NO01G00540, NO01G00540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00540 vs. NCBI_GenBank
Match: EQM78501.1 (ATP-dependent protease [Stenotrophomonas maltophilia MF89] >CRD54687.1 ATP-dependent Hsl protease ATP-binding subunit HslU [Stenotrophomonas maltophilia]) HSP 1 Score: 345.5 bits (885), Expect = 2.800e-91 Identity = 219/492 (44.51%), Postives = 284/492 (57.72%), Query Frame = 0 Query: 50 PSPSGLSQAPERAADADTATIEQESGTQPGWRLFPEDIVAHLDKYIVSQRDAKKATAIAMRMRWRRNQLPDEIRAEVTPSNILMKGPTGTGKTEIARRLSTLAEAPFIKVEATRYTEVGFVGANTSDMIKGLMDNAVRLERELARKNVAADARAKAEMKVLDLL---KLGN--------TKSTTAQQQE---ELRTRLRNGDFDHHTRRLHRDRAR---------AGRAGRXXXXXXXXXXXGG----ERQVVSVKKALERFVEEFEEVLTNEEEVMARAKHKAENYGIVFIDEIDKLCGSXXXXXXXXXXXXXXXXXXKGEGVQRELLTLVEGCSVPTRYGTVRTDFMLFIASGAFHHKSPSDLLPELQGRFPVRVALQPLSKGDLIQILSAKKFNILEQTKQLLATEGVELEFTACGIEAMAGFAQQINRSQQDIGARRLNTVMHRVLEELSYMAPRRRGEKVVVDEAFVDGRLKEFDLTKGDNLSRYIL 515 P P G + IE S T + P +IV LD++IV Q DAK+A AIA+R RWRR QL E+R EV P NILM GPTG GKTEIARRL+TLA APF+KVEATR+TEVG+VG + +I+ L D AV+L RE A+ V A +AE ++LD L + G +AQ E + R LRNG+ D R + D A G GG ++ +++K A +EE L NE+++ A E +GIVFIDEIDK+ EGVQR+LL LVEG +V T+YGT++TD +LFIASGAFH PSDL+PELQGRFP+RV L LSKGD ++IL+ K + +Q + LLATEGV++ FTA IE +A A Q+N Q++IGARRL+TV+ R+L+ LSY AP R GE + +D A+VD L E L + +LSRYIL Sbjct: 7 PGPFGSGIVDNEFVSTSMSKIEVSSAT-----MTPREIVQELDRHIVGQHDAKRAVAIALRNRWRRMQLAPELRNEVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATRFTEVGYVGKDVEQIIRDLADTAVKLYREQAKVRVRTQAEERAEDRILDALLPRRSGGIGFDPEVARNEPSAQDNETRIKFRKMLRNGELDE--REIELDLAANVSMDIMTPPGMEEMGQQLKSMFANLGGGAKAHKRTLTIKAARPLLIEEEAGKLVNEDDIRTAAIEACEQHGIVFIDEIDKVA---------KRGDNVGGGDVSREGVQRDLLPLVEGSNVSTKYGTIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELGALSKGDFVRILTEPKAALTKQYEALLATEGVKVSFTADAIERLAEIAFQVNERQENIGARRLHTVLERLLDSLSYEAPDRDGETLAIDSAYVDAHLGE--LVQDPDLSRYIL 480
BLAST of NO01G00540 vs. NCBI_GenBank
Match: WP_072167201.1 (ATP-dependent protease ATPase subunit HslU [Stenotrophomonas maltophilia] >CRX67441.1 hslU [Stenotrophomonas maltophilia]) HSP 1 Score: 345.5 bits (885), Expect = 2.800e-91 Identity = 212/458 (46.29%), Postives = 275/458 (60.04%), Query Frame = 0 Query: 84 PEDIVAHLDKYIVSQRDAKKATAIAMRMRWRRNQLPDEIRAEVTPSNILMKGPTGTGKTEIARRLSTLAEAPFIKVEATRYTEVGFVGANTSDMIKGLMDNAVRLERELARKNVAADARAKAEMKVLDLL---KLGN--------TKSTTAQQQE---ELRTRLRNGDFDHHTRRLHRDRAR---------AGRAGRXXXXXXXXXXXGG----ERQVVSVKKALERFVEEFEEVLTNEEEVMARAKHKAENYGIVFIDEIDKLCGSXXXXXXXXXXXXXXXXXXKGEGVQRELLTLVEGCSVPTRYGTVRTDFMLFIASGAFHHKSPSDLLPELQGRFPVRVALQPLSKGDLIQILSAKKFNILEQTKQLLATEGVELEFTACGIEAMAGFAQQINRSQQDIGARRLNTVMHRVLEELSYMAPRRRGEKVVVDEAFVDGRLKEFDLTKGDNLSRYIL 515 P +IV LD++IV Q DAK+A AIA+R RWRR QL E+R EV P NILM GPTG GKTEIARRL+TLA APF+KVEATR+TEVG+VG + +I+ L D AV+L RE A+ V A +AE ++LD L + G +AQ E + R LRNG+ D R + D A G GG ++ +++K A +EE L NE+++ A E +GIVFIDEIDK+ EGVQR+LL LVEG +V T+YGT++TD +LFIASGAFH PSDL+PELQGRFP+RV L LSKGD ++IL+ K + +Q + LLATEGV++ FTA IE +A A Q+N Q++IGARRL+TV+ R+L+ LSY AP R GE + +D A+VD L E L + +LSRYIL Sbjct: 13 PREIVQELDRHIVGQHDAKRAVAIALRNRWRRMQLAPELRNEVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATRFTEVGYVGKDVEQIIRDLADTAVKLYREQAKVRVRTQAEERAEDRILDALLPRRSGGIGFDPEAARNEPSAQDNETRIKFRKMLRNGELD--AREIELDLAANVSMDIMTPPGMEEMGQQLKSMFANLGGGAKAHKRTLTIKAARPLLIEEEAGKLVNEDDIRTAAIEACEQHGIVFIDEIDKVA---------KRGDNVGGGDVSREGVQRDLLPLVEGSNVSTKYGTIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELGALSKGDFVRILTEPKAALTKQYEALLATEGVKVSFTADAIERLAEIAFQVNERQENIGARRLHTVLERLLDSLSYEAPDRDGETLAIDSAYVDAHLGE--LVQDPDLSRYIL 457
BLAST of NO01G00540 vs. NCBI_GenBank
Match: WP_070489736.1 (ATP-dependent protease ATPase subunit HslU [Stenotrophomonas sp. HMSC10F07] >OFU95520.1 ATP-dependent protease ATP-binding subunit HslU [Stenotrophomonas sp. HMSC10F07]) HSP 1 Score: 345.5 bits (885), Expect = 2.800e-91 Identity = 212/458 (46.29%), Postives = 275/458 (60.04%), Query Frame = 0 Query: 84 PEDIVAHLDKYIVSQRDAKKATAIAMRMRWRRNQLPDEIRAEVTPSNILMKGPTGTGKTEIARRLSTLAEAPFIKVEATRYTEVGFVGANTSDMIKGLMDNAVRLERELARKNVAADARAKAEMKVLDLL---KLGN--------TKSTTAQQQE---ELRTRLRNGDFDHHTRRLHRDRAR---------AGRAGRXXXXXXXXXXXGG----ERQVVSVKKALERFVEEFEEVLTNEEEVMARAKHKAENYGIVFIDEIDKLCGSXXXXXXXXXXXXXXXXXXKGEGVQRELLTLVEGCSVPTRYGTVRTDFMLFIASGAFHHKSPSDLLPELQGRFPVRVALQPLSKGDLIQILSAKKFNILEQTKQLLATEGVELEFTACGIEAMAGFAQQINRSQQDIGARRLNTVMHRVLEELSYMAPRRRGEKVVVDEAFVDGRLKEFDLTKGDNLSRYIL 515 P +IV LD++IV Q DAK+A AIA+R RWRR QLP E+R EV P NILM GPTG GKTEIARRL+TLA APF+KVEATR+TEVG+VG + +I+ L D AV+L RE A+ V A +AE ++LD L + G +AQ E + R LRNG+ D R + D A G GG ++ +++K A +EE L NE+++ A E +GIVFIDEIDK+ EGVQR+LL LVEG +V T+YGT++TD +LFIASGAFH PSDL+PELQGRFP+RV L LSK D ++IL+ K + +Q + LLATEGV++ FTA IE +A A Q+N Q++IGARRL+TV+ R+L+ LSY AP R GE + +D A+VD L E L + +LSRYIL Sbjct: 13 PREIVQELDRHIVGQHDAKRAVAIALRNRWRRMQLPAELRNEVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATRFTEVGYVGKDVEQIIRDLADTAVKLYREQAKVRVRTQAEERAEDRILDALLPRRSGGIGFDPEVARNEPSAQDNETRIKFRKMLRNGELDE--REIELDLAANVSMDIMTPPGMEEMGQQLKSMFANLGGGAKAHKRTLTIKAARPLLIEEEAGKLVNEDDIRTAAIEACEQHGIVFIDEIDKVA---------KRGDNVGGGDVSREGVQRDLLPLVEGSNVSTKYGTIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELGALSKNDFVRILTEPKAALTKQYEALLATEGVKVSFTADAIERLAEIAFQVNERQENIGARRLHTVLERLLDSLSYEAPDRDGETLAIDSAYVDAHLGE--LVQDPDLSRYIL 457
BLAST of NO01G00540 vs. NCBI_GenBank
Match: WP_074899829.1 (ATP-dependent protease ATPase subunit HslU [Stenotrophomonas maltophilia] >SFR86539.1 ATP-dependent HslUV protease ATP-binding subunit HslU [Stenotrophomonas maltophilia]) HSP 1 Score: 345.5 bits (885), Expect = 2.800e-91 Identity = 212/458 (46.29%), Postives = 275/458 (60.04%), Query Frame = 0 Query: 84 PEDIVAHLDKYIVSQRDAKKATAIAMRMRWRRNQLPDEIRAEVTPSNILMKGPTGTGKTEIARRLSTLAEAPFIKVEATRYTEVGFVGANTSDMIKGLMDNAVRLERELARKNVAADARAKAEMKVLDLL---KLGN--------TKSTTAQQQE---ELRTRLRNGDFDHHTRRLHRDRAR---------AGRAGRXXXXXXXXXXXGG----ERQVVSVKKALERFVEEFEEVLTNEEEVMARAKHKAENYGIVFIDEIDKLCGSXXXXXXXXXXXXXXXXXXKGEGVQRELLTLVEGCSVPTRYGTVRTDFMLFIASGAFHHKSPSDLLPELQGRFPVRVALQPLSKGDLIQILSAKKFNILEQTKQLLATEGVELEFTACGIEAMAGFAQQINRSQQDIGARRLNTVMHRVLEELSYMAPRRRGEKVVVDEAFVDGRLKEFDLTKGDNLSRYIL 515 P +IV LD++IV Q DAK+A AIA+R RWRR QLP E+R EV P NILM GPTG GKTEIARRL+TLA APF+KVEATR+TEVG+VG + +I+ L D AV+L RE A+ V A +AE ++LD L + G +AQ E + R LRNG+ D R + D A G GG ++ +++K A +EE L NE+++ A E +GIVFIDEIDK+ EGVQR+LL LVEG +V T+YGT++TD +LFIASGAFH PSDL+PELQGRFP+RV L LSKGD ++IL+ K + +Q + LLATEGV++ FT IE +A A Q+N Q++IGARRL+TV+ R+L+ LSY AP R GE + +D A+VD L E L + +LSRYIL Sbjct: 13 PREIVQELDRHIVGQHDAKRAVAIALRNRWRRMQLPAELRNEVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATRFTEVGYVGKDVEQIIRDLADTAVKLYREQAKVRVRTQAEERAEDRILDALLPRRSGGIGFDPEVARNEPSAQDNETRIKFRKMLRNGELDE--REIELDLAANVSMDIMTPPGMEEMGQQLKSMFANLGGGAKAHKRTLTIKAARPLLLEEEAGKLVNEDDIRTAAIEACEQHGIVFIDEIDKVA---------KRGDNVGGGDVSREGVQRDLLPLVEGSNVSTKYGTIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELGALSKGDFVRILTEPKAALTKQYEALLATEGVKVSFTGDAIERLAEIAFQVNERQENIGARRLHTVLERLLDSLSYEAPDRDGETLAIDSAYVDAHLGE--LVQDPDLSRYIL 457
BLAST of NO01G00540 vs. NCBI_GenBank
Match: WP_088496537.1 (ATP-dependent protease ATPase subunit HslU [Stenotrophomonas maltophilia] >OWQ76958.1 HslU--HslV peptidase ATPase subunit [Stenotrophomonas maltophilia] >PSD15353.1 ATP-dependent protease ATPase subunit HslU [Stenotrophomonas maltophilia] >PSD31155.1 ATP-dependent protease ATPase subunit HslU [Stenotrophomonas maltophilia]) HSP 1 Score: 345.5 bits (885), Expect = 2.800e-91 Identity = 212/458 (46.29%), Postives = 275/458 (60.04%), Query Frame = 0 Query: 84 PEDIVAHLDKYIVSQRDAKKATAIAMRMRWRRNQLPDEIRAEVTPSNILMKGPTGTGKTEIARRLSTLAEAPFIKVEATRYTEVGFVGANTSDMIKGLMDNAVRLERELARKNVAADARAKAEMKVLDLL---KLGN--------TKSTTAQQQE---ELRTRLRNGDFDHHTRRLHRDRAR---------AGRAGRXXXXXXXXXXXGG----ERQVVSVKKALERFVEEFEEVLTNEEEVMARAKHKAENYGIVFIDEIDKLCGSXXXXXXXXXXXXXXXXXXKGEGVQRELLTLVEGCSVPTRYGTVRTDFMLFIASGAFHHKSPSDLLPELQGRFPVRVALQPLSKGDLIQILSAKKFNILEQTKQLLATEGVELEFTACGIEAMAGFAQQINRSQQDIGARRLNTVMHRVLEELSYMAPRRRGEKVVVDEAFVDGRLKEFDLTKGDNLSRYIL 515 P +IV LD++IV Q DAK+A AIA+R RWRR QL E+R EV P NILM GPTG GKTEIARRL+TLA APF+KVEATR+TEVG+VG + +I+ L D AV+L RE A+ V A +AE ++LD L + G +AQ E + R LRNG+ D R + D A G GG ++ +++K A +EE L NE+++ A E +GIVFIDEIDK+ EGVQR+LL LVEG +V T+YGT++TD +LFIASGAFH PSDL+PELQGRFP+RV L LSKGD ++IL+ K + +Q + LLATEGV++ FTA IE +A A Q+N Q++IGARRL+TV+ R+L+ LSY AP R GE + +D A+VD L E L + +LSRYIL Sbjct: 13 PREIVQELDRHIVGQHDAKRAVAIALRNRWRRMQLAPELRNEVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATRFTEVGYVGKDVEQIIRDLADTAVKLYREQAKVRVRTQAEERAEDRILDALLPRRSGGIGFDPEVARNEPSAQDNETRIKFRKMLRNGELD--AREIELDLAANVSMDIMTPPGMEEMGQQLKSMFANLGGGAKAHKRTLTIKAARPLLIEEEAGKLVNEDDIRTAAIEACEQHGIVFIDEIDKVA---------KRGDNVGGGDVSREGVQRDLLPLVEGSNVSTKYGTIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELGALSKGDFVRILTEPKAALTKQYEALLATEGVKVSFTADAIERLAEIAFQVNERQENIGARRLHTVLERLLDSLSYEAPDRDGETLAIDSAYVDAHLGE--LVQDPDLSRYIL 457
BLAST of NO01G00540 vs. NCBI_GenBank
Match: WP_026347094.1 (ATP-dependent protease ATPase subunit HslU [Stenotrophomonas maltophilia] >CRR69360.1 Unfoldase HslU [Pseudomonas aeruginosa] >PSD19742.1 ATP-dependent protease ATPase subunit HslU [Stenotrophomonas maltophilia]) HSP 1 Score: 345.1 bits (884), Expect = 3.700e-91 Identity = 212/458 (46.29%), Postives = 275/458 (60.04%), Query Frame = 0 Query: 84 PEDIVAHLDKYIVSQRDAKKATAIAMRMRWRRNQLPDEIRAEVTPSNILMKGPTGTGKTEIARRLSTLAEAPFIKVEATRYTEVGFVGANTSDMIKGLMDNAVRLERELARKNVAADARAKAEMKVLDLL---KLGN--------TKSTTAQQQE---ELRTRLRNGDFDHHTRRLHRDRAR---------AGRAGRXXXXXXXXXXXGG----ERQVVSVKKALERFVEEFEEVLTNEEEVMARAKHKAENYGIVFIDEIDKLCGSXXXXXXXXXXXXXXXXXXKGEGVQRELLTLVEGCSVPTRYGTVRTDFMLFIASGAFHHKSPSDLLPELQGRFPVRVALQPLSKGDLIQILSAKKFNILEQTKQLLATEGVELEFTACGIEAMAGFAQQINRSQQDIGARRLNTVMHRVLEELSYMAPRRRGEKVVVDEAFVDGRLKEFDLTKGDNLSRYIL 515 P +IV LD++IV Q DAK+A AIA+R RWRR QL E+R EV P NILM GPTG GKTEIARRL+TLA APF+KVEATR+TEVG+VG + +I+ L D AV+L RE A+ V A +AE ++LD L + G +AQ E + R LRNG+ D R + D A G GG ++ +++K A +EE L NE+++ A E +GIVFIDEIDK+ EGVQR+LL LVEG +V T+YGT++TD +LFIASGAFH PSDL+PELQGRFP+RV L LSKGD ++IL+ K + +Q + LLATEGV++ FTA IE +A A Q+N Q++IGARRL+TV+ R+L+ LSY AP R GE + +D A+VD L E L + +LSRYIL Sbjct: 13 PREIVQELDRHIVGQHDAKRAVAIALRNRWRRMQLAPELRNEVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATRFTEVGYVGKDVEQIIRDLADTAVKLYREQAKVRVRTQAEERAEDRILDALLPRRSGGIGFDPEVARNEPSAQDNETRIKFRKMLRNGELDE--REIELDLAANVSMDIMTPPGMEEMGQQLKSMFANLGGGAKAHKRTLTIKAARPLLIEEEAGKLVNEDDIRTAAIEACEQHGIVFIDEIDKVA---------KRGDNVGGGDVSREGVQRDLLPLVEGSNVSTKYGTIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELGALSKGDFVRILTEPKAALTKQYEALLATEGVKVSFTADAIERLAEIAFQVNERQENIGARRLHTVLERLLDSLSYEAPDRDGETLAIDSAYVDAHLGE--LVQDPDLSRYIL 457
BLAST of NO01G00540 vs. NCBI_GenBank
Match: WP_053497547.1 (ATP-dependent protease ATPase subunit HslU [Stenotrophomonas maltophilia] >KOQ66760.1 ATP-dependent protease [Stenotrophomonas maltophilia]) HSP 1 Score: 345.1 bits (884), Expect = 3.700e-91 Identity = 212/458 (46.29%), Postives = 275/458 (60.04%), Query Frame = 0 Query: 84 PEDIVAHLDKYIVSQRDAKKATAIAMRMRWRRNQLPDEIRAEVTPSNILMKGPTGTGKTEIARRLSTLAEAPFIKVEATRYTEVGFVGANTSDMIKGLMDNAVRLERELARKNVAADARAKAEMKVLDLL---KLGN--------TKSTTAQQQE---ELRTRLRNGDFDHHTRRLHRDRAR---------AGRAGRXXXXXXXXXXXGG----ERQVVSVKKALERFVEEFEEVLTNEEEVMARAKHKAENYGIVFIDEIDKLCGSXXXXXXXXXXXXXXXXXXKGEGVQRELLTLVEGCSVPTRYGTVRTDFMLFIASGAFHHKSPSDLLPELQGRFPVRVALQPLSKGDLIQILSAKKFNILEQTKQLLATEGVELEFTACGIEAMAGFAQQINRSQQDIGARRLNTVMHRVLEELSYMAPRRRGEKVVVDEAFVDGRLKEFDLTKGDNLSRYIL 515 P +IV LD++IV Q DAK+A AIA+R RWRR QLP E+R EV P NILM GPTG GKTEIARRL+TLA APF+KVEATR+TEVG+VG + +I+ L D AV+L RE A+ V A +AE ++LD L + G +AQ E + R LRNG+ D R + D A G GG ++ +++K A +EE L NE+++ A E +GIVFIDEIDK+ EGVQR+LL LVEG +V T+YGT++TD +LFIASGAFH PSDL+PELQGRFP+RV L LSK D ++IL+ K + +Q + LLATEGV++ FTA IE +A A Q+N Q++IGARRL+TV+ R+L+ LSY AP R GE + +D A+VD L E L + +LSRYIL Sbjct: 13 PREIVQELDRHIVGQHDAKRAVAIALRNRWRRMQLPVELRNEVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATRFTEVGYVGKDVEQIIRDLADTAVKLYREQAKVRVRTQAEERAEDRILDALLPRRSGGIGFDPEVARNEPSAQDNETRIKFRKMLRNGELDE--REIELDLAANVSMDIMTPPGMEEMGQQLKSMFANLGGGAKAHKRTLTIKAARPLLIEEEAGKLVNEDDIRTAAIEACEQHGIVFIDEIDKVA---------KRGDNVGGGDVSREGVQRDLLPLVEGSNVSTKYGTIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELGALSKNDFVRILTEPKAALTKQYEALLATEGVKVSFTADAIERLAEIAFQVNERQENIGARRLHTVLERLLDSLSYEAPDRDGETLAIDSAYVDAHLGE--LVQDPDLSRYIL 457
BLAST of NO01G00540 vs. NCBI_GenBank
Match: WP_061479701.1 (ATP-dependent protease ATPase subunit HslU [Stenotrophomonas sp. DDT-1] >KXU95392.1 ATP-dependent protease [Stenotrophomonas sp. DDT-1]) HSP 1 Score: 345.1 bits (884), Expect = 3.700e-91 Identity = 212/458 (46.29%), Postives = 275/458 (60.04%), Query Frame = 0 Query: 84 PEDIVAHLDKYIVSQRDAKKATAIAMRMRWRRNQLPDEIRAEVTPSNILMKGPTGTGKTEIARRLSTLAEAPFIKVEATRYTEVGFVGANTSDMIKGLMDNAVRLERELARKNVAADARAKAEMKVLDLL---KLGN--------TKSTTAQQQE---ELRTRLRNGDFDHHTRRLHRDRAR---------AGRAGRXXXXXXXXXXXGG----ERQVVSVKKALERFVEEFEEVLTNEEEVMARAKHKAENYGIVFIDEIDKLCGSXXXXXXXXXXXXXXXXXXKGEGVQRELLTLVEGCSVPTRYGTVRTDFMLFIASGAFHHKSPSDLLPELQGRFPVRVALQPLSKGDLIQILSAKKFNILEQTKQLLATEGVELEFTACGIEAMAGFAQQINRSQQDIGARRLNTVMHRVLEELSYMAPRRRGEKVVVDEAFVDGRLKEFDLTKGDNLSRYIL 515 P +IV LD++IV Q DAK+A AIA+R RWRR QL E+R EV P NILM GPTG GKTEIARRL+TLA APF+KVEATR+TEVG+VG + +I+ L D AV+L RE A+ V A +AE ++LD L + G +AQ E + R LRNG+ D R + D A G GG ++ +++K A +EE L NE+++ A E +GIVFIDEIDK+ EGVQR+LL LVEG +V T+YGT++TD +LFIASGAFH PSDL+PELQGRFP+RV L LSKGD ++IL+ K + +Q + LLATEGV++ FTA IE +A A Q+N Q++IGARRL+TV+ R+L+ LSY AP R GE + +D A+VD L E L + +LSRYIL Sbjct: 13 PREIVQELDRHIVGQHDAKRAVAIALRNRWRRMQLAPELRNEVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATRFTEVGYVGKDVEQIIRDLADTAVKLYREQAKVRVRTQAEERAEDRILDALLPRRSGGIGFDPEAARNEPSAQDNETRIKFRKMLRNGELDE--REIELDLAANVSMDIMTPPGMEEMGQQLKSMFANLGGGAKAHKRTLTIKAARPLLIEEEAGKLVNEDDIRTAAIEACEQHGIVFIDEIDKVA---------KRGDNVGGGDVSREGVQRDLLPLVEGSNVSTKYGTIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELGALSKGDFVRILTEPKAALTKQYEALLATEGVKVSFTADAIERLAEIAFQVNERQENIGARRLHTVLERLLDSLSYEAPDRDGETLAIDSAYVDAHLGE--LVQDPDLSRYIL 457
BLAST of NO01G00540 vs. NCBI_GenBank
Match: WP_071305873.1 (ATP-dependent protease ATPase subunit HslU [Stenotrophomonas maltophilia]) HSP 1 Score: 345.1 bits (884), Expect = 3.700e-91 Identity = 213/458 (46.51%), Postives = 275/458 (60.04%), Query Frame = 0 Query: 84 PEDIVAHLDKYIVSQRDAKKATAIAMRMRWRRNQLPDEIRAEVTPSNILMKGPTGTGKTEIARRLSTLAEAPFIKVEATRYTEVGFVGANTSDMIKGLMDNAVRLERELARKNVAADARAKAEMKVLDLL---KLGN--------TKSTTAQQQE---ELRTRLRNGDFDHHTRRLHRDRAR---------AGRAGRXXXXXXXXXXXGG----ERQVVSVKKALERFVEEFEEVLTNEEEVMARAKHKAENYGIVFIDEIDKLCGSXXXXXXXXXXXXXXXXXXKGEGVQRELLTLVEGCSVPTRYGTVRTDFMLFIASGAFHHKSPSDLLPELQGRFPVRVALQPLSKGDLIQILSAKKFNILEQTKQLLATEGVELEFTACGIEAMAGFAQQINRSQQDIGARRLNTVMHRVLEELSYMAPRRRGEKVVVDEAFVDGRLKEFDLTKGDNLSRYIL 515 P +IV LD++IV Q DAK+A AIA+R RWRR QL E+R EV P NILM GPTG GKTEIARRL+TLA APF+KVEATR+TEVG+VG + +I+ L D AV+L RE A+ V A +AE ++LD L + G +AQ E + R LRNG+ D R + D A G GG ++ +++K A VEE L NE+++ A E +GIVFIDEIDK+ EGVQR+LL LVEG +V T+YGT++TD +LFIASGAFH PSDL+PELQGRFP+RV L LSKGD ++IL+ K + +Q + LLATEGV++ FTA IE +A A Q+N Q++IGARRL+TV+ R+L+ LSY AP R GE + +D A+VD L E L + +LSRYIL Sbjct: 13 PREIVQELDRHIVGQHDAKRAVAIALRNRWRRMQLVPELRNEVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATRFTEVGYVGKDVEQIIRDLADTAVKLYREQAKVRVRTQAEERAEDRILDALLPRRSGGIGFDPEVARNEPSAQDNETRIKFRKMLRNGELDE--REIELDLAANVSMDIMTPPGMEEMGQQLKSMFANLGGGAKAHKRTLTIKAARPLLVEEEAGKLVNEDDIRTAAIEACEQHGIVFIDEIDKVA---------KRGDNVGGGDVSREGVQRDLLPLVEGSNVSTKYGTIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELGALSKGDFVRILTEPKAALTKQYEALLATEGVKVSFTADAIERLAEIAFQVNERQENIGARRLHTVLERLLDSLSYEAPDRDGETLAIDSAYVDAHLGE--LVQDPDLSRYIL 457
BLAST of NO01G00540 vs. NCBI_GenBank
Match: WP_095378276.1 (ATP-dependent protease ATPase subunit HslU [Stenotrophomonas maltophilia] >PAM70275.1 HslU--HslV peptidase ATPase subunit [Stenotrophomonas maltophilia]) HSP 1 Score: 345.1 bits (884), Expect = 3.700e-91 Identity = 212/458 (46.29%), Postives = 275/458 (60.04%), Query Frame = 0 Query: 84 PEDIVAHLDKYIVSQRDAKKATAIAMRMRWRRNQLPDEIRAEVTPSNILMKGPTGTGKTEIARRLSTLAEAPFIKVEATRYTEVGFVGANTSDMIKGLMDNAVRLERELARKNVAADARAKAEMKVLDLL---KLGN--------TKSTTAQQQE---ELRTRLRNGDFDHHTRRLHRDRAR---------AGRAGRXXXXXXXXXXXGG----ERQVVSVKKALERFVEEFEEVLTNEEEVMARAKHKAENYGIVFIDEIDKLCGSXXXXXXXXXXXXXXXXXXKGEGVQRELLTLVEGCSVPTRYGTVRTDFMLFIASGAFHHKSPSDLLPELQGRFPVRVALQPLSKGDLIQILSAKKFNILEQTKQLLATEGVELEFTACGIEAMAGFAQQINRSQQDIGARRLNTVMHRVLEELSYMAPRRRGEKVVVDEAFVDGRLKEFDLTKGDNLSRYIL 515 P +IV LD++IV Q DAK+A AIA+R RWRR QL E+R EV P NILM GPTG GKTEIARRL+TLA APF+KVEATR+TEVG+VG + +I+ L D AV+L RE A+ V A +AE ++LD L + G +AQ E + R LRNG+ D R + D A G GG ++ +++K A +EE L NE+++ A E +GIVFIDEIDK+ EGVQR+LL LVEG +V T+YGT++TD +LFIASGAFH PSDL+PELQGRFP+RV L LSKGD ++IL+ K + +Q + LLATEGV++ FTA IE +A A Q+N Q++IGARRL+TV+ R+L+ LSY AP R GE + +D A+VD L E L + +LSRYIL Sbjct: 13 PREIVQELDRHIVGQHDAKRAVAIALRNRWRRMQLAPELRNEVMPKNILMIGPTGVGKTEIARRLATLANAPFVKVEATRFTEVGYVGKDVEQIIRDLADTAVKLYREQAKVRVRTQAEERAEDRILDALLPRRSGGIGFDPEVARNEPSAQDNETRIKFRKMLRNGELDE--REIELDLAANVSMDIMTPPGMEEMGQQLKSMFANLGGGAKAHKRTLTIKAARPLLIEEEAGKLVNEDDIRTAAIEACEQHGIVFIDEIDKVA---------KRGDNVGGGDVSREGVQRDLLPLVEGSNVSTKYGTIKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELGALSKGDFVRILTEPKAALTKQYEALLATEGVKVSFTADAIERLAEIAFQVNERQENIGARRLHTVLERLLDSLSYEAPDRDGETLAIDSAYVDAHLGE--LVQDPDLSRYIL 457 The following BLAST results are available for this feature:
BLAST of NO01G00540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00540 ID=NO01G00540|Name=NO01G00540|organism=Nannochloropsis oceanica|type=gene|length=2632bpback to top protein sequence of NO01G00540.1 >NO01G00540.1-protein ID=NO01G00540.1-protein|Name=NO01G00540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=515bpback to top Synonyms
Publications
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