NO01G00430, NO01G00430 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00430 vs. NCBI_GenBank
Match: CBN80033.1 (pyruvate dehydrogenase [Ectocarpus siliculosus]) HSP 1 Score: 351.7 bits (901), Expect = 2.600e-93 Identity = 177/236 (75.00%), Postives = 197/236 (83.47%), Query Frame = 0 Query: 5 LSRRSSAAVLATTGRRGMATIEVPVREAINQAIDEEMARDPSVFCLGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEMGFAGIAVGAAYKDLRPIVEFMTFNFSLQAIDQVINSGAKQLYMSGGTIPVPVVFRGPNGAAAGVGAQHSQDFASWYSQVPGLKVLSPWSSEDAKGLMKAAIRDNNPVVVLENELLYGVSFPFSDEAQRDDFVLPIGKAKVRQ---TPSIPTFRPSV 238 LS ++AA +R M TIEV VREAINQ +DEEM RD VF +GEEVAQYQGAYKVTKGLYQKYG++RVIDTPITEMGF G+A GAAYKDLRP+VEFMTFNFSLQAIDQ++NS AKQLYMS G PVPVVFRGPNGAA+GVGAQHSQ FA+WYS VP LKV+SPWSSEDAKGL+K+AIRD NPVV LENELLYGV+FP +DEAQ +DFV+PIGKAKV Q SI TF V Sbjct: 13 LSSAAAAAGWRQPAKRSMGTIEVAVREAINQGLDEEMGRDERVFLMGEEVAQYQGAYKVTKGLYQKYGEQRVIDTPITEMGFTGLATGAAYKDLRPVVEFMTFNFSLQAIDQILNSAAKQLYMSAGDCPVPVVFRGPNGAASGVGAQHSQCFAAWYSSVPALKVVSPWSSEDAKGLIKSAIRDPNPVVFLENELLYGVAFPMTDEAQGEDFVIPIGKAKVEQEGTDVSIVTFSKMV 248
BLAST of NO01G00430 vs. NCBI_GenBank
Match: XP_002296440.1 (pyruvate dehydrogenase [Thalassiosira pseudonana CCMP1335] >EED87136.1 pyruvate dehydrogenase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 335.1 bits (858), Expect = 2.500e-88 Identity = 160/205 (78.05%), Postives = 182/205 (88.78%), Query Frame = 0 Query: 22 MATIEVPVREAINQAIDEEMARDPSVFCLGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEMGFAGIAVGAAYKDLRPIVEFMTFNFSLQAIDQVINSGAKQLYMSGGTIPVPVVFRGPNGAAAGVGAQHSQDFASWYSQVPGLKVLSPWSSEDAKGLMKAAIRDNNPVVVLENELLYGVSFPFSDEAQRDDFVLPIGKAKVRQ 227 MAT EV VR+AINQAIDEEM RD VF LGEEVAQYQGAYKVTKGL+QKYG KRVIDTPITEMGF G+A+GAAYKDLRP+VEFMT+NFS+QAIDQ++NS AKQ YMS G I P+VFRGPNG AAG AQHSQ FA+WYS VPGLKV++P++SEDAKGLMKAAIRDNNPVVVLE+EL+YGVSFP S+EAQ +FV+PIGKAK+ + Sbjct: 1 MATTEVTVRDAINQAIDEEMERDEKVFILGEEVAQYQGAYKVTKGLFQKYGSKRVIDTPITEMGFTGMAIGAAYKDLRPVVEFMTWNFSMQAIDQIVNSAAKQYYMSAGDIACPIVFRGPNGNAAGTSAQHSQCFAAWYSSVPGLKVVAPYNSEDAKGLMKAAIRDNNPVVVLEHELMYGVSFPMSEEAQSSEFVIPIGKAKIER 205
BLAST of NO01G00430 vs. NCBI_GenBank
Match: XP_002180179.1 (precursor of dehydrogenase pyruvate dehydrogenase E1 component beta subunit [Phaeodactylum tricornutum CCAP 1055/1] >EEC48370.1 precursor of dehydrogenase pyruvate dehydrogenase E1 component beta subunit [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 332.4 bits (851), Expect = 1.600e-87 Identity = 164/228 (71.93%), Postives = 193/228 (84.65%), Query Frame = 0 Query: 1 MLSLLSRRSSAAVLATTG----RRGMATIEVPVREAINQAIDEEMARDPSVFCLGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEMGFAGIAVGAAYKDLRPIVEFMTFNFSLQAIDQVINSGAKQLYMSGGTIPVPVVFRGPNGAAAGVGAQHSQDFASWYSQVPGLKVLSPWSSEDAKGLMKAAIRDNNPVVVLENELLYGVSFPFSDEAQRDDFVLPIGKAKV 225 MLS L R S+ + + +G RR ATI++ +REAIN IDEEMARD SVF +GEEVAQYQGAYKVTKGLY+KYGDKRVIDTPITEMGF G+AVGAAYK+LRPIVEFMT NFS+QAIDQV+NS AKQ YMSGG + P+VFRGPNG +AG AQHSQ FA+WYS +PGLKV++P+SSEDAKGL+KAAIRD NPV++LE+EL+YGV+FP SDEAQ DFVLP+ KAK+ Sbjct: 1 MLSFL-RHSTTTIASRSGAPVSRRAFATIDMTIREAINAGIDEEMARDESVFIIGEEVAQYQGAYKVTKGLYEKYGDKRVIDTPITEMGFTGLAVGAAYKNLRPIVEFMTINFSMQAIDQVVNSAAKQFYMSGGDLACPIVFRGPNGFSAGTAAQHSQCFAAWYSSIPGLKVVAPYSSEDAKGLIKAAIRDPNPVMILEHELMYGVAFPMSDEAQSADFVLPLDKAKI 227
BLAST of NO01G00430 vs. NCBI_GenBank
Match: GAX14194.1 (pyruvate dehydrogenase E1 component beta subunit [Fistulifera solaris]) HSP 1 Score: 329.3 bits (843), Expect = 1.400e-86 Identity = 167/229 (72.93%), Postives = 188/229 (82.10%), Query Frame = 0 Query: 1 MLSLLSRRS-----SAAVLATTGRRGMATIEVPVREAINQAIDEEMARDPSVFCLGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEMGFAGIAVGAAYKDLRPIVEFMTFNFSLQAIDQVINSGAKQLYMSGGTIPVPVVFRGPNGAAAGVGAQHSQDFASWYSQVPGLKVLSPWSSEDAKGLMKAAIRDNNPVVVLENELLYGVSFPFSDEAQRDDFVLPIGKAKV 225 MLS SR S ++ LA + R A +V VREAIN AIDEEM RD SVF LGEEVAQYQGAYKVTKGLY+KYGDKRVIDTPITEMGF G+A+GAAYKDLRPIVEFMT NFS+QA+DQVINS AKQ YMS G + P+VFRGPNG +AG AQHSQ F +WYS VPGLKV+SP+SSEDAKGLMKAAIRD NPVVVLE+EL+YGVSFP S+EA DFV+PIG+AK+ Sbjct: 1 MLSNFSRHSFVRVGKSSALAKSTRSFAAATQVAVREAINAAIDEEMERDESVFILGEEVAQYQGAYKVTKGLYEKYGDKRVIDTPITEMGFTGLAIGAAYKDLRPIVEFMTMNFSMQAMDQVINSAAKQYYMSAGDLACPIVFRGPNGFSAGTAAQHSQCFGAWYSSVPGLKVVSPYSSEDAKGLMKAAIRDPNPVVVLEHELMYGVSFPMSEEAMSKDFVIPIGQAKI 229
BLAST of NO01G00430 vs. NCBI_GenBank
Match: GAX28879.1 (pyruvate dehydrogenase E1 component beta subunit [Fistulifera solaris]) HSP 1 Score: 328.6 bits (841), Expect = 2.300e-86 Identity = 166/229 (72.49%), Postives = 188/229 (82.10%), Query Frame = 0 Query: 1 MLSLLSRRS-----SAAVLATTGRRGMATIEVPVREAINQAIDEEMARDPSVFCLGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEMGFAGIAVGAAYKDLRPIVEFMTFNFSLQAIDQVINSGAKQLYMSGGTIPVPVVFRGPNGAAAGVGAQHSQDFASWYSQVPGLKVLSPWSSEDAKGLMKAAIRDNNPVVVLENELLYGVSFPFSDEAQRDDFVLPIGKAKV 225 MLS SR S ++ LA + R A ++ VREAIN AIDEEM RD SVF LGEEVAQYQGAYKVTKGLY+KYGDKRVIDTPITEMGF G+A+GAAYKDLRPIVEFMT NFS+QA+DQVINS AKQ YMS G + P+VFRGPNG +AG AQHSQ F +WYS VPGLKV+SP+SSEDAKGLMKAAIRD NPVVVLE+EL+YGVSFP S+EA DFV+PIG+AK+ Sbjct: 1 MLSSFSRNSFVRVAKSSALAKSTRAFTAATQMAVREAINAAIDEEMERDESVFILGEEVAQYQGAYKVTKGLYEKYGDKRVIDTPITEMGFTGLAIGAAYKDLRPIVEFMTMNFSMQAMDQVINSAAKQYYMSAGDLACPIVFRGPNGFSAGTAAQHSQCFGAWYSSVPGLKVVSPYSSEDAKGLMKAAIRDPNPVVVLEHELMYGVSFPMSEEAMSKDFVIPIGQAKI 229
BLAST of NO01G00430 vs. NCBI_GenBank
Match: EJK70442.1 (hypothetical protein THAOC_08200 [Thalassiosira oceanica]) HSP 1 Score: 324.3 bits (830), Expect = 4.400e-85 Identity = 156/210 (74.29%), Postives = 179/210 (85.24%), Query Frame = 0 Query: 14 LATTGRRGMATIEVPVREAINQAIDEEMARDPSVFCLGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEMGFAGIAVGAAYKDLRPIVEFMTFNFSLQAIDQVINSGAKQLYMSGGTIPVPVVFRGPNGAAAGVGAQHSQDFASWYSQVPGLKVLSPWSSEDAKGLMKAAIRDNNPVVVLENELLYGVSFPFSDEAQRDDFVLPIGKAK 224 L +R MAT+++ VR+AIN AIDEEM RD V+ LGEEVAQY GAYKVTKGLYQKYG KRVIDTPITEMGF G+A+G+AYKDLRPIVEFMT+NFS+QAIDQVINS AKQ YMS G I P+VFRGPNG AAG AQHSQ FA+WYS VPGLKV+SP++SEDA+GL KAAIRDNNPVV+LE+EL+YG SFP SDEAQ DFV+PIG+ + Sbjct: 44 LLAQSKRSMATVDMTVRDAINSAIDEEMDRDEKVYVLGEEVAQYDGAYKVTKGLYQKYGAKRVIDTPITEMGFTGMAIGSAYKDLRPIVEFMTWNFSMQAIDQVINSAAKQYYMSAGDIACPIVFRGPNGNAAGTSAQHSQCFAAWYSSVPGLKVVSPYNSEDARGLTKAAIRDNNPVVILEHELMYGTSFPVSDEAQSHDFVIPIGRQR 253
BLAST of NO01G00430 vs. NCBI_GenBank
Match: XP_009039032.1 (hypothetical protein AURANDRAFT_65618 [Aureococcus anophagefferens] >EGB06463.1 hypothetical protein AURANDRAFT_65618 [Aureococcus anophagefferens]) HSP 1 Score: 321.6 bits (823), Expect = 2.800e-84 Identity = 153/212 (72.17%), Postives = 180/212 (84.91%), Query Frame = 0 Query: 22 MATIEVPVREAINQAIDEEMARDPSVFCLGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEMGFAGIAVGAAYKDLRPIVEFMTFNFSLQAIDQVINSGAKQLYMSGGTIPVPVVFRGPNGAAAGVGAQHSQDFASWYSQVPGLKVLSPWSSEDAKGLMKAAIRDNNPVVVLENELLYGVSFPFSDEAQRDDFVLPIGKAKVRQTPSIPTF 234 MAT++V +REA+N A+DEEM D S+F +GEEVAQYQGAYKVTKGL+QKYG++RVIDTPITEMGFAGIA GAAYKDL+PI EFMTFNF++QAIDQ++NS AKQ YM+ G P+VFRGPNGAAAGV AQHSQ FA+W+SQ PGLKV++P+ +EDAKGL+KAAIRD NPVV LENELLYG SFP SD AQ DFVLP+GKA V + + TF Sbjct: 1 MATVDVTIREALNMAMDEEMETDESIFVMGEEVAQYQGAYKVTKGLFQKYGERRVIDTPITEMGFAGIATGAAYKDLKPICEFMTFNFAMQAIDQIVNSAAKQAYMTNGDFGCPIVFRGPNGAAAGVAAQHSQCFAAWFSQCPGLKVVAPYDAEDAKGLLKAAIRDPNPVVFLENELLYGASFPLSDAAQSKDFVLPLGKAHVAKEGTDVTF 212
BLAST of NO01G00430 vs. NCBI_GenBank
Match: XP_008701312.1 (PREDICTED: pyruvate dehydrogenase E1 component subunit beta, mitochondrial [Ursus maritimus]) HSP 1 Score: 320.9 bits (821), Expect = 4.900e-84 Identity = 154/208 (74.04%), Postives = 177/208 (85.10%), Query Frame = 0 Query: 19 RRGMATIEVPVREAINQAIDEEMARDPSVFCLGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEMGFAGIAVGAAYKDLRPIVEFMTFNFSLQAIDQVINSGAKQLYMSGGTIPVPVVFRGPNGAAAGVGAQHSQDFASWYSQVPGLKVLSPWSSEDAKGLMKAAIRDNNPVVVLENELLYGVSFPFSDEAQRDDFVLPIGKAKVRQ 227 R AT++V VREAINQ +DEE+ RD VF LGEEVAQY GAYKV++GL++KYGDKR+IDTPI+EMGFAGIAVGAA LRPI EFMTFNFS+QAIDQVINS AK YMSGG PVP+VFRGPNGA+AGV AQHSQ FA+WY PGLKV+SPW+SEDAKGL+K+AIRDNNPVVVLENEL+YGV F F EAQ DF++PIGKAK+ + Sbjct: 25 RTAPATLQVTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPSEAQSKDFLIPIGKAKIER 232
BLAST of NO01G00430 vs. NCBI_GenBank
Match: XP_014724180.1 (PREDICTED: pyruvate dehydrogenase E1 component subunit beta, mitochondrial [Equus asinus]) HSP 1 Score: 320.5 bits (820), Expect = 6.300e-84 Identity = 154/208 (74.04%), Postives = 177/208 (85.10%), Query Frame = 0 Query: 19 RRGMATIEVPVREAINQAIDEEMARDPSVFCLGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEMGFAGIAVGAAYKDLRPIVEFMTFNFSLQAIDQVINSGAKQLYMSGGTIPVPVVFRGPNGAAAGVGAQHSQDFASWYSQVPGLKVLSPWSSEDAKGLMKAAIRDNNPVVVLENELLYGVSFPFSDEAQRDDFVLPIGKAKVRQ 227 R A ++V VREAINQ +DEE+ RD VF LGEEVAQY GAYKV++GL++KYGDKR+IDTPI+EMGFAGIAVGAA LRPI EFMTFNFS+QAIDQVINS AK YMSGG PVP+VFRGPNGA+AGV AQHSQ FA+WY PGLKV+SPW+SEDAKGL+K+AIRDNNPVVVLENEL+YGV F FS EAQ DF++PIGKAK+ + Sbjct: 25 RTAPAALQVTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFSSEAQSKDFLVPIGKAKIER 232
BLAST of NO01G00430 vs. NCBI_GenBank
Match: PAV20843.1 (Thiamin diphosphate-binding protein [Phellinus noxius]) HSP 1 Score: 320.5 bits (820), Expect = 6.300e-84 Identity = 154/208 (74.04%), Postives = 177/208 (85.10%), Query Frame = 0 Query: 20 RGMAT---IEVPVREAINQAIDEEMARDPSVFCLGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEMGFAGIAVGAAYKDLRPIVEFMTFNFSLQAIDQVINSGAKQLYMSGGTIPVPVVFRGPNGAAAGVGAQHSQDFASWYSQVPGLKVLSPWSSEDAKGLMKAAIRDNNPVVVLENELLYGVSFPFSDEAQRDDFVLPIGKAKV 225 RG AT ++ VREA+N A++EEM RD SVF LGEEVA+Y GAYKVTKGL K+G+KRV+DTPITEMGFAGIAVGAA LRP+ EFMTFNF++QAIDQ++NS K YMSGG +P PVVFRGPNGAAAGVGAQHSQD+ASWY Q+PGLKV+SPWS+ED KGL+KAAIRD NPVV LENE+LYGV+FP S EA D+FVLPIGKAKV Sbjct: 66 RGYATQSEHQMTVREALNTAMEEEMIRDESVFILGEEVARYNGAYKVTKGLLDKFGEKRVVDTPITEMGFAGIAVGAALSGLRPVCEFMTFNFAMQAIDQIVNSAGKTYYMSGGNVPCPVVFRGPNGAAAGVGAQHSQDYASWYGQIPGLKVVSPWSAEDCKGLLKAAIRDPNPVVFLENEMLYGVTFPMSQEAMSDNFVLPIGKAKV 273 The following BLAST results are available for this feature:
BLAST of NO01G00430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00430 ID=NO01G00430|Name=NO01G00430|organism=Nannochloropsis oceanica|type=gene|length=3988bpback to top protein sequence of NO01G00430.2 >NO01G00430.2-protein ID=NO01G00430.2-protein|Name=NO01G00430.2|organism=Nannochloropsis oceanica|type=polypeptide|length=336bpback to top protein sequence of NO01G00430.1 >NO01G00430.1-protein ID=NO01G00430.1-protein|Name=NO01G00430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bpback to top Synonyms
Publications
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