRLKSWMPSFVKNVLKNQVGQPALT 223 + LP + ++ + H G VKP+KPG P I L + L G+ V+ L G GGR L +QDV+AP E VW RI+DF Y +MVP+V+ C+NY+ E G + I T ++L V G + F +H Y+P +++ WTLDY ++S LDDSVG+WHV HP D++ WSRVYYS+ +R+ SW+P V L + + A T Sbjct: 31 MLFLPGVAQGSAAAEAHPHQGKVKPYKPGMPDIVLTKKQRTDLDGGDLVQDMLKGETDEDGGKGGRALAVQDVNAPAEYVWDRILDFGNYNKMVPKVTECKNYET-ETLRNGTEIIKTNLKLNVFGVKLNSFFYHTYFPSKSSMTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATT 239
BLAST of NO01G00580 vs. NCBI_GenBank
Match: XP_002289925.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93462.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 166.4 bits (420), Expect = 1.100e-37 Identity = 90/214 (42.06%), Postives = 135/214 (63.08%), Query Frame = 0 Query: 12 SLLLTLVSLFLLPALLLSAST-DKPQGHTGIVKPFKPGPPGIKLKSGEIEKLRKGEAVKQQLSSGS-GGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKV-------QENYMQGLKEIYTRMRLTVMGFNVEYFIHH-KYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQ 216 SLL ++++ LL +AS +KP HTG V+PF+PG P IKL S + L+ G+ + Q+ SGS GGRGLV+QDV AP +VW RI+D+ Y+ MVP+ +NYK+ N+++ KEIYTRM++ +E+F+ H Y ++ WTLDY +ESD DDS GYW ++PHP+ D E +R+YYS+ + + W+P FV + + ++ Sbjct: 6 SLLGCVLTIALLCTPYANASNFNKPHSHTGKVEPFQPGDPKIKLDSKAMSILKAGKPYQTQVQSGSAGGRGLVVQDVDAPTSIVWERILDYDNYSNMVPKTIESKNYKIVPHKPTKANNFLE--KEIYTRMKVGFPMLKLEFFVRHFLYIQHHKSLTWTLDYTKESDFDDSCGYWFILPHPN-DPEEKTRLYYSVQVGMFDWVPKFVVDFMSSK 216
BLAST of NO01G00580 vs. NCBI_GenBank
Match: EJK62537.1 (hypothetical protein THAOC_16847 [Thalassiosira oceanica]) HSP 1 Score: 166.0 bits (419), Expect = 1.400e-37 Identity = 89/217 (41.01%), Postives = 134/217 (61.75%), Query Frame = 0 Query: 12 SLLLTLVSLFLLPALLLSAST---DKPQGHTGIVKPFKPGPPGIKLKSGEIEKLRKGEAVKQQL--SSGSGGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKV-------QENYMQGLKEIYTRMRLTVMGFNVEYFIHH-KYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQ 216 SL T+ S FL+ L AS DKP H G + PF+PG P +KL LR G+ + Q+ S G+GGRGLV+QDV AP +VW RI+D+ Y MVP+ + +NYK+ N+++ KEIYTRM++ +E+F+ H Y N++ WTLDY++ESD DDS+GYW+++PHPD D + +R++YS+ + + W+P FV + + ++ Sbjct: 175 SLWNTMKSTFLVITLTGWASASNFDKPHAHKGKLVPFQPGDPKVKLDGKAKNILRSGKPYQTQVQTSDGAGGRGLVVQDVDAPTSIVWERILDYDNYANMVPKTAESKNYKIVPHKPTKANNFLE--KEIYTRMKVGFPMLKLEFFVRHFLYLQHHNSLTWTLDYSKESDFDDSMGYWYIVPHPD-DPDEKTRLFYSVGVSMFDWVPKFVVDFMSSK 388
BLAST of NO01G00580 vs. NCBI_GenBank
Match: XP_009033051.1 (hypothetical protein AURANDRAFT_61214 [Aureococcus anophagefferens] >EGB11942.1 hypothetical protein AURANDRAFT_61214 [Aureococcus anophagefferens]) HSP 1 Score: 144.8 bits (364), Expect = 3.400e-31 Identity = 72/202 (35.64%), Postives = 114/202 (56.44%), Query Frame = 0 Query: 25 ALLLSASTDKPQGHTGIVKPFKP----GPPGIKLKSGEIEKLRKGEAVKQQLSSGSGGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVMGFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQVGQPALT 223 A + KP H PF P PP LKS ++ KL GE + Q S + G G ++D+ APP+VVW +++ F Y VP+V C NY+V ++ + + + +++ V G ++EY++ H ++P+ N + WTLDY ++SD+DD G W V+PH P+R WSRV Y+ D++L+ P FV ++L + A T Sbjct: 13 AAVFGGDPTKPHFHGPTRTPFDPKDDIAPP---LKSADLAKLADGEIITVQSSDATSGGGCAVEDIRAPPDVVWSQLLTFETYPDKVPKVRECANYEVTKSSDEEVMKTRYGVKV-VPGLSMEYYLRHVFHPRKNALTWTLDYEKQSDIDDCHGIWRVVPH--PERPEWSRVEYAADLKLRGGCPQFVIDILTKKALVDACT 208
BLAST of NO01G00580 vs. NCBI_GenBank
Match: XP_002178888.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49586.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 139.8 bits (351), Expect = 1.100e-29 Identity = 78/210 (37.14%), Postives = 125/210 (59.52%), Query Frame = 0 Query: 18 VSLFLLPALLLSASTDK--PQGHTGIVKPFKPGPPGIKLKSGEIEKLRKGEAVKQQLSSGSG---GRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVM-GFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQVGQPAL 222 +S +LL AL + ++ P H+G++K +PGP I L + + +L +G +V +Q +G G L +QD+ AP VW +I+D AY VP+VS C+NY Q+N+ G + TRM L VM G++ E + +H+Y P+ +++VW+LDY + SD DD G+WHV H P + +RV+YS D+++K +P + N +G+ AL Sbjct: 11 LSFWLLCALATAKKPNRNAPHAHSGLLKAHQPGPFPIVLSNADEAELNRGNSVMKQTMPAAGEEAGTVLCVQDIDAPMPAVWNQILDLGAYKGKVPKVSACDNYICQKNH-DGTFTVKTRMVLGVMPGYSYENYYNHRYLPEDSSMVWSLDYEKTSDFDDVAGHWHVAEH--PSKPSHTRVFYSCDVQMKGNLP----KPIINYIGKAAL 213
BLAST of NO01G00580 vs. NCBI_GenBank
Match: OGQ11771.1 (hypothetical protein A2138_20165 [Deltaproteobacteria bacterium RBG_16_71_12]) HSP 1 Score: 139.4 bits (350), Expect = 1.400e-29 Identity = 78/202 (38.61%), Postives = 112/202 (55.45%), Query Frame = 0 Query: 12 SLLLTLVSLFLLPALLLSASTDKPQGHTGIVKPFKPGPPGIKLKSGEIEKLRKGEAVKQQLSSGSGGRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVMGFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHP-DPDREHWSRVYYSIDMRLKSWMPSFVKNVL 213 SLL L++ L+A +KP GH G++KP+ PP + L E L +G++V +QL +GGRG+ I V A P+ VW I DF +Y + + V CE YK +I ++ ++YFI H Y WTLDYNR+SDLDDSVG+W V P+ DP R S V YS+D+++K W+P F++ +L Sbjct: 21 SLLAALLASAGAAGPALAADVNKPHGHHGVLKPYARPPPPLVLTDKEKATLDQGKSVMRQLEGEAGGRGMAIFRVDAAPDTVWAIINDFHSYPKWIDEVKKCEIYKKDGG------KIDVAFKIASFPVTIDYFIAHDYDMVNRWGTWTLDYNRDSDLDDSVGFWRVTPYQGDPAR---SLVEYSVDIKIKGWVPDFIRGLL 213
BLAST of NO01G00580 vs. NCBI_GenBank
Match: XP_005790214.1 (hypothetical protein EMIHUDRAFT_440256, partial [Emiliania huxleyi CCMP1516] >EOD37785.1 hypothetical protein EMIHUDRAFT_440256, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 132.1 bits (331), Expect = 2.300e-27 Identity = 76/205 (37.07%), Postives = 114/205 (55.61%), Query Frame = 0 Query: 20 LFLLPALLLSASTDKPQGHTGIVKPFKPGPPGIKLKSGEIEKLRKGEAVKQQLSSGSGG--RGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVMGFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKNQVGQPALT 223 + L + +A+ ++P H G + ++ GPP + L + E+L G+ V Q + +G G R L++QD+ APP VV RIMD Y +MV V+ N + GL+ I T + V+ + YF+ H+Y P+ + + LDY+R SD+DDSVGYW+V P R SRVYYS + +L+ W+PS V NVL + A T Sbjct: 1 MLTLSLAVAAAAENEPHYHNGKLTRYEIGPPSVLLSRSDEERLSSGKPVMQAMETGIVGARRLLMVQDIAAPPNVVMDRIMDLAHYDKMVDGVT--RNVEYNREQEGGLQRIKTTYDIAVLHMKMRYFMEHEYDPEKRCMTFHLDYSRRSDIDDSVGYWYV--EPGAGRAS-SRVYYSCECKLRGWVPSPVYNVLTKEALSKATT 200
BLAST of NO01G00580 vs. NCBI_GenBank
Match: OUW47345.1 (hypothetical protein CBD47_04735 [Synechococcus sp. TMED187]) HSP 1 Score: 129.0 bits (323), Expect = 1.900e-26 Identity = 66/189 (34.92%), Postives = 110/189 (58.20%), Query Frame = 0 Query: 30 ASTDKPQGHTGIVKPFKPGPP---GIKLKSGEIEKLRKGEAVKQQLSSGSG-GRGLVIQDVHAPPEVVWGRIMDFPAYTRMVPRVSLCENYKVQENYMQGLKEIYTRMRLTVMGFNVEYFIHHKYYPKMNTIVWTLDYNRESDLDDSVGYWHVIPHPDPDREHWSRVYYSIDMRLKSWMPSFVKNVLKN 215 A ++P H G + ++ PP G+ + + +LR G+ + Q +S +G R IQDVHAP +VVW +I+D P Y + V V CE Y+ + + G++ ++ + ++ F +EYF+ H++ K N + + LDY R+S+L D+VGYW+V D W RV+YS D ++ +W+P F+K+ L N Sbjct: 45 ADPNRPHPHQGTLTKYERKPPSEYGLSVAGVDATRLRSGKPLLQLISLPNGFKRTASIQDVHAPADVVWSKILDLPNYDKYVDGVVSCEVYRREAS--GGVELVFAKYKIRAAAFTLEYFMQHEFERKANAMTFQLDYTRKSELADTVGYWYVEELDD----GWCRVFYSTDSQIPAWIPGFMKDALVN 227 The following BLAST results are available for this feature:
BLAST of NO01G00580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00580 ID=NO01G00580|Name=NO01G00580|organism=Nannochloropsis oceanica|type=gene|length=5694bpback to top protein sequence of NO01G00580.5 >NO01G00580.5-protein ID=NO01G00580.5-protein|Name=NO01G00580.5|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top protein sequence of NO01G00580.4 >NO01G00580.4-protein ID=NO01G00580.4-protein|Name=NO01G00580.4|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top protein sequence of NO01G00580.3 >NO01G00580.3-protein ID=NO01G00580.3-protein|Name=NO01G00580.3|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top protein sequence of NO01G00580.2 >NO01G00580.2-protein ID=NO01G00580.2-protein|Name=NO01G00580.2|organism=Nannochloropsis oceanica|type=polypeptide|length=298bpback to top protein sequence of NO01G00580.1 >NO01G00580.1-protein ID=NO01G00580.1-protein|Name=NO01G00580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top Synonyms
Publications
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