NO01G00440, NO01G00440 (gene) Nannochloropsis oceanica

Overview
NameNO01G00440
Unique NameNO01G00440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3855
Alignment locationchr1:118479..122333 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlutamate-rich wd repeat containing 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:118479..122333 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR022052Histone-bd_RBBP4_N
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO01G00440 vs. NCBI_GenBank
Match: ETK87370.1 (hypothetical protein L915_08197 [Phytophthora parasitica] >ETL40787.1 hypothetical protein L916_08121 [Phytophthora parasitica] >ETP45270.1 hypothetical protein F442_08307 [Phytophthora parasitica P10297])

HSP 1 Score: 370.5 bits (950), Expect = 8.700e-99
Identity = 245/432 (56.71%), Postives = 306/432 (70.83%), Query Frame = 0
Query:  114 ATRAAPAVYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEA---KKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            A +    V++PG++  L + E L YD SAY MY+ +T EWP LS D+VRD LG  R+R+P+T++ V GTQA   + N++T+MK+S++HKT    KH          XXXXXXXXXXXXXX   DP+LE  SI H GGVNR+R MPQ S+IVATW+D   VHLWDIA  + ++D  + A   A  ++P+ +++GH DEG+AMDWS V  GRLVTGD    I+LW   E G W++   K P+ GH SSVEDLQWSPTEASVF S SSD+T+R+WD R K G ML    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF    K   P+AHF +H  P+TSI WHP DES+LA +  D+ +S+WD+SVEED + A   +  +      LPPQLLF+HQGQ +IKE+ FHPQ PG+LM+TA DGFNVF+PA
Sbjct:   74 AEKQVKKVFMPGVDK-LQDDEVLDYDSSAYDMYYAMTAEWPALSIDVVRDNLGAVRSRFPMTVFMVAGTQATNADDNQITVMKMSELHKT----KH--------NDXXXXXXXXXXXXXXXXXDPVLESRSIPHPGGVNRIRCMPQSSNIVATWSDRKKVHLWDIAKQLESLDGKAGAPLPA-KQAPVYTFSGHADEGFAMDWSPVQAGRLVTGDCSKFIYLWANSE-GAWSV--DKVPFTGHKSSVEDLQWSPTEASVFASCSSDRTVRIWDTRRKAGSMLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----KADNPVAHFRYHTAPVTSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAVPVQGENGEAKLDLPPQLLFIHQGQTDIKELHFHPQCPGVLMSTAGDGFNVFKPA 484          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: ETM47184.1 (hypothetical protein L914_08083 [Phytophthora parasitica])

HSP 1 Score: 370.5 bits (950), Expect = 8.700e-99
Identity = 245/432 (56.71%), Postives = 306/432 (70.83%), Query Frame = 0
Query:  114 ATRAAPAVYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEA---KKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            A +    V++PG++  L + E L YD SAY MY+ +T EWP LS D+VRD LG  R+R+P+T++ V GTQA   + N++T+MK+S++HKT    KH          XXXXXXXXXXXXXX   DP+LE  SI H GGVNR+R MPQ S+IVATW+D   VHLWDIA  + ++D  + A   A  ++P+ +++GH DEG+AMDWS V  GRLVTGD    I+LW   E G W++   K P+ GH SSVEDLQWSPTEASVF S SSD+T+R+WD R K G ML    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF    K   P+AHF +H  P+TSI WHP DES+LA +  D+ +S+WD+SVEED + A   +  +      LPPQLLF+HQGQ +IKE+ FHPQ PG+LM+TA DGFNVF+PA
Sbjct:   74 AEKQVKKVFMPGVDK-LQDDEVLDYDSSAYDMYYAMTAEWPALSIDVVRDNLGAVRSRFPMTVFMVAGTQATNADDNQITVMKMSELHKT----KH--------NDXXXXXXXXXXXXXXXXXDPVLESRSIPHPGGVNRIRCMPQSSNIVATWSDRKKVHLWDIAKQLESLDGKAGAPLPA-KQAPVYTFSGHADEGFAMDWSPVQAGRLVTGDCSKFIYLWANSE-GAWSV--DKVPFTGHKSSVEDLQWSPTEASVFASCSSDRTVRIWDTRRKAGSMLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----KADNPVAHFRYHTAPVTSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAVPVQGENGEAKLDLPPQLLFIHQGQTDIKELHFHPQCPGVLMSTAGDGFNVFKPA 484          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: ETL93920.1 (hypothetical protein L917_08019 [Phytophthora parasitica])

HSP 1 Score: 367.9 bits (943), Expect = 5.600e-98
Identity = 244/432 (56.48%), Postives = 305/432 (70.60%), Query Frame = 0
Query:  114 ATRAAPAVYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEA---KKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            A +    V++PG++  L + E L YD SAY MY+ +T EWP LS D+V D LG  R+R+P+T++ V GTQA   + N++T+MK+S++HKT    KH          XXXXXXXXXXXXXX   DP+LE  SI H GGVNR+R MPQ S+IVATW+D   VHLWDIA  + ++D  + A   A  ++P+ +++GH DEG+AMDWS V  GRLVTGD    I+LW   E G W++   K P+ GH SSVEDLQWSPTEASVF S SSD+T+R+WD R K G ML    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF    K   P+AHF +H  P+TSI WHP DES+LA +  D+ +S+WD+SVEED + A   +  +      LPPQLLF+HQGQ +IKE+ FHPQ PG+LM+TA DGFNVF+PA
Sbjct:   74 AEKQVKKVFMPGVDK-LQDDEVLDYDSSAYDMYYAMTAEWPALSIDVVPDNLGAVRSRFPMTVFMVAGTQATNADDNQITVMKMSELHKT----KH--------NDXXXXXXXXXXXXXXXXXDPVLESRSIPHPGGVNRIRCMPQSSNIVATWSDRKKVHLWDIAKQLESLDGKAGAPLPA-KQAPVYTFSGHADEGFAMDWSPVQAGRLVTGDCSKFIYLWANSE-GAWSV--DKVPFTGHKSSVEDLQWSPTEASVFASCSSDRTVRIWDTRRKAGSMLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----KADNPVAHFRYHTAPVTSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAVPVQGENGEAKLDLPPQLLFIHQGQTDIKELHFHPQCPGVLMSTAGDGFNVFKPA 484          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: XP_008905129.1 (hypothetical protein PPTG_11740 [Phytophthora parasitica INRA-310] >ETN09296.1 hypothetical protein PPTG_11740 [Phytophthora parasitica INRA-310] >ETO76146.1 hypothetical protein F444_08424 [Phytophthora parasitica P1976] >ETP17230.1 hypothetical protein F441_08350 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 367.9 bits (943), Expect = 5.600e-98
Identity = 244/432 (56.48%), Postives = 305/432 (70.60%), Query Frame = 0
Query:  114 ATRAAPAVYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEA---KKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            A +    V++PG++  L + E L YD SAY MY+ +T EWP LS D+V D LG  R+R+P+T++ V GTQA   + N++T+MK+S++HKT    KH          XXXXXXXXXXXXXX   DP+LE  SI H GGVNR+R MPQ S+IVATW+D   VHLWDIA  + ++D  + A   A  ++P+ +++GH DEG+AMDWS V  GRLVTGD    I+LW   E G W++   K P+ GH SSVEDLQWSPTEASVF S SSD+T+R+WD R K G ML    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF    K   P+AHF +H  P+TSI WHP DES+LA +  D+ +S+WD+SVEED + A   +  +      LPPQLLF+HQGQ +IKE+ FHPQ PG+LM+TA DGFNVF+PA
Sbjct:   74 AEKQVKKVFMPGVDK-LQDDEVLDYDSSAYDMYYAMTAEWPALSIDVVPDNLGAVRSRFPMTVFMVAGTQATNADDNQITVMKMSELHKT----KH--------NDXXXXXXXXXXXXXXXXXDPVLESRSIPHPGGVNRIRCMPQSSNIVATWSDRKKVHLWDIAKQLESLDGKAGAPLPA-KQAPVYTFSGHADEGFAMDWSPVQAGRLVTGDCSKFIYLWANSE-GAWSV--DKVPFTGHKSSVEDLQWSPTEASVFASCSSDRTVRIWDTRRKAGSMLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----KADNPVAHFRYHTAPVTSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAVPVQGENGEAKLDLPPQLLFIHQGQTDIKELHFHPQCPGVLMSTAGDGFNVFKPA 484          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: KUF80288.1 (Glutamate-rich WD repeat-containing protein [Phytophthora nicotianae] >KUF94847.1 hypothetical protein AM588_10008621 [Phytophthora nicotianae])

HSP 1 Score: 367.9 bits (943), Expect = 5.600e-98
Identity = 244/432 (56.48%), Postives = 305/432 (70.60%), Query Frame = 0
Query:  114 ATRAAPAVYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEA---KKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            A +    V++PG++  L + E L YD SAY MY+ +T EWP LS D+V D LG  R+R+P+T++ V GTQA   + N++T+MK+S++HKT    KH          XXXXXXXXXXXXXX   DP+LE  SI H GGVNR+R MPQ S+IVATW+D   VHLWDIA  + ++D  + A   A  ++P+ +++GH DEG+AMDWS V  GRLVTGD    I+LW   E G W++   K P+ GH SSVEDLQWSPTEASVF S SSD+T+R+WD R K G ML    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF    K   P+AHF +H  P+TSI WHP DES+LA +  D+ +S+WD+SVEED + A   +  +      LPPQLLF+HQGQ +IKE+ FHPQ PG+LM+TA DGFNVF+PA
Sbjct:   74 AEKQVKKVFMPGVDK-LQDDEVLDYDSSAYDMYYAMTAEWPALSIDVVPDNLGAVRSRFPMTVFMVAGTQATNADDNQITVMKMSELHKT----KH--------NDXXXXXXXXXXXXXXXXXDPVLESRSIPHPGGVNRIRCMPQSSNIVATWSDRKKVHLWDIAKQLESLDGKAGAPLPA-KQAPVYTFSGHADEGFAMDWSPVQAGRLVTGDCSKFIYLWANSE-GAWSV--DKVPFTGHKSSVEDLQWSPTEASVFASCSSDRTVRIWDTRRKAGSMLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----KADNPVAHFRYHTAPVTSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAVPVQGENGEAKLDLPPQLLFIHQGQTDIKELHFHPQCPGVLMSTAGDGFNVFKPA 484          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: ETI47448.1 (hypothetical protein F443_08365 [Phytophthora parasitica P1569])

HSP 1 Score: 367.5 bits (942), Expect = 7.300e-98
Identity = 246/432 (56.94%), Postives = 307/432 (71.06%), Query Frame = 0
Query:  114 ATRAAPAVYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEA---KKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            A +    V++PG++  L + E L YD SAY MY+ +T EWP LS D+V D LG  R+R+P+T++ V GTQA   + N++T+MK+S++HKT    KH  XXXXXXXXXXXXXXXX         DP+LE  SI H GGVNR+R MPQ S+IVATW+D   VHLWDIA  + ++D  + A   A  ++P+ +++GH DEG+AMDWS V  GRLVTGD    I+LW   E G W++   K P+ GH SSVEDLQWSPTEASVF S SSD+T+R+WD R K G ML    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF    K   P+AHF +H  P+TSI WHP DES+LA +  D+ +S+WD+SVEED + A   +  +      LPPQLLF+HQGQ +IKE+ FHPQ PG+LM+TA DGFNVF+PA
Sbjct:   74 AEKQVKKVFMPGVDK-LQDDEVLDYDSSAYDMYYAMTAEWPALSIDVVPDNLGAVRSRFPMTVFMVAGTQATNADDNQITVMKMSELHKT----KHNDXXXXXXXXXXXXXXXXG--------DPVLESRSIPHPGGVNRIRCMPQSSNIVATWSDRKKVHLWDIAKQLESLDGKAGAPLPA-KQAPVYTFSGHADEGFAMDWSPVQAGRLVTGDCSKFIYLWANSE-GAWSV--DKVPFTGHKSSVEDLQWSPTEASVFASCSSDRTVRIWDTRRKAGSMLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----KADNPVAHFRYHTAPVTSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAVPVQGENGEAKLDLPPQLLFIHQGQTDIKELHFHPQCPGVLMSTAGDGFNVFKPA 484          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: XP_008866519.1 (hypothetical protein H310_04109 [Aphanomyces invadans] >ETW05081.1 hypothetical protein H310_04109 [Aphanomyces invadans])

HSP 1 Score: 364.8 bits (935), Expect = 4.800e-97
Identity = 244/426 (57.28%), Postives = 305/426 (71.60%), Query Frame = 0
Query:  117 AAPAVYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEAKKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            A   V+LP +E  L E E L YD SAY +Y+ +T EWP LS DI++D LG  RT++P+T+Y V G+QA     NK+T+MK+S++HKT             XXXXXXXXXXXXXXXXX    P+LE  SIDHRGGVNR+RAMPQ S+IVATWADT  VH++DIA  ++++D  + A   A    P+ ++ GH DEG+AMDWS V+ G L+TGD    I+ W     G W +   K P+ GH SSVED+QWSPTEA+VF S SSD+T+R+WD+R K   MLSV  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F    +  +P+AHF +H  P+TSI WHP DES+LA +  D+ +SIWD+SVEED + A   +A     +PPQLLF+HQGQ +IKE+ FHPQ PGLL++TAADGFNVF+PA
Sbjct:   86 APKKVWLPNVEK-LGEDEVLDYDASAYDLYYAMTAEWPALSLDIIKDNLGACRTKFPMTIYVVAGSQAPKAADNKITVMKMSELHKT------------KXXXXXXXXXXXXXXXXXXXXXPVLESRSIDHRGGVNRIRAMPQSSNIVATWADTKRVHIYDIAKQLQSLDGKNPAGLSAQA-PPVFTFTGHADEGFAMDWSPVTAGSLLTGDCSKYIYHWV-NNGGSWVV--DKVPFTGHTSSVEDIQWSPTEATVFASCSSDRTVRIWDIRTKARSMLSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKF----QSDSPVAHFRYHTAPVTSIEWHPTDESMLAVSGADNQISIWDMSVEEDAEAANATTA--KLDVPPQLLFIHQGQTDIKELHFHPQCPGLLVSTAADGFNVFKPA 488          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: XP_009823676.1 (hypothetical protein H257_01921 [Aphanomyces astaci] >ETV86877.1 hypothetical protein H257_01921 [Aphanomyces astaci])

HSP 1 Score: 363.2 bits (931), Expect = 1.400e-96
Identity = 245/426 (57.51%), Postives = 306/426 (71.83%), Query Frame = 0
Query:  117 AAPAVYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEAKKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            A   V+LP +E  L E E L YD SAY +Y+ +T EWP LS DI++D LG  RT++P+T+Y V G+QA     NK+T+MK+S++HKT    KH        XXXXXXXXXXXXXXXX    P+LE  SIDHRGGVNR+RAMPQ S+IVATW+DT  VH++DIA  ++++D  + A  +A    P+ ++ GH DEG+AMDWS V+ G L+TGD    I+ W    A  W +   K P+ GH +SVEDLQWSPTEA+VF S S+DKT+R+WDVR K   MLSV  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F       +P+AHF +H  P+TSI WHP DES+LA +  D+ +SIWD+SVEED + A   +   L  +PPQLLF+HQGQ +IKE+ FHPQ PGLL++TAADGFNVF+PA
Sbjct:   84 APTKVWLPNVEK-LGEDEVLDYDASAYDLYYAMTAEWPSLSLDIIKDNLGACRTKFPMTIYVVAGSQAPKAADNKITVMKMSELHKT----KH--------XXXXXXXXXXXXXXXXXXXXPVLESRSIDHRGGVNRIRAMPQSSNIVATWSDTKRVHIYDIAKQLQSLDGKNPAGLNAQA-PPVFTFTGHADEGFAMDWSPVTAGSLLTGDCSKYIYHWVNNGA-SWVV--DKVPFTGHTASVEDLQWSPTEATVFASCSADKTVRIWDVRTKARSMLSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFQAD----SPVAHFRYHTAPVTSIEWHPTDESMLAVSGADNQISIWDMSVEEDAEAAANVTTAKL-DVPPQLLFIHQGQTDIKELHFHPQCPGLLVSTAADGFNVFKPA 487          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: XP_012195080.1 (hypothetical protein SPRG_01480 [Saprolegnia parasitica CBS 223.65] >KDO34344.1 hypothetical protein SPRG_01480 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 354.8 bits (909), Expect = 4.900e-94
Identity = 238/423 (56.26%), Postives = 300/423 (70.92%), Query Frame = 0
Query:  121 VYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF-SPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEAKKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            V+LP  E  L E E L YD SAY +Y+ ++ EWP LSFDIVRD LG  RT++P+++Y V GTQA     NK+T+MK++++HK        XXXXXXXXXXXXX             DP+LE  SIDH GG+NR+RAMPQ S+IVATWADT  VHL+DI+  ++++D  +     +   +P+ ++ GH DEG+AMDWS  + G L+TGD    I+ W    A  W +   K P+ GH +SVEDLQWSP E SVF S S+DKT+R+WD+R K   M+ V  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F SP+K E  PIAHF +H  P+TSI WHP DES+LA +  D+ +SIWD+SVEED ++   PS+  L  +PPQLLF+HQGQ +IKE+ FHPQ PGLL++TAADGFNVF+PA
Sbjct:   84 VWLPNKEK-LGEDEVLDYDSSAYDLYYAMSAEWPSLSFDIVRDNLGACRTKFPMSIYVVAGTQAAKASDNKITIMKMTELHKXXXXXXXXXXXXXXXXXXXXXEG-----------DPVLESRSIDHHGGINRIRAMPQSSNIVATWADTRKVHLYDISKQLQSLDGKNPVGMSSTA-APVFTFTGHADEGFAMDWSPHTAGSLLTGDCSKYIYHWVNNGA-SWVV--DKIPFTGHKASVEDLQWSPLEGSVFASCSADKTVRIWDIRTKTRSMIEVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFGSPAKDE--PIAHFRYHTAPVTSIEWHPSDESMLAVSGADNQISIWDMSVEEDTEQ--HPSSEKL-DVPPQLLFIHQGQTDIKELHFHPQCPGLLVSTAADGFNVFKPA 485          
BLAST of NO01G00440 vs. NCBI_GenBank
Match: XP_024575626.1 (glutamate-rich wd repeat-containing protein 1 [Plasmopara halstedii] >CEG39257.1 glutamate-rich wd repeat-containing protein 1 [Plasmopara halstedii])

HSP 1 Score: 354.8 bits (909), Expect = 4.900e-94
Identity = 237/425 (55.76%), Postives = 295/425 (69.41%), Query Frame = 0
Query:  121 VYLPGMESGLDEGEELVYDPSAYLMYHGLTPEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQMHKTYKKPKHAXXXXXXXXXXXXXXXXXXXXXXXRHVDPLLEQCSIDHRGGVNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSPLLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSKSPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPSKKEATPIAHFTWHKGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEA---KKPSALPLTHLPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPA 543
            V++PG++  L E E L YD SAY MY+ LT EWP LS D+VRD LG  R+R+P+T++ V GTQA+  + N++T+MK+S+++KT  K   A   XXXXXXXXXX             DP+LE  SI H GGVNR+R MPQ  +IVATW+D   VHLWDI+  + ++D           + P+ S+ GH DEG+AMDWS V  GRLVTGD    I+LW   + G W+I   K P+  H SSVEDLQWSPTEASVF S SSD+++R+WDVR K G ML +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF    K   P+AHF +H  PITSI WHP DES+LA +  D+ +S+WD+SVEED + A   +         LPPQLLF+HQGQ +IKE+ FHPQ PG+LM+TA DG+NVF+PA
Sbjct:   81 VFMPGVDK-LQEDEMLDYDSSAYDMYYALTAEWPALSIDVVRDSLGAVRSRFPMTIFMVAGTQASNPDDNQVTVMKMSELYKT--KNNDASDSXXXXXXXXXXTDG----------DPVLETRSIPHSGGVNRIRCMPQVPNIVATWSDRKKVHLWDISKQLESLDG-KVGGPLPTKQMPVYSFTGHTDEGFAMDWSPVEAGRLVTGDCSKFIYLWASSDGG-WSI--DKVPFVRHKSSVEDLQWSPTEASVFASCSSDRSVRIWDVRRKAGSMLDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----KADNPVAHFRYHTAPITSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAVTVQGEKDNRKLDLPPQLLFIHQGQTDIKELHFHPQCPGVLMSTAGDGYNVFKPA 484          
The following BLAST results are available for this feature:
BLAST of NO01G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETK87370.18.700e-9956.71hypothetical protein L915_08197 [Phytophthora para... [more]
ETM47184.18.700e-9956.71hypothetical protein L914_08083 [Phytophthora para... [more]
ETL93920.15.600e-9856.48hypothetical protein L917_08019 [Phytophthora para... [more]
XP_008905129.15.600e-9856.48hypothetical protein PPTG_11740 [Phytophthora para... [more]
KUF80288.15.600e-9856.48Glutamate-rich WD repeat-containing protein [Phyto... [more]
ETI47448.17.300e-9856.94hypothetical protein F443_08365 [Phytophthora para... [more]
XP_008866519.14.800e-9757.28hypothetical protein H310_04109 [Aphanomyces invad... [more]
XP_009823676.11.400e-9657.51hypothetical protein H257_01921 [Aphanomyces astac... [more]
XP_012195080.14.900e-9456.26hypothetical protein SPRG_01480 [Saprolegnia paras... [more]
XP_024575626.14.900e-9455.76glutamate-rich wd repeat-containing protein 1 [Pla... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008344NSK008344Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00440.1NO01G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668142gene_21Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101324g1gene1641Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00440.1NO01G00440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00440 ID=NO01G00440|Name=NO01G00440|organism=Nannochloropsis oceanica|type=gene|length=3855bp
ATGGCCAAGGGCAGTAGTAATGACAGCAAGAAAATGATGCTATCGTCTGG
TGGGGAAGGCGGGAAGCGGGGGCGTGGAAGGGAAGAGGAAGAGCAGGCAC
CAGCACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAAGAGGAAGC
AACAAGGAGACTAAGGATAATTTGCGGTTCGAAGATCCGTACGAAGACGA
GTTCGAAGAAGAATCTCAGGATGAGATGGAGGATGTAGTGGAGCTGGATT
CTGACGAGGAGGACGAGATGGATGTGGAGGCCTTGAAAGCCGCCCGGACA
Ggtacagcgtgggaatgaagggagggatagaggggaaaggagtctgtgga
tagacaagatcatttccttggacatcaaaatagcctatgatgctgcataa
cctatatgcttcctccgagaatttctcctcctccccaaatactctcacac
accaatcccctccctccctcccttcctccctccctccctccctctcttcc
tcccttcctcccttcctcaaaagGCCACGACGACGAGGATGACATGGACA
CGGAGGATGCCGCCACTCGCGCTGCACCCGCGGTGTATCTACCCGGAATG
GAGAGCGGGCTGGACGAGGGGGAGGAGTTGGTCTATGACCCGAGTGCGTA
CCTGATgtacgtggaggaaggaaggagggaggctgggagggagggagaga
gggagggagggagcatggagttgccagcggactcaccaataaacacaccc
tattttcagtctcgtacatccccccctcctttttggtagacatacacacc
cattcctccctccctcccttcctccctccctccttctgtccctccgtccc
tctgtccctccgtcccttcatcccttcctttgacccatgcgtagGTATCA
CGGCCTGACGCCGGAGTGGCCCTGTCTAAGTTTTGACATTGTGCGGGATC
CGCTGGGTGGAGGGCGCACGCGgtaagcaggaggaggaggaggaggagga
ggaggaggaggaggaggatgatgatgatgatggtggtgatgatgatggta
atgaggaggagtggaaaaggaggggtagatgcgcagaggagagagatcat
ggacgcattcaattggcgttgatgccttcaaaaccgaccctccctccctc
cttccttcctaccctccctccctccctccctccctccctccctccctccc
ttcctccctcccttcctccctccctccctccctcccacccgccctctatc
agATACCCCGTGACCATGTACGCTGTCTGTGGCACGCAGGCCAATGCTCG
GGAGAAGAACAAACTCACCTTGATGAAGCTAAGCCAGATGCACAAGACTT
ACAAGAAGCCCAAGCACGCCGACTCCGACAGCGGGAGTGACGAGGACAGT
GATGAGGAGAGTGATGATGACGAGGAAGAGGGAAACGGCCGGCATGTGGA
CCCATTGCTCGAGCAGTGCAGCATTGACCACCGCGGCGGgtaggtgccgt
ccctccttccctccttcctttcctccctccctcccacctctcccgcgtct
cacttcccctccctccctcccttcctccctcccttcctccctcccttcct
ccctctctctctccctccctccctccctccctccctccctcagGGTCAAT
CGTCTGCGAGCCATGCCCCAGCAGTCGTCCATCGTCGCGACATGGGCCGA
CACGGCCCATGTGCACCTGTGGGACATCGCTTCCCTCATCCGTGCCGTCG
ACAGCCCCTCCACTGCCACCAACGgtaggtcttccctcccttcctccctc
tttcgaaatgtctcccttcctgtgtcgcagcggcaccgtgactaacgctc
cctccctccctccctccctccctccctccctccctccctccctccctcct
tccctccctccctcccctccctccctccctccctccctccctccctccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
cttcctccatccctccctccctccctcccccagACGCCGTGGTGCGATCC
CCTCTCCTCTCGTATGCGGGGCATAAAGACGAGGGGTGGGCGATGGACTG
GTCATCCGTGAGCAGGGGCAGGTTGGTGACGGGCGACAACAGGGGAGATA
TTCACTTGTGGGAGgtgagggagggagggagggagggagggagggaggga
gacacatgaccaggggatgatcccaccacaataatcgccgctcattcgca
ttccctccctccctccctccctccctccctcctctcctcccttctatcct
ccagGGCGGGGAAGCGGGCCAGTGGGCGATACCTGACAGCAAGTCTCCCT
ATCGAGGGCACGGGTCGTCCGTCGAGGACCTGCAGTGGAGTCCGACAGAG
GCCTCGGgtaaggagggagggagggagggagggagggagggaggcgtagc
ttcacggtgtggtcttgttcgactcgatctttcaccacacaggctcacct
ccctccctccctccctccctccctccagTCTTCATCTCCGCCTCCTCCGA
CAAGACCCTCCGCGTGTGGGATGTGCGCAACAAGAAGGGATGCATGCTCT
CCGTCCCCGCCCACGCCACCGACGTCAATGTCTGCTCCTGGAATCGgtac
agccctccctccctccctccctccctccctccctcccgtcgggtccactg
tcccattctcctacaaccgctcacattcaccctccctccctcccttccta
tagCAATGTTGCCTATCTTGTCGTTACAGGTGCCGACGACGGATCGTTTA
AAGTGTGGGATTTAAGACAGTTTTCCCCCTCCAAGAAAGAGGCCACACCC
ATCGCGCATTTCACATGGCACAAAGgtaaggaaggaaggagggagggagg
gagggagggaggaagggagggaaggaggggaggagggaagaagggacagg
aagctgaacaaatctcgcgcggaactcaccgtgtgggtcttccctccctc
cctctctccctccctccctctctccctctctccctccctccctctctccc
tctctccctctctccctccctccctccctccctccctccctccctcccag
GCCCCATCACCTCCATCGCTTGGCACCCGCAAGACGAGTCCATCCTGGCC
TGCGCCTCCGAAGACGACACGgtacgtccctccctccctccctccctccc
tccctccttccctccttccctccctcccctccctccttccctccttccct
ccctccctccctccctccccccccccttgtccctctactcagtctcccct
tccatcaatttggcttcgttctcactttccccctccctccctccctccct
ccctccctccctccctccgtcctgcccagGTCTCCATATGGGATTTGTCG
GTGGAGGAGGACGAGGACGAGGCCAAGAAGCCTTCCGCCCTCCCCCTCAC
CCACCTCCCTCCGCAGCTCCTCTTCGTGCACCAGGGCCAACAAGAAATCA
AAGAGGTGTTGTTCCACCCGCAGgtaggaagcgagggagggagggaggga
gggagggagggagggaaggagggttgaccctgtatgcagccagtatactt
ccttcttctacattgctttatgaccctccctccctccctccctccctccc
tccctccctccctccctccctccctcccttgtgtagGTGCCAGGCCTGCT
GATGACAACAGCCGCCGACGGATTTAACGTCTTCCAGCCCGCCATCGGGC
TCTAG
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protein sequence of NO01G00440.1

>NO01G00440.1-protein ID=NO01G00440.1-protein|Name=NO01G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=546bp
MAKGSSNDSKKMMLSSGGEGGKRGRGREEEEQAPARGGGGGGGGGGGRGS
NKETKDNLRFEDPYEDEFEEESQDEMEDVVELDSDEEDEMDVEALKAART
GHDDEDDMDTEDAATRAAPAVYLPGMESGLDEGEELVYDPSAYLMYHGLT
PEWPCLSFDIVRDPLGGGRTRYPVTMYAVCGTQANAREKNKLTLMKLSQM
HKTYKKPKHADSDSGSDEDSDEESDDDEEEGNGRHVDPLLEQCSIDHRGG
VNRLRAMPQQSSIVATWADTAHVHLWDIASLIRAVDSPSTATNDAVVRSP
LLSYAGHKDEGWAMDWSSVSRGRLVTGDNRGDIHLWEGGEAGQWAIPDSK
SPYRGHGSSVEDLQWSPTEASVFISASSDKTLRVWDVRNKKGCMLSVPAH
ATDVNVCSWNRNVAYLVVTGADDGSFKVWDLRQFSPSKKEATPIAHFTWH
KGPITSIAWHPQDESILACASEDDTVSIWDLSVEEDEDEAKKPSALPLTH
LPPQLLFVHQGQQEIKEVLFHPQVPGLLMTTAADGFNVFQPAIGL*
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Synonyms
Publications