NO01G00440, NO01G00440 (gene) Nannochloropsis oceanica

Overview
NameNO01G00440
Unique NameNO01G00440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3855
Alignment locationchr1:118479..122333 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlutamate-rich wd repeat containing 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:118479..122333 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR022052Histone-bd_RBBP4_N
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO01G00440 vs. NCBI_GenBank
Match: XP_002902551.1 (glutamate-rich WD repeat-containing protein [Phytophthora infestans T30-4] >EEY56477.1 glutamate-rich WD repeat-containing protein [Phytophthora infestans T30-4])

HSP 1 Score: 351.3 bits (900), Expect = 5.400e-93
Identity = 239/432 (55.32%), Postives = 301/432 (69.68%), Query Frame = 0
Query:  114 ATRAAPAVYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEA---KKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            A +    V++PG++  L + E L YD SAY MY+ +T EWP LS D+VRD LG  R+R+P+T++ V GTQA   + N++T+MK+S++HKT             XXXXXXXXXXXXXXXXX   DP+LE  SI H GGVNR+R MPQ S+IVATW+D   VHLWDIA  + ++D  ++A   A  ++P+ +++GH DEG+AMDWS V  GRLVTGD    I+LW   E G W++   K P+ GH SSVED        SVF S SSD+T+R+WD R K G ML V  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF    K   P+AHF +H  P+TSI WHP DES+LA +  D+ +S+WD+SVEED + A   +  +      LPPQLLF+HQGQ +IKE+ FHPQ PG+LM+TA DGFNVF+PA
Sbjct:   74 AEKKVKKVFMPGVDK-LHDDEVLDYDSSAYDMYYAMTAEWPALSIDVVRDNLGAVRSRFPMTVFMVAGTQATNADDNQITVMKMSELHKT------------KXXXXXXXXXXXXXXXXXXXXDPVLESRSIPHPGGVNRIRCMPQSSNIVATWSDRKKVHLWDIAKQLESLDGKTSAPLPA-KQAPVYTFSGHADEGFAMDWSPVQAGRLVTGDCSKFIYLWANSE-GAWSV--DKVPFTGHKSSVEDXXXXXXXXSVFASCSSDRTVRIWDTRRKAGSMLDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----KADNPVAHFRYHTAPVTSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAVPIQGENGEAKLDLPPQLLFIHQGQTDIKELHFHPQCPGVLMSTAGDGFNVFKPA 484          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: OWZ02381.1 (Glutamate-rich WD repeat-containing protein [Phytophthora megakarya])

HSP 1 Score: 350.5 bits (898), Expect = 9.300e-93
Identity = 236/425 (55.53%), Postives = 297/425 (69.88%), Query Frame = 0
Query:  121 VYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEA---KKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            V++PG++  L + E L YD SAY MY+ +T EWP LS D+VRD LG  R+R+P+T++ V GTQA   + N++T+MK+S++HKT    KH          XXXXXXXXXXXXXX   DP+LE  SI H GG+NR+R MPQ S+IVATW+D   VHLWDIA  + ++D  + A   A  ++P+ +++GH DEG+AMDWS V  GRLVTGD    I+LW   E G W++   K P+ GH SSVED        SVF S SSD+T+R+WD R K G ML V  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF    K   P+AHF +H  P+TSI WHP DES+LA +  D+ +S+WD+SVEED + A   +  +      LPPQLLF+HQGQ +IKE+ FHPQ PG+LM+TA DGFNVF+PA
Sbjct:   73 VFMPGVDK-LQDDEVLDYDASAYDMYYAMTAEWPSLSIDVVRDNLGAVRSRFPMTVFMVAGTQATNADDNQITVMKMSELHKT----KH--------NDXXXXXXXXXXXXXXXXXDPVLESRSISHPGGINRIRCMPQSSNIVATWSDRKKVHLWDIAKQLESLDGKAGAPLPA-KQAPVYTFSGHADEGFAMDWSPVQAGRLVTGDCSKFIYLWANSE-GAWSV--DKVPFTGHKSSVEDXXXXXXXXSVFASCSSDRTVRIWDTRRKAGSMLDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----KADNPVAHFRYHTAPVTSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAVPVQGENGEAKLDLPPQLLFIHQGQTDIKELHFHPQCPGVLMSTAGDGFNVFKPA 476          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: XP_008617204.1 (hypothetical protein SDRG_12899 [Saprolegnia diclina VS20] >EQC29437.1 hypothetical protein SDRG_12899 [Saprolegnia diclina VS20])

HSP 1 Score: 343.2 bits (879), Expect = 1.500e-90
Identity = 243/423 (57.45%), Postives = 303/423 (71.63%), Query Frame = 0
Query:  121 VYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF-SPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEAKKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            V+LP  E  L E E L YD SAY +Y+ ++ EWP LSFDIVRD LG  RT++P+++Y V GTQA     NK+T+M          K    XXXXXXXXXXXXXXXXXXXXXXX    P+LE  SIDH GG+NR+RAMPQ S+IVATWADT  VHL+DI+  ++++D  +     +   +P+ ++ GH DEG+AMDWS  + G L+TGD    I+ W    A  W +   K P+ GH +S+EDLQWSP E SVF S S+DKT+R+WD+R K   M+ V AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  F SP+K +  PIAHF +H  P+TSI WHP DES+LA +  D+ +SIWD+SVEED ++   PS+  L  +PPQLLF+HQGQ +IKE+ FHPQ PGLL++TAADGFNVF+PA
Sbjct:   85 VWLPNKEK-LGEDEVLDYDSSAYDLYYAMSAEWPSLSFDIVRDNLGACRTKFPMSIYVVAGTQAAKASDNKITIM----------KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLESRSIDHHGGINRIRAMPQSSNIVATWADTRKVHLYDISKQLQSLDGKNPVGMSSTA-APVFTFTGHADEGFAMDWSPHTAGSLLTGDCSKYIYHWVNNGA-SWVV--DKIPFTGHKASIEDLQWSPLEGSVFASCSADKTVRIWDIRTKTRSMIEVNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKFGSPAKDD--PIAHFRYHTAPVTSIEWHPSDESMLAVSGADNQISIWDMSVEEDTEQ--HPSSEKL-DVPPQLLFIHQGQTDIKELHFHPQCPGLLVSTAADGFNVFKPA 487          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: CCA20692.1 (glutamaterich WD repeatcontaining protein putative [Albugo laibachii Nc14])

HSP 1 Score: 341.7 bits (875), Expect = 4.300e-90
Identity = 211/426 (49.53%), Postives = 286/426 (67.14%), Query Frame = 0
Query:  121 VYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEAKKP----SALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            V+LPG+++ L + +EL YD SAY +YH ++ EWP LS DI+RD LG  RT++P+T+Y V G+QA   E+N++++MK+S++H+       +                          +P L   +I H+GG+NR+RAMPQ SSIVATW+DT  VH+WD++    ++ +   A   +V   P+ ++ GH DEG+AMDWS V++G L+TGD    I+ W   E+G W +   K P+ GH SS+ED+QWSP EA+VF S S+D ++R+WD R K G M+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF    K   P+AHF +H  PITS+ WHP DES++A +  D+ +SIWDLSVEED D +       S      +PPQLLF+HQGQ++IKE+ FHPQ PG+L++TA DGFNVF+PA
Sbjct:   78 VFLPGVDT-LADDDELDYDSSAYDLYHAMSAEWPALSIDILRDDLGNCRTQFPMTVYMVAGSQAPKSEENQISIMKMSELHRCKTTQSESDDSDSENVVER---------------NPALTSRAIPHKGGINRIRAMPQSSSIVATWSDTGKVHIWDMSKQFDSLKADDKAVETSV--DPVQTFHGHPDEGFAMDWSLVTKGDLLTGDCSKFIYRWLPKESG-WVV--DKVPFSGHQSSIEDIQWSPNEATVFASGSADNSMRIWDTRRKAGSMIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----KAENPVAHFRYHTAPITSLEWHPCDESVIAVSGADNQISIWDLSVEEDVDVSDSATDSGSKGVQCEVPPQLLFIHQGQKDIKELHFHPQCPGVLVSTAGDGFNVFKPA 478          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: CCI49848.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 339.0 bits (868), Expect = 2.800e-89
Identity = 230/426 (53.99%), Postives = 300/426 (70.42%), Query Frame = 0
Query:  121 VYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEA----KKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            V+LPG+++ L E EEL YD SAY MYH +T EWP LS DI+RD LG  RT++P+T++ V G+QA   E+N++T+MK++++H+        XXXXXXXXXXXXXXXX                 +I H+GG+NR+R+M Q SSIVATW+DT  VH+WDI++ + +++    +    V+  P+ ++ GH +EG+AMDWS VS+G L+TGD    I+ W   E+  W I   K P+ GH SS+EDLQWSP EA+VF S S+DKT+R+WD R K G M+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF    K  TP+AHF +H  PITS+ WHP DES++A +  D+ +SIWDLSVEED D +       S      +PPQLLF+HQGQ++IKE+ FHPQ PG+L++TA DGFNVF+PA
Sbjct:   83 VFLPGVDT-LAEDEELDYDSSAYDMYHAITAEWPALSIDILRDDLGNCRTQFPMTVFMVAGSQALKSEENQITIMKMTELHRXXXXXXXXXXXXXXXXXXXXXXXXTR---------------TIPHKGGINRIRSMHQSSSIVATWSDTGKVHIWDISTQLDSLNGNDPSIATKVI--PVQTFHGHPEEGFAMDWSLVSKGHLLTGDCSKFIYRWLPQESA-WVI--DKVPFSGHQSSIEDLQWSPNEATVFASGSADKTIRIWDTRRKAGSMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----KAETPVAHFRYHTAPITSLEWHPCDESVIAVSGADNQISIWDLSVEEDVDASDFINDADSKGVQCEVPPQLLFIHQGQKDIKELHFHPQCPGVLVSTAGDGFNVFKPA 483          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: OQS00124.1 (glutamate-rich WD repeat-containing protein [Thraustotheca clavata])

HSP 1 Score: 336.7 bits (862), Expect = 1.400e-88
Identity = 244/418 (58.37%), Postives = 297/418 (71.05%), Query Frame = 0
Query:  121 VYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF-SPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEAKKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFN 538
            V+LP  E  L E E L YD SAY +Y+ +T EWP LSFDIVRD LG  RT++P+++Y V GTQA     NK+T+M               XXXXXXXXXXXXXXXXXXXXXXX   DP+LE  SIDH GGVNR+RAMPQ S+IVATWADT  VHL+DI+  ++++D  +     +   +P+ ++ GH DEG+AMDWS  + G L+TGD    I+ W       W +   K P+ GH SSVEDLQWSP E +VF S S+DKTLR+WDVR K   M+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F SPSK+E  PIAHF +H  P+TSI WHP DES+LA +  D+ +SIWD+SVEED ++   P+A  L  +PPQLLF+HQGQ +IKE+ FHPQ PGLL++TAADGFN
Sbjct:  246 VWLPNKEK-LGEDEVLDYDSSAYDLYYAMTAEWPSLSFDIVRDNLGACRTKFPMSIYVVAGTQAAKAADNKITVM------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPVLESRSIDHHGGVNRIRAMPQSSNIVATWADTRKVHLYDISKQLQSLDGKNPVGMSSQA-APVFTFTGHADEGFAMDWSPHTAGSLLTGDCSKYIYHWV-NNGSSWVV--DKVPFTGHKSSVEDLQWSPLEGTVFASCSTDKTLRIWDVRTKARSMIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFGSPSKEE--PIAHFRYHTAPVTSIEWHPSDESMLAVSGADNQISIWDMSVEEDTEQ--HPNAEKL-DVPPQLLFIHQGQTDIKELHFHPQCPGLLVSTAADGFN 641          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: OQR86127.1 (glutamate-rich WD repeat-containing protein [Achlya hypogyna])

HSP 1 Score: 335.1 bits (858), Expect = 4.000e-88
Identity = 238/425 (56.00%), Postives = 297/425 (69.88%), Query Frame = 0
Query:  118 APAVYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEAKKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            A  V+LP  E  L E E L YD SAY +Y+ ++ EWP LSFDIVRD LG  RT++P+++Y V GTQA     NK+T+M               XXXXXXXXXXXXXXXXXXXXXXX    P+LE  SI+H GGVNR+R+MPQ S+IVATWADT  VHL+DI+  ++++D  +     +   +P+ ++ GH DEG+AMDWS  + G L+TGD    I+ W       W +   K P+ GH +SVED+QWSP E SVF S S+DKTLR+WD+R K   M+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF  ++K+  PIAHF +H  P+TSI WHP DES+LA +  D+ +SIWD+SVEED   A+   A     +PPQLLF+HQGQ +IKE+ FHPQ PGLL++TA DGFNVF+PA
Sbjct:   82 ATKVWLPNKEK-LGEDEVLDYDSSAYDLYYAMSAEWPSLSFDIVRDNLGAVRTKFPMSIYMVAGTQAAKAADNKITIM------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLESRSIEHHGGVNRIRSMPQSSNIVATWADTRKVHLFDISKQLQSLDGKNPVGMSSTA-APIFTFTGHADEGFAMDWSPHTAGSLLTGDCSKYIYHWV-NNGSSWVV--DKIPFTGHKASVEDIQWSPLEGSVFASCSADKTLRIWDIRTKNRSMIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGSAQKD-DPIAHFRYHTAPVTSIEWHPSDESMLAVSGADNQISIWDMSVEED---AEHTPATEKLDVPPQLLFIHQGQTDIKELHFHPQCPGLLVSTAGDGFNVFKPA 485          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: OQR90587.1 (glutamate-rich WD repeat-containing protein [Achlya hypogyna])

HSP 1 Score: 328.2 bits (840), Expect = 4.900e-86
Identity = 236/426 (55.40%), Postives = 294/426 (69.01%), Query Frame = 0
Query:  118 APAVYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF-SPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEAKKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            A  V+LP  E  L + E L YD SAY +Y+ ++ EWP LSFDIVRD LG  RT++P+++Y V GTQA     N                    XXXXXXXXXXXXXXXXXXXXXXX    P+LE  SI+H GGVNR+R+MPQ S+IVATWADT  VHL+DI+  ++++D  +     +   +P+ ++ GH DEG+AMDWS  + G L+TGD    I+ W       W +   K P+ GH +SVED+QWSP E SVF S S+DKTLR+WD+R K   M+ +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F SP K E  PIAHF +H  P+TSI WHP DES+LA +  D+ +SIWD+SVEED   A++ +A     +PPQLLF+HQGQ +IKE+ FHPQ PGLL++TA DGFNVF+PA
Sbjct:   81 ATKVWLPNKEK-LGDDEVLDYDSSAYDLYYAMSAEWPSLSFDIVRDNLGAVRTKFPMSIYVVAGTQAAKATDN------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLESRSIEHHGGVNRIRSMPQSSNIVATWADTRKVHLFDISKQLQSLDGKNPVGMSSTT-APIFTFTGHADEGFAMDWSPHTAGSLLTGDCSKYIYHWV-NNGSSWVV--DKIPFTGHKASVEDIQWSPLEGSVFASCSADKTLRIWDIRTKNRSMIDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFGSPQKNE--PIAHFRYHTAPVTSIEWHPSDESMLAVSGADNQISIWDMSVEED---AEQTTATEKLDVPPQLLFIHQGQTDIKELHFHPQCPGLLVSTAGDGFNVFKPA 484          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: OZJ04836.1 (hypothetical protein BZG36_02327 [Bifiguratus adelaidae])

HSP 1 Score: 319.7 bits (818), Expect = 1.800e-83
Identity = 219/424 (51.65%), Postives = 278/424 (65.57%), Query Frame = 0
Query:  121 VYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSS---IVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGH-KDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEAKKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQ 541
            VYLPG     D  E L  D S Y+M H L  EWPCLSFD++RD LG  R  +P T Y V GTQA   + N++ +MK+SQ+HKT       XXXXXXXX                  DPLLE  S+ H GG+NR+R MPQQS+   + ATWADT  VH+WD++ +  +++ P   +      + L +   H  +EG+AMDWS+ + GR++TGD    I+L    + G    PD++ P+RGH SSVED+QWSP+E++VF SAS+D ++R+WD R KK   L + A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        TP+A F WH   ITSI WHP ++SILA +  DD VSIWDLSVE D +E+ K  A  +  +PPQLLFVHQGQQ+IKEV +HPQ+PG L++TA  GFNVF+
Sbjct:  379 VYLPGRPLAAD--EVLEADQSTYVMLHALEVEWPCLSFDVLRDDLGEERANFPQTAYVVTGTQAEKAKDNEVIVMKMSQLHKTXXXXXXXXXXXXXXXDE----------------DPLLEHRSVKHFGGINRVRVMPQQSASQQVAATWADTGKVHIWDLSHMTASLNQPGYGSR--TKHALLYTIDSHGANEGFAMDWSTTTAGRILTGDVANKIYLTSMTQTG--FQPDTQ-PFRGHTSSVEDIQWSPSESNVFASASADHSVRIWDCRGKKKEALKITASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSAPTPVATFKWHSQHITSIEWHPTEDSILAVSGADDQVSIWDLSVEPDTEESNKIIANGV-EVPPQLLFVHQGQQDIKEVHWHPQIPGCLISTAFSGFNVFK 778          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: CBN76255.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 313.9 bits (803), Expect = 9.600e-82
Identity = 222/420 (52.86%), Postives = 281/420 (66.90%), Query Frame = 0
Query:  130 LDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEED-------EDEAKKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            L EG+EL YD +AY MYH L PEWPCLSFD++RD LG  R+RYP T++AV GTQA+  + N+L +MKLS +H+T +K      XXXXXXXXXXXXXXXXXXXXX      L+  +I HRGGVNR+R+MPQ+  +VATW++T+ V++WD+   + A+ +        V   P  ++ GH +EG+A+DWS    GRL TGD    +H+    E G    P    P+                 +VF SAS+DKT+ VWD+R K G MLS+ AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF   +    P+A F WHK PITSI WHP DES+LA +  D+ +++WDLSVE D                  L  LPPQLLF+HQGQ +IKE+ FHPQ+PG++M+TAADGFN+F+PA
Sbjct:  137 LAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRK-----KXXXXXXXXXXXXXXXXXXXXXXXXXXTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDVYVWDLEEQVSALAAKGAPRKSKV--DPAFTFDGHMEEGFALDWSPTEEGRLATGDCGNSVHVTRTVEGGWVTDP---VPFVXXXXXXXXXXXXXXXXTVFASASADKTVAVWDLRKKNGAMLSLKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGSGE----PVAQFRWHKAPITSIEWHPTDESMLAVSGADNQLTVWDLSVEADXXXXXXXXXXXXXXXXXXLKDLPPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPA 542          
The following BLAST results are available for this feature:
BLAST of NO01G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002902551.15.400e-9355.32glutamate-rich WD repeat-containing protein [Phyto... [more]
OWZ02381.19.300e-9355.53Glutamate-rich WD repeat-containing protein [Phyto... [more]
XP_008617204.11.500e-9057.45hypothetical protein SDRG_12899 [Saprolegnia dicli... [more]
CCA20692.14.300e-9049.53glutamaterich WD repeatcontaining protein putative... [more]
CCI49848.12.800e-8953.99unnamed protein product [Albugo candida][more]
OQS00124.11.400e-8858.37glutamate-rich WD repeat-containing protein [Thrau... [more]
OQR86127.14.000e-8856.00glutamate-rich WD repeat-containing protein [Achly... [more]
OQR90587.14.900e-8655.40glutamate-rich WD repeat-containing protein [Achly... [more]
OZJ04836.11.800e-8351.65hypothetical protein BZG36_02327 [Bifiguratus adel... [more]
CBN76255.19.600e-8252.86conserved unknown protein [Ectocarpus siliculosus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008344NSK008344Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00440.1NO01G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668142gene_21Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101324g1gene1641Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00440.1NO01G00440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00440 ID=NO01G00440|Name=NO01G00440|organism=Nannochloropsis oceanica|type=gene|length=3855bp
ATGGCCAAGGGCAGTAGTAATGACAGCAAGAAAATGATGCTATCGTCTGG
TGGGGAAGGCGGGAAGCGGGGGCGTGGAAGGGAAGAGGAAGAGCAGGCAC
CAGCACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAAGAGGAAGC
AACAAGGAGACTAAGGATAATTTGCGGTTCGAAGATCCGTACGAAGACGA
GTTCGAAGAAGAATCTCAGGATGAGATGGAGGATGTAGTGGAGCTGGATT
CTGACGAGGAGGACGAGATGGATGTGGAGGCCTTGAAAGCCGCCCGGACA
Ggtacagcgtgggaatgaagggagggatagaggggaaaggagtctgtgga
tagacaagatcatttccttggacatcaaaatagcctatgatgctgcataa
cctatatgcttcctccgagaatttctcctcctccccaaatactctcacac
accaatcccctccctccctcccttcctccctccctccctccctctcttcc
tcccttcctcccttcctcaaaagGCCACGACGACGAGGATGACATGGACA
CGGAGGATGCCGCCACTCGCGCTGCACCCGCGGTGTATCTACCCGGAATG
GAGAGCGGGCTGGACGAGGGGGAGGAGTTGGTCTATGACCCGAGTGCGTA
CCTGATgtacgtggaggaaggaaggagggaggctgggagggagggagaga
gggagggagggagcatggagttgccagcggactcaccaataaacacaccc
tattttcagtctcgtacatccccccctcctttttggtagacatacacacc
cattcctccctccctcccttcctccctccctccttctgtccctccgtccc
tctgtccctccgtcccttcatcccttcctttgacccatgcgtagGTATCA
CGGCCTGACGCCGGAGTGGCCCTGTCTAAGTTTTGACATTGTGCGGGATC
CGCTGGGTGGAGGGCGCACGCGgtaagcaggaggaggaggaggaggagga
ggaggaggaggaggaggatgatgatgatgatggtggtgatgatgatggta
atgaggaggagtggaaaaggaggggtagatgcgcagaggagagagatcat
ggacgcattcaattggcgttgatgccttcaaaaccgaccctccctccctc
cttccttcctaccctccctccctccctccctccctccctccctccctccc
ttcctccctcccttcctccctccctccctccctcccacccgccctctatc
agATACCCCGTGACCATGTACGCTGTCTGTGGCACGCAGGCCAATGCTCG
GGAGAAGAACAAACTCACCTTGATGAAGCTAAGCCAGATGCACAAGACTT
ACAAGAAGCCCAAGCACGCCGACTCCGACAGCGGGAGTGACGAGGACAGT
GATGAGGAGAGTGATGATGACGAGGAAGAGGGAAACGGCCGGCATGTGGA
CCCATTGCTCGAGCAGTGCAGCATTGACCACCGCGGCGGgtaggtgccgt
ccctccttccctccttcctttcctccctccctcccacctctcccgcgtct
cacttcccctccctccctcccttcctccctcccttcctccctcccttcct
ccctctctctctccctccctccctccctccctccctccctcagGGTCAAT
CGTCTGCGAGCCATGCCCCAGCAGTCGTCCATCGTCGCGACATGGGCCGA
CACGGCCCATGTGCACCTGTGGGACATCGCTTCCCTCATCCGTGCCGTCG
ACAGCCCCTCCACTGCCACCAACGgtaggtcttccctcccttcctccctc
tttcgaaatgtctcccttcctgtgtcgcagcggcaccgtgactaacgctc
cctccctccctccctccctccctccctccctccctccctccctccctcct
tccctccctccctcccctccctccctccctccctccctccctccctccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
cttcctccatccctccctccctccctcccccagACGCCGTGGTGCGATCC
CCTCTCCTCTCGTATGCGGGGCATAAAGACGAGGGGTGGGCGATGGACTG
GTCATCCGTGAGCAGGGGCAGGTTGGTGACGGGCGACAACAGGGGAGATA
TTCACTTGTGGGAGgtgagggagggagggagggagggagggagggaggga
gacacatgaccaggggatgatcccaccacaataatcgccgctcattcgca
ttccctccctccctccctccctccctccctcctctcctcccttctatcct
ccagGGCGGGGAAGCGGGCCAGTGGGCGATACCTGACAGCAAGTCTCCCT
ATCGAGGGCACGGGTCGTCCGTCGAGGACCTGCAGTGGAGTCCGACAGAG
GCCTCGGgtaaggagggagggagggagggagggagggagggaggcgtagc
ttcacggtgtggtcttgttcgactcgatctttcaccacacaggctcacct
ccctccctccctccctccctccctccagTCTTCATCTCCGCCTCCTCCGA
CAAGACCCTCCGCGTGTGGGATGTGCGCAACAAGAAGGGATGCATGCTCT
CCGTCCCCGCCCACGCCACCGACGTCAATGTCTGCTCCTGGAATCGgtac
agccctccctccctccctccctccctccctccctcccgtcgggtccactg
tcccattctcctacaaccgctcacattcaccctccctccctcccttccta
tagCAATGTTGCCTATCTTGTCGTTACAGGTGCCGACGACGGATCGTTTA
AAGTGTGGGATTTAAGACAGTTTTCCCCCTCCAAGAAAGAGGCCACACCC
ATCGCGCATTTCACATGGCACAAAGgtaaggaaggaaggagggagggagg
gagggagggaggaagggagggaaggaggggaggagggaagaagggacagg
aagctgaacaaatctcgcgcggaactcaccgtgtgggtcttccctccctc
cctctctccctccctccctctctccctctctccctccctccctctctccc
tctctccctctctccctccctccctccctccctccctccctccctcccag
GCCCCATCACCTCCATCGCTTGGCACCCGCAAGACGAGTCCATCCTGGCC
TGCGCCTCCGAAGACGACACGgtacgtccctccctccctccctccctccc
tccctccttccctccttccctccctcccctccctccttccctccttccct
ccctccctccctccctccccccccccttgtccctctactcagtctcccct
tccatcaatttggcttcgttctcactttccccctccctccctccctccct
ccctccctccctccctccgtcctgcccagGTCTCCATATGGGATTTGTCG
GTGGAGGAGGACGAGGACGAGGCCAAGAAGCCTTCCGCCCTCCCCCTCAC
CCACCTCCCTCCGCAGCTCCTCTTCGTGCACCAGGGCCAACAAGAAATCA
AAGAGGTGTTGTTCCACCCGCAGgtaggaagcgagggagggagggaggga
gggagggagggagggaaggagggttgaccctgtatgcagccagtatactt
ccttcttctacattgctttatgaccctccctccctccctccctccctccc
tccctccctccctccctccctccctcccttgtgtagGTGCCAGGCCTGCT
GATGACAACAGCCGCCGACGGATTTAACGTCTTCCAGCCCGCCATCGGGC
TCTAG
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protein sequence of NO01G00440.1

>NO01G00440.1-protein ID=NO01G00440.1-protein|Name=NO01G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=546bp
MAKGSSNDSKKMMLSSGGEGGKRGRGREEEEQAPARGGGGGGGGGGGRGS
NKETKDNLRFEDPYEDEFEEESQDEMEDVVELDSDEEDEMDVEALKAART
GHDDEDDMDTEDAATRAAPAVYLPGMESGLDEGEELVYDPSAYLMYHGLT
PEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQM
HKTYKKPKHADSDSGSDEDSDEESDDDEEEGNGRHVDPLLEQCSIDHRGG
VNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSP
LLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSK
SPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAH
ATDVNVCSWNRNVAYLVVTGADDGSFKVWDLRQFSPSKKEATPIAHFTWH
KGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEAKKPSALPLTH
LPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPAIGL*
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Synonyms
Publications