NO01G00420, NO01G00420 (gene) Nannochloropsis oceanica

Overview
NameNO01G00420
Unique NameNO01G00420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2109
Alignment locationchr1:112259..114367 +

Link to JBrowse

Properties
Property NameValue
DescriptionPeptidylprolyl isomerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:112259..114367 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008113peptide-methionine (S)-S-oxide reductase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036509Met_Sox_Rdtase_MsrA_sf
IPR002569Met_Sox_Rdtase_MsrA
IPR001179PPIase_FKBP_dom
Homology
BLAST of NO01G00420 vs. NCBI_GenBank
Match: EWM28968.1 (peptide methionine sulfoxide reductase [Nannochloropsis gaditana] >EWM28969.1 peptide methionine sulfoxide reductase [Nannochloropsis gaditana])

HSP 1 Score: 414.1 bits (1063), Expect = 4.700e-112
Identity = 215/334 (64.37%), Postives = 255/334 (76.35%), Query Frame = 0
Query:   16 AVLLLLFPS-ALAFLRIPSSTPTSSTACRSFSLSNKALGAAVARAGNVLTVDLSITLEDGTDMPADFDMGKNVRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAE 349
            AV ++L P+   AF R     P++    RSFSL+ + L  A A  G+V T+DLSI LEDGT MPADFD G  VRFRLG GGLPP++H+AV+GM  +E +T +VPPDEAYG YYPELAA+IPAEN P G+KVGDKVKLTNGLTARVT  D  +  F++DGNHP  GR+L+L+  L  +  A+S CFAT HLAAGCFWGLELA QRLPGVVATAAGYT                APTYSEVCSG+TG+VEAVEVLFD+ V+S+ +ILEVFW RHDPTQ +GQGND+GTQYRGGIYYTS+ Q++ AEESKAR+EASG YD+PIVTEI PAD F+ AE
Sbjct:   14 AVAIILLPTYGFAFFRNGPFVPSTP---RSFSLATR-LSTAKATPGDVATIDLSIMLEDGTAMPADFDTGSQVRFRLGRGGLPPYVHAAVEGMHVQERRTRLVPPDEAYGPYYPELAADIPAENTPPGMKVGDKVKLTNGLTARVTRHDPAQGLFSLDGNHPFAGRTLSLSLLLHDLMPADSPCFATVHLAAGCFWGLELAFQRLPGVVATAAGYT----QGGNEGEGEERRAPTYSEVCSGRTGYVEAVEVLFDEGVVSFEKILEVFWNRHDPTQLNGQGNDLGTQYRGGIYYTSDAQKRAAEESKARLEASGLYDKPIVTEILPADIFYTAE 339          
BLAST of NO01G00420 vs. NCBI_GenBank
Match: XP_005855956.1 (peptide methionine sulfoxide reductase, partial [Nannochloropsis gaditana CCMP526] >EKU20399.1 peptide methionine sulfoxide reductase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 340.5 bits (872), Expect = 6.600e-90
Identity = 175/279 (62.72%), Postives = 208/279 (74.55%), Query Frame = 0
Query:   25 ALAFLRIPSSTPTSSTACRSFSLSNKALGAAVARAGNVLTVDLSITLEDGTDMPADFDMGKNVRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYR 304
            + AF R     P++    RSFSL+ + L  A A  G+V T+DLSI LEDGT MPADFD G  VRFRLG GGLPP++H+AV+GM  +E +T  VPPDEAYG YYPELAA+IPAEN P G+KVGDKVKLTNGLTARVT  D  +  F++DGNHP  GR+L+L+  L  +  A+S CFAT HLAAGCFWGLELA QRLPGVVATAAGYT                APTYSEVCSG+TG+VEAVEVLFD+ V+S+ +ILEVFW RHDPTQ +GQGND+G ++R
Sbjct:    2 SFAFFRNGPFVPSTP---RSFSLATR-LSIAKATPGDVATIDLSIMLEDGTAMPADFDTGSQVRFRLGRGGLPPYVHAAVEGMHVQERRTRSVPPDEAYGPYYPELAADIPAENTPPGMKVGDKVKLTNGLTARVTRHDPAQGLFSLDGNHPFAGRTLSLSLLLHDLMPADSPCFATVHLAAGCFWGLELAFQRLPGVVATAAGYT----QGGNEGEGEERRAPTYSEVCSGRTGYVEAVEVLFDEGVVSFEKILEVFWNRHDPTQLNGQGNDLGWKHR 272          
BLAST of NO01G00420 vs. NCBI_GenBank
Match: CBJ30284.1 (peptide methionine sulfoxide reductase [Ectocarpus siliculosus])

HSP 1 Score: 240.7 bits (613), Expect = 7.100e-60
Identity = 139/320 (43.44%), Postives = 180/320 (56.25%), Query Frame = 0
Query:   55 AVARAGNVLTVDLSITLEDGTDMPADFDMGKNVRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNGQSARKNDPTPVRCYG 375
            ++   G+V  V+ S+  EDG+     FD G+ V+  +G GG  PF+H+AV  M   E K V VPP +A+G Y PEL A +  ++AP  + VG  ++L  G  A VT  +    +F ID N    G SL +   +     AES    TA  A GCFWGLELA QR  GVV+T AGY                  PTYSEVCSGKTG  EAV+VL+D     Y  +L +F+ RHDPTQ +GQGND GTQYR G+Y+  E+Q+ VAE+  A  E S    + + TE+     F+ AE+ H QYL K GQ ARK     +RCYG
Sbjct:   28 SMVAVGDVAGVEYSLRTEDGSPFETRFDQGR-VKLVVGGGGFAPFLHNAVLKMEPGEEKEVTVPPKDAFGEYDPELTATLGMDSAPGDISVGTVLQLWTGQKATVT--EMSGESFKIDWNPDLAGTSLVMDVKVLEAAKAES-VLKTATFAGGCFWGLELAFQRAKGVVSTKAGYAQGVVKN-----------PTYSEVCSGKTGHTEAVQVLYDPSETKYADLLTIFFGRHDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEKFFAD-EISARRLKKLATELEEVREFYDAEDEHQQYLQKGGQDARKEATETIRCYG 331          
BLAST of NO01G00420 vs. NCBI_GenBank
Match: PSC68949.1 (peptide methionine sulfoxide reductase [Micractinium conductrix])

HSP 1 Score: 235.7 bits (600), Expect = 2.300e-58
Identity = 133/320 (41.56%), Postives = 178/320 (55.62%), Query Frame = 0
Query:   60 GNVLTVDLSITLEDGTDMPADFDMGKNVRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNG-----QSARKNDPTPVRCYG 375
            G+ + ++  I+ +DGT + +    G+  RF +G        H A  G+   E +  VV  D+AYG    EL  E+P   AP GL  G  V+L+NG+ A V   D  +   TID NHP  G+ LT    ++L     +    TA   AGCFW +ELA QR+PGVV TA GY+                 PTY EVC+G TG  E V+V+++   +SY+++LEVFW +HDPT  + QG D+GTQYR GIYYT++EQR+ AE SKA    + +    +VTEI P   +  AEEYH QYL K G     QSA K    P+RCYG
Sbjct: 1155 GDYVELEYKISTDDGTVVDSSEAAGELARFVMGGSRAVAGFHQAAGGLAVGEGRAFVVGADDAYGMRNEELVVEVPRSAAPAGLDKGQVVQLSNGMQAVVV--DVDEEGVTIDANHPLAGKDLTF--DVKLARCIPAAQLETAVFGAGCFWSVELAYQRVPGVVQTAVGYSQGGAKN-----------PTYQEVCTGTTGHNEVVQVVYEPAQVSYNKLLEVFWGKHDPTTLNRQGGDVGTQYRSGIYYTTKEQREAAEASKA--AQNEKLGGNVVTEIEPVRNYSYAEEYHQQYLAKGGRNGQAQSAAKGCTDPIRCYG 1457          
BLAST of NO01G00420 vs. NCBI_GenBank
Match: PRW50853.1 (peptide methionine sulfoxide reductase [Chlorella sorokiniana])

HSP 1 Score: 232.3 bits (591), Expect = 2.500e-57
Identity = 131/296 (44.26%), Postives = 170/296 (57.43%), Query Frame = 0
Query:   84 GKNVRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMK-----NGQSARKNDPTPVRCYG 375
            GK  +F LG   L P  H AV G+   ES+  +V PD+AYG    E+ A+IP   AP GL VG  V+L+NG+ A V+A D   ++ TID NHP  G+ LT    +  +  A     AT    AGCFWG ELA QR+PGVV TA GY+                 P+Y +VCSG TG  E V+V+FD   +SY ++L+VFW RHDPT  + QG D+GTQYR GIY  + EQ+  AE SKA    + +    +VTEI   + F+ AEE+H +YL +      GQSA K    P+RCYG
Sbjct:  104 GKQAQFILGSENLVPGFHQAVGGLKVGESRQWLVRPDDAYGERRDEMMAQIPRSQAPEGLTVGQVVQLSNGMPAVVSAMD--DSSITIDANHPLAGKELTFDVEVTRIIPASRLQKAT--FGAGCFWGPELAFQRVPGVVQTAVGYSQGHAKN-----------PSYQDVCSGTTGHAEVVQVVFDPSEVSYEQLLDVFWARHDPTTLNRQGGDVGTQYRSGIYCHTPEQKAAAEASKA--AQNEKLGGQVVTEIEEINNFYVAEEFHQKYLERGGRFGQGQSAEKGCNDPIRCYG 382          
BLAST of NO01G00420 vs. NCBI_GenBank
Match: PNW88051.1 (hypothetical protein CHLRE_01g012150v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 227.3 bits (578), Expect = 8.100e-56
Identity = 130/325 (40.00%), Postives = 185/325 (56.92%), Query Frame = 0
Query:   55 AVARAGNVLTVDLSITLEDGTDMPADFDMGKNVRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNG-----QSARKNDPTPVRCYG 375
            A A++G+ + V  + TL+DG+   +  +  + + F +G G +     +AV G+VE   +   + P EAYG   P     +P   AP GL+ G KV+L+NG+ A V   D  K + T+D NH   G++LT    ++L++   S+    A  AAGCFWG ELA QR+PGV++T  GY+                 PTY EVC G TG  E V+VL+D   +SY R+LE FW RH+PTQ + QGND+GTQYR  I+  + EQ + A +SKA  +A  ++ +PIVT + P + +  AE YH QYL + G     QSA K    P+RCYG
Sbjct:   31 AGAKSGDYVQVHYTGTLDDGSVFDSSRER-EPLDFIIGAGKVIKGFDTAVSGLVEGGKRKQRIEPKEAYGEKDPNAVISVPISQAPAGLEAGMKVQLSNGMVAAVAKVD--KESVTLDLNHELAGQALTF--DVELMKLVPSERLQKATFAAGCFWGPELAFQRVPGVLSTEVGYSNGEAKD-----------PTYEEVCEGTTGHAEVVQVLYDPADVSYDRLLEEFWGRHNPTQLNRQGNDVGTQYRSAIFTHTPEQLEAANKSKAAFQA--KFKDPIVTVVEPINNYHSAEPYHQQYLARGGRFGRPQSANKGCDDPIRCYG 337          
BLAST of NO01G00420 vs. NCBI_GenBank
Match: GAX77071.1 (hypothetical protein CEUSTIGMA_g4517.t1 [Chlamydomonas eustigma])

HSP 1 Score: 222.2 bits (565), Expect = 2.600e-54
Identity = 127/326 (38.96%), Postives = 183/326 (56.13%), Query Frame = 0
Query:   57 ARAGNVLTVDLSITLEDGTDMPADFDMGKN---VRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNGQSARKNDPT-----PVRCYG 375
            A  G+ + V  + TL+DG    + FD  +    + F +G G +     +AV G+    ++   + P +AYG   P L    PA +AP GLK G KV+L+NG+ A V   D  K   T+D NH   G++LT    ++L+E  ++   A A   AGCFW +ELA QR PGV++T  GY                  PTY +VCSG+TG  E V+V++D   +SY ++L+VFW +HDPT  + QG D+GTQYR GIY  + EQR+VA +S    +A  ++  PIVTEI+    +  AE+YH QYL K G++    +P+     P+RCYG
Sbjct:   38 AGPGDSVKVHYTGTLDDG----SVFDSSRQREPLEFIIGAGSVIKGFDTAVTGLAVGGTRKSRISPADAYGEKDPSLQMSFPASSAPEGLKEGVKVQLSNGMVATVLKAD--KENITLDLNHELAGQALTF--DVELMELTQASKMARATFGAGCFWSVELAYQRTPGVISTEVGYCNGSVDN-----------PTYEQVCSGRTGHAEVVQVVYDPGQVSYEKLLDVFWGKHDPTTLNRQGGDVGTQYRSGIYCHTPEQREVAMKSLKAAQA--KFSAPIVTEIAEVSKYTAAEDYHQQYLAKGGRNGNPQNPSKGCTDPIRCYG 342          
BLAST of NO01G00420 vs. NCBI_GenBank
Match: XP_005650791.1 (PMSR-domain-containing protein [Coccomyxa subellipsoidea C-169] >EIE26247.1 PMSR-domain-containing protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 219.9 bits (559), Expect = 1.300e-53
Identity = 125/312 (40.06%), Postives = 177/312 (56.73%), Query Frame = 0
Query:   70 TLEDGTDMPADFDMGKNVRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRG--LKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNGQSARKNDPT-----PVRCYG 375
            TL+DGT   +  +  + + F +G G +      AV G+ + E +   VPP+ AYG +  EL   IP    P G   K GD V+L+NG +A V  ++   +  T+D N P  G++LT    ++LV+  ++     A  AAGCFWG EL  QR+PGVVAT  GY+                 PTY +VCSG TG  EAV+V +D  ++SY  +LE FWK+ DPTQ +GQG D GTQYR GIY  +EEQ ++AE SK+++  + +    I TE+     ++ AE+YH +YL K G+  R  DP+     P+RCYG
Sbjct:    8 TLDDGTVFDSSHER-EPLGFIVGSGKVIRGFDDAVIGLSKGERRKERVPPENAYGEWRSELTTSIPTSQLPEGASFKAGDNVRLSNGASAVV--KEMTSDALTLDFNPPMAGKALTF--EVELVKLTKASHLHKATFAAGCFWGPELMFQRIPGVVATEVGYSQGQTEN-----------PTYEDVCSGDTGHTEAVQVTYDSGLVSYEDLLEAFWKQIDPTQVNGQGGDRGTQYRTGIYAHNEEQLQIAEASKSKI--AEDLKAAIATEVEEVQNYWAAEDYHQEYLAKGGRFGRPQDPSKGCDDPIRCYG 301          
BLAST of NO01G00420 vs. NCBI_GenBank
Match: XP_001689879.1 (peptide methionine sulfoxide reductase [Chlamydomonas reinhardtii])

HSP 1 Score: 217.2 bits (552), Expect = 8.400e-53
Identity = 127/320 (39.69%), Postives = 181/320 (56.56%), Query Frame = 0
Query:   55 AVARAGNVLTVDLSITLEDGTDMPADFDMGKNVRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNG-----QSARKNDPTP 370
            A A++G+ + V  + TL+DG+   +  +  + + F +G G +     +AV G+VE   +   + P EAYG   P     +P   AP GL+ G KV+L+NG+ A V   D  K + T+D NH   G++LT    ++L++   S+    A  AAGCFWG ELA QR+PGV++T  GY+                 PTY EVC G TG  E V+VL+D   +SY R+LE FW RH+PTQ + QGND+GTQYR  I+  + EQ + A +SKA  +A  ++ +PIVT + P + +  AE YH QYL + G     QSA K   TP
Sbjct:   31 AGAKSGDYVQVHYTGTLDDGSVFDSSRER-EPLDFIIGAGKVIKGFDTAVSGLVEGGKRKQRIEPKEAYGEKDPNAVISVPISQAPAGLEAGMKVQLSNGMVAAVAKVD--KESVTLDLNHELAGQALTF--DVELMKLVPSERLQKATFAAGCFWGPELAFQRVPGVLSTEVGYSNGEAKD-----------PTYEEVCEGTTGHAEVVQVLYDPADVSYDRLLEEFWGRHNPTQLNRQGNDVGTQYRSAIFTHTPEQLEAANKSKAAFQA--KFKDPIVTVVEPINNYHSAEPYHQQYLARGGRFGRPQSANKAATTP 332          
BLAST of NO01G00420 vs. NCBI_GenBank
Match: XP_002958724.1 (hypothetical protein VOLCADRAFT_109463 [Volvox carteri f. nagariensis] >EFJ40180.1 hypothetical protein VOLCADRAFT_109463 [Volvox carteri f. nagariensis])

HSP 1 Score: 214.2 bits (544), Expect = 7.100e-52
Identity = 132/356 (37.08%), Postives = 193/356 (54.21%), Query Frame = 0
Query:   25 ALAFLRIPSSTPTSSTACRSFSLSNKALGAAVARAGNVLTVDLSITLEDGTDMPADFDMGKN-VRFRLGHGGLPPFMHSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRGLKVGDKVKLTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFATAHLAAGCFWGLELAMQRLPGVVATAAGYTXXXXXXXXXXXXXXXXAPTYSEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGTQYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEYHLQYLMKNG-----QSARKNDPTPVRCYG 375
            A+  LR+  + P  S+  R    ++     A+A+ G+   V  + TL+DG+    D   G++ + F +G G +      AV G+    ++   + P EAYG   P      P   AP GL+ G KV+L+NG+ A V + D  K   T+D NH   G+ LT    ++L++   S+    A  AAGCFWG ELA QR+PGV++T  GY+                 PTY +VC G TG  E V+V++D    SY R+LE FW RH+PTQ + QGND+GTQYR  I+  + EQ + A +SK  ++A  ++ EPIVT++ P + +  AE YH QYL + G     Q++ K    P+RCYG
Sbjct:    2 AMQSLRLAKARPLFSSGRRG---ASTFCTRAIAKQGDYCQVHYTGTLDDGSVF--DSSRGRDPLEFVIGAGKVIKGFDLAVTGLAVGGTRKQRIEPAEAYGEADPNAVISFPISQAPDGLEPGVKVQLSNGMIATVKSVD--KEKVTLDLNHELAGKPLTF--DVELMKLVPSERLQRATFAAGCFWGPELAFQRVPGVLSTEVGYSNGKTEN-----------PTYEDVCGGDTGHAEVVQVMYDPEEASYERLLEEFWARHNPTQLNRQGNDVGTQYRSAIFTHTAEQLEAALKSKEVIQA--KFKEPIVTQVEPIENYHPAEPYHQQYLARGGRFGRPQNSAKGCNDPIRCYG 335          
The following BLAST results are available for this feature:
BLAST of NO01G00420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28968.14.700e-11264.37peptide methionine sulfoxide reductase [Nannochlor... [more]
XP_005855956.16.600e-9062.72peptide methionine sulfoxide reductase, partial [N... [more]
CBJ30284.17.100e-6043.44peptide methionine sulfoxide reductase [Ectocarpus... [more]
PSC68949.12.300e-5841.56peptide methionine sulfoxide reductase [Micractini... [more]
PRW50853.12.500e-5744.26peptide methionine sulfoxide reductase [Chlorella ... [more]
PNW88051.18.100e-5640.00hypothetical protein CHLRE_01g012150v5 [Chlamydomo... [more]
GAX77071.12.600e-5438.96hypothetical protein CEUSTIGMA_g4517.t1 [Chlamydom... [more]
XP_005650791.11.300e-5340.06PMSR-domain-containing protein [Coccomyxa subellip... [more]
XP_001689879.18.400e-5339.69peptide methionine sulfoxide reductase [Chlamydomo... [more]
XP_002958724.17.100e-5237.08hypothetical protein VOLCADRAFT_109463 [Volvox car... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008346NSK008346Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00420.1NO01G00420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|227803gene_19Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100918g2gene1643Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00420.1NO01G00420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00420 ID=NO01G00420|Name=NO01G00420|organism=Nannochloropsis oceanica|type=gene|length=2109bp
ATGCCTCCATCCACCCCCCAACACCTCCTACTTCTGACCCAGGCCGCTGT
TCTTCTCCTACTCTTTCCCTCGGCCTTAGCCTTTCTTCGTATCCCTTCCT
CCACCCCTACCTCGTCCACCGCATGCCGCTCCTTTTCTTTGTCTAATAAA
GCCCTAGGTGCCGCCGTTGCCCGTGCAGGCAACGTGTTGACGGTCGACCT
TTCCATCACTTTGGAGGATGGAACCGACATGCCTGCTGACTTTGACATGG
GAAAGAACGTCCGTTTCCGGCTGGGCCACGGCGGACTCCCCCCCTTTATG
CACTCGGCCGTGGACGGCATGGTGGAGAAGGAGAGCAAAACGGTTGTAGT
GCCACCTGACGAGGCTTATGGAGCTTATTACCCCGAGCTGGCTGCTGAGA
TTCCGGCTGAAAATGCGCCCAGAGGGTTAAAAGTGGGGGATAAGgtacgc
aggagggaagaccaaggtgaaaaggaagaggtgtgggagccatgctcgta
aactctcaccctccacccaccatggccagGTCAAACTCACCAATGGCCTC
ACCGCGCGGGTCACAGCCCAAGACACGGGGAAGAACACGTTCACCATCGA
CGGTAACCACCCTTGCGGTGGGCGCTCCCTGACTCTCGCTACTACCCTCC
AACTTGTCGAGTCGGCCGAGAGCCAGTGTTTTGCAACGGCCCATTTGGCT
GCCGGTTGCTTCTGGGGGCTAGAGCTGGCCATGCAACGTCTTCCGGGTGT
GGTGGCGACGGCGGCAGGGTACACGCAAGGAGGGAAGAGGGGGGGTAGGG
AGGGAGGGATGGAAGGAGGGAGGGCACCGACTTACAGTGAAGTGTGCTCT
GGAAAAACGGGCTTTGTGGAGGCAGTGGAGGTGCTATTCGATCAGAGGGT
GATCTCCTACCACAGAATTTTGGAGgtgagggaggaaaggaggaagggaa
gaagggatgggaaagggagagagagaggacgggagggagggtgaagtggt
gggatacattgtttggtttcgtggacacaatccagtcaccggcccatgtc
gtctcctacctgccccttcttcctcttctcttttcctgcgttttaatcgt
cgttggtcacagGTGTTTTGGAAACGGCATGATCCCACCCAGGCGGATGG
CCAGGGGAATGACATTGgtaagggaggactagaaaaaaagagggagggag
ggagggagggagggggggaagcaagagcttccctttagccttgcctttcc
tattagctgcatattcccttttccttcacattccttcgtccccttcctct
ttcctccccgaccacagGCACCCAGTACAGGGGCGGCATCTACTACACTT
CGGAGGAGCAGAGGAAGGTGGCGGAGGAGAGCAAGGCTCGgtaagggagt
taagatgggaggggagagggaggagggagggagggaaggggaggggagga
cttgtagcgtctctcatatataaatgatgcataaatataaccacacagAG
TGGAGGCATCTGGAGAGTATGATGAGCCCATCGTTACAGAAATCTCGCCA
GCTGACACTTTCTTCAAGGCCGAGgtaaggggaaatgaggaagggaagga
gggaaggagggaaggagggaggaaattaggaccgtgagtttggctggaag
acggcatgcatttccaattctaacacttccataaccctcccccctccccc
cctcccttgtgccccctgctttacacacacgtacacccaccgtcttgtcg
tcattccccgctgctcgcttcagGAGTATCATCTGCAgtaagtttatgcg
ccctgcaccgtctttctctcatctcctaaccccctgtcttttccctcctc
ttcttccccccttccattgcttcctcactttccatggccgagtattatat
atatatattgtgataaatatgtgtgaaaaataattgattgtgataaaaag
atagaaaataactgaagaaggaaaataaactaacgaaaaaacaagttaag
taaaagctcacatgccccgcacacgcataaacccctcgcaagGTACTTGA
TGAAAAACGGCCAGTCCGCGCGAAAAAACGACCCGACCCCCGTCCGTTGC
TACGGTTAG
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protein sequence of NO01G00420.1

>NO01G00420.1-protein ID=NO01G00420.1-protein|Name=NO01G00420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=375bp
MPPSTPQHLLLLTQAAVLLLLFPSALAFLRIPSSTPTSSTACRSFSLSNK
ALGAAVARAGNVLTVDLSITLEDGTDMPADFDMGKNVRFRLGHGGLPPFM
HSAVDGMVEKESKTVVVPPDEAYGAYYPELAAEIPAENAPRGLKVGDKVK
LTNGLTARVTAQDTGKNTFTIDGNHPCGGRSLTLATTLQLVESAESQCFA
TAHLAAGCFWGLELAMQRLPGVVATAAGYTQGGKRGGREGGMEGGRAPTY
SEVCSGKTGFVEAVEVLFDQRVISYHRILEVFWKRHDPTQADGQGNDIGT
QYRGGIYYTSEEQRKVAEESKARVEASGEYDEPIVTEISPADTFFKAEEY
HLQYLMKNGQSARKNDPTPVRCYG*
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