NO01G00420, NO01G00420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00420 vs. NCBI_GenBank
Match: XP_013903768.1 (peptide-methionine (S)-S-oxidereductase [Monoraphidium neglectum] >KIZ04749.1 peptide-methionine (S)-S-oxidereductase [Monoraphidium neglectum]) HSP 1 Score: 197.2 bits (500), Expect = 9.000e-47 Identity = 127/350 (36.29%), Postives = 185/350 (52.86%), Query Frame = 0 Query: 38 SSTACRSFSLSNKAL----GAAVARAGNVLTVDLSITLEDGTDMPADFDMGK-NVRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTL-QLVESAESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEA--SGEYDEPIVTEISPADTFFKAEEYHLQYLMKNG-----QSARKNDPTPVRCYG 375 ++ CR + + + L A A G+ +TV + TL+DG+ + G+ + F++G G AV G+ E++ V + P+E YG PE +PA+ AP+GL GD+V L+NG+ A V+ D + TID N G+ LT L L+++A +Q T AGCFWG +L R+PGV++T GY+ P+Y +VCSG TG E V+V++D +++ ++L+ FW +HDPT D QG D GTQYR GIY T+EEQ A+E+ +EA + I TE+ P + AE YH YL K G QS K P+RCYG Sbjct: 15 AAAPCRPAAAARRTLCVTASQAKAAEGDFVTVHYTGTLDDGSVFDSSRQDGRAPLEFQIGAG---RGFDKAVTGLAVGETRKVRLTPEEGYGERDPEAVITVPADRAPKGLSEGDRVGLSNGMQAVVSKVDPSGDV-TIDLNPELAGKHLTFDVELMSLIQAAGAQ---TIVFGAGCFWGPQLLFDRVPGVISTEVGYSQGKVPN-----------PSYEDVCSGTTGHTEVVKVVYDPDAVTFGQLLDTFWAKHDPTSKDRQGADSGTQYRAGIYTTTEEQ---AQEAARYIEAKRAAMPGLKIYTELEPLKEYSAAEPYHQNYLAKGGRFGQPQSPAKGCNDPIRCYG 343
BLAST of NO01G00420 vs. NCBI_GenBank
Match: EJK48873.1 (hypothetical protein THAOC_32295, partial [Thalassiosira oceanica]) HSP 1 Score: 184.9 bits (468), Expect = 4.600e-43 Identity = 115/301 (38.21%), Postives = 154/301 (51.16%), Query Frame = 0 Query: 90 RLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENA---PRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFA-----------TAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKR--HDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNGQSARKNDPTPVRCYG 375 RL G P +HS + M E+ D YG+Y P+ EI E+ +++G ++++ NG+T RVT+ T+T+D NH G + L VE Q A A GCFWG ELA QRLPGVV+T GYT PTY EV SG TG EAV V++D ++Y ++E+ R D + + GND GTQYR G+YY +EQR+ AE S R+ G E ++TE+ A F+ AEEYH QYL+K GQSARK + +RCYG Sbjct: 1 RLDGGNYLPGLHSLLSTMSPGETVRGAT-LDAGYGSYRPDAVFEISTEDVGIDKSAVQIGTRLQMGNGVTVRVTSMT--DETWTLDANHELAGTAYKADVRLDAVEDGPGQDLAYAPGGTDGRYRVATFGLGCFWGGELAYQRLPGVVSTEVGYTQGAKED-----------PTYEEVSSGTTGHTEAVRVVYDPDEVTYGELVELGLSRLGQDVYELNKVGNDRGTQYRSGVYYHDDEQREAAERSVERLRKDGGGRE-VMTEVKEATVFYPAEEYHQQYLLKGGQSARKGETEGIRCYG 286
BLAST of NO01G00420 vs. NCBI_GenBank
Match: GAX15673.1 (peptide-methionine (S)-S-oxide reductase [Fistulifera solaris]) HSP 1 Score: 183.0 bits (463), Expect = 1.800e-42 Identity = 139/390 (35.64%), Postives = 187/390 (47.95%), Query Frame = 0 Query: 9 LLLLTQAAVLLLLFPSALAFLRIPSSTPTSSTACRSFSLSNKALGAAVARAGNVLTVDLSITLE---------DGTDMPADFDMGKNVRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENA----PRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESA---------ESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKR--HDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNGQSARKNDPTPVRCYG 375 L L + A L +A F + P ++ A +FS K A + G+++TVD + E DG + D + F LG G P +H V G+ ES V D +G +L A + A P ++ G ++ L NGL VT + FTID N P G + + TL VE ++ F A A GCFWG ELA R PGVVATA GYT APTY EVCSG TG EA+ V +D V+SY R++ + R + + GND GTQYR G+Y+ + EQ+++AE G++ E VTE PA+ F+ AE+YH QYL+K GQSARK D T +RCYG Sbjct: 4 LKLYSLAIFLFFTKGNAWIFPKTPVTSTLRFAATETFSEEEKP--AIRIQEGSIVTVDCRLKPEGDYVPEPLIDGVVL-HDESPPARLTFALGRGNYLPGLHDLVQGLQVGESVN-GVSLDAGWGERRSDLVATVEFAQAAIDDPSQIRPGVELMLANGLKCVVT--KVKEKDFTIDANPPLAGATYEASVTLISVEDGPTMTVFGEKQTSRFQVATFALGCFWGGELAYMREPGVVATAVGYT-----------QGQRVAPTYEEVCSGTTGHTEAIAVTYDPDVVSYERLVHLAMDRLGENKYLKNQVGNDRGTQYRHGVYFHTPEQKRIAE------AIVGDFGEDCVTECLPAEKFWFAEDYHQQYLLKGGQSARKGDDTTIRCYG 370
BLAST of NO01G00420 vs. NCBI_GenBank
Match: XP_005711994.1 (peptide methionine sulfoxide reductase [Chondrus crispus] >CDF32329.1 peptide methionine sulfoxide reductase [Chondrus crispus]) HSP 1 Score: 182.2 bits (461), Expect = 3.000e-42 Identity = 114/305 (37.38%), Postives = 154/305 (50.49%), Query Frame = 0 Query: 71 LEDGTDMPADFDMGKNVRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRGLK--VGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQC------FATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKR--HDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNGQSARKN 366 L+DG+ + + G + F +G G + AV G+ ES+ + + YG ++ +IP P G++ VG KV L+NG+ A V D +D NH G++LT ++LV E A GCFWG ELA QR+ GVVAT GYT PTY +VCSG+TG EAV V FD +S+ +++EVFW+R + GND+GTQYR GIY S EQ +VAEESK + D + E + F+ AEEYH QYL K GQSA K+ Sbjct: 82 LDDGSQFDSSRERGTPLSFVVGAGTVIRGFDDAVRGLQVGESRRTRIEAERGYGERSDDMVVKIPRSRVPEGMEVVVGSKVPLSNGMMAVVLGADA--EEIELDANHELAGKALTF--DMELVGFEEGVLGEVGPGMERAVFGLGCFWGAELAFQRVAGVVATRVGYT-----------HGQTEKPTYEQVCSGRTGHAEAVAVDFDPARVSFEQLVEVFWERLGQSAMTPNQVGNDVGTQYRSGIYVQSSEQERVAEESKRKARERFGKDTVVEIESAEGVPFYLAEEYHQQYLEKGGQSAAKD 371
BLAST of NO01G00420 vs. NCBI_GenBank
Match: GAX13577.1 (peptide-methionine (S)-S-oxide reductase [Fistulifera solaris]) HSP 1 Score: 179.5 bits (454), Expect = 1.900e-41 Identity = 137/390 (35.13%), Postives = 185/390 (47.44%), Query Frame = 0 Query: 9 LLLLTQAAVLLLLFPSALAFLRIPSSTPTSSTACRSFSLSNKALGAAVARAGNVLTVDLSITLE---------DGTDMPADFDMGKNVRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENA----PRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQC---------FATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKR--HDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNGQSARKNDPTPVRCYG 375 L L + + +L + A F + PS++ + +FS K A + G+++T+D + E DG + D + F LG G P +H V G+ ES V D +G +L A I A P ++ G ++ L NGL VT + FTID N P G + + L VE S F A A GCFWG EL R PGVVATA GYT APTY +VCSG TG EA+ V +D V+SY R++ + R + + GND GTQYR G+YY + EQ+++AE G++ E VTE PA F+ AE+YH QYL+K GQSARK D T +RCYG Sbjct: 4 LKLYSLSILLFITKGKAWIFPKTPSASTPRFASTETFSDEEKP--AIRIKEGSIVTIDCRLKPEGEYVPEPLIDGVVL-HDESPPARLTFALGRGNYLPGLHDLVQGLQVGESVN-GVSLDAGWGERRSDLVATIEFAQAAIDDPSQIQSGVELMLANGLKCVVT--KVTEKDFTIDANPPLAGATYEASVHLIRVEDGPSMTVFGETQTSRFQVATFALGCFWGGELTYMREPGVVATAVGYT-----------QGQRVAPTYEDVCSGTTGHTEAIAVTYDPDVVSYQRLVHLAMDRLGENKYLKNQVGNDRGTQYRHGVYYHTPEQKQIAE------AIIGDFGEDCVTECLPAGKFWLAEDYHQQYLLKGGQSARKGDDTTIRCYG 370
BLAST of NO01G00420 vs. NCBI_GenBank
Match: XP_002985137.2 (peptide methionine sulfoxide reductase A1 [Selaginella moellendorffii]) HSP 1 Score: 177.6 bits (449), Expect = 7.400e-41 Identity = 90/180 (50.00%), Postives = 116/180 (64.44%), Query Frame = 0 Query: 200 ATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNG-----QSARKNDPTPVRCYG 375 A A AAGCFW +ELA QR+PGV+ T GYT +PTY +VC+G+TG EAV V +D + +SY +L+ FWK+HDPTQADGQGNDIG+QYR GIY+ + EQ K+A++S + + + IVTE+ PA TF+ AE+YH QYL K G QSA K P+RCYG Sbjct: 4 AMATFAAGCFWSVELAFQRIPGVIKTTVGYT-----------QGSKESPTYHDVCTGRTGHAEAVLVEYDPKEVSYTALLDAFWKKHDPTQADGQGNDIGSQYRSGIYFHTPEQEKLAKQSLEQEQQ--RLGKKIVTELLPATTFYPAEDYHQQYLEKGGRGGRKQSAAKGCTDPIRCYG 170
BLAST of NO01G00420 vs. NCBI_GenBank
Match: XP_002969802.2 (peptide methionine sulfoxide reductase A1 [Selaginella moellendorffii]) HSP 1 Score: 176.8 bits (447), Expect = 1.300e-40 Identity = 89/180 (49.44%), Postives = 116/180 (64.44%), Query Frame = 0 Query: 200 ATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNG-----QSARKNDPTPVRCYG 375 A A AAGCFW +ELA QR+PGV+ T GYT +PTY +VC+G+TG EAV V +D + +SY +L+ FWK+HDPTQADGQGND+G+QYR GIY+ + EQ K+A++S + + + IVTE+ PA TF+ AE+YH QYL K G QSA K P+RCYG Sbjct: 2 AMATFAAGCFWSVELAFQRIPGVIKTTVGYT-----------QGSKESPTYHDVCTGRTGHAEAVLVEYDPKEVSYTALLDAFWKKHDPTQADGQGNDLGSQYRSGIYFHTPEQEKLAKQSLEQEQQ--RLGKKIVTELLPATTFYPAEDYHQQYLEKGGRGGRKQSAAKGCTDPIRCYG 168
BLAST of NO01G00420 vs. NCBI_GenBank
Match: EFJ13631.1 (hypothetical protein SELMODRAFT_121679 [Selaginella moellendorffii]) HSP 1 Score: 176.4 bits (446), Expect = 1.600e-40 Identity = 89/178 (50.00%), Postives = 115/178 (64.61%), Query Frame = 0 Query: 202 AHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNG-----QSARKNDPTPVRCYG 375 A AAGCFW +ELA QR+PGV+ T GYT +PTY +VC+G+TG EAV V +D + +SY +L+ FWK+HDPTQADGQGNDIG+QYR GIY+ + EQ K+A++S + + + IVTE+ PA TF+ AE+YH QYL K G QSA K P+RCYG Sbjct: 2 ATFAAGCFWSVELAFQRIPGVIKTTVGYT-----------QGSKESPTYHDVCTGRTGHAEAVLVEYDPKEVSYTALLDAFWKKHDPTQADGQGNDIGSQYRSGIYFHTPEQEKLAKQSLEQEQQ--RLGKKIVTELLPATTFYPAEDYHQQYLEKGGRGGRKQSAAKGCTDPIRCYG 166
BLAST of NO01G00420 vs. NCBI_GenBank
Match: CBN74459.1 (Peptide methionine sulfoxide reductase [Ectocarpus siliculosus]) HSP 1 Score: 176.0 bits (445), Expect = 2.200e-40 Identity = 89/174 (51.15%), Postives = 111/174 (63.79%), Query Frame = 0 Query: 201 TAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNGQSARKNDPTPVRCYG 375 T AAGCFW +ELA QR+PGV+ T GYT PTY EVCSG TG EA+ V FD RV+ Y+ +L V W + DPT + QGND GTQYR GIYYTS EQ+++A SKA +A + D+PIVTEI A F++AE+YH +YL K GQ + K D + +RCYG Sbjct: 32 TGIFAAGCFWSVELAYQRVPGVLETEVGYTDGHKKD-----------PTYQEVCSGSTGHTEALRVKFDPRVVKYNELLTVLWDKIDPTTLNRQGNDSGTQYRSGIYYTSAEQKEIALASKAAEQA--KLDKPIVTEIKEATEFYRAEDYHQKYLEKGGQCSLKGDTSNIRCYG 192
BLAST of NO01G00420 vs. NCBI_GenBank
Match: PNH10940.1 (Peptide methionine sulfoxide reductase [Tetrabaena socialis]) HSP 1 Score: 176.0 bits (445), Expect = 2.200e-40 Identity = 96/225 (42.67%), Postives = 129/225 (57.33%), Query Frame = 0 Query: 155 LTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNGQSARKNDP-----TPVRCYG 375 + A VT+ D K T +D NH G++LT ++L++ S+ A A AGCFWG ELA R+PGV++T GYT P+Y EVCSG TG E V+V++D +SY R+LE FW RH+PTQ + QGND+GTQYR GI+ + Q + A +SKA + G+ EP+VT + + AE YH QYL K G+ R DP P+RCYG Sbjct: 1 MAALVTSID--KETIKLDLNHELAGKALTF--DVELMKLVPSERMARATFGAGCFWGPELAFMRVPGVLSTEVGYTNGETEN-----------PSYEEVCSGTTGHAEVVQVVYDPEEVSYERLLEEFWARHNPTQLNRQGNDVGTQYRSGIFTHTPAQLEAAMKSKAAQQ--GKSKEPVVTVVEELANYTSAEPYHQQYLAKGGRGGRPQDPRKGCTDPIRCYG 208 The following BLAST results are available for this feature:
BLAST of NO01G00420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00420 ID=NO01G00420|Name=NO01G00420|organism=Nannochloropsis oceanica|type=gene|length=2109bpback to top protein sequence of NO01G00420.1 >NO01G00420.1-protein ID=NO01G00420.1-protein|Name=NO01G00420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=375bpback to top Synonyms
Publications
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