NO01G00330, NO01G00330 (gene) Nannochloropsis oceanica

Overview
NameNO01G00330
Unique NameNO01G00330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2380
Alignment locationchr1:67868..70247 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:67868..70247 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G00330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00330.1NO01G00330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00330.1NO01G00330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00330 ID=NO01G00330|Name=NO01G00330|organism=Nannochloropsis oceanica|type=gene|length=2380bp
GAGTGCTGGCGAGAAAACTTGAGACATTATCACCACAAAACTTCACGCAT
ACACCCACGCATAGGGGGAATTTACGAAATCTACAGCGTAAGCCGCCTCT
ACTTCCCTATCCCACCACTATGACGATGATGGTCCTCGATTCCTGGTCAC
GCAAGgttcgtttgtcgttggtgcggatgctttttcctcttcctccctcc
accctcccttcctcccccccatctccttccccctcatcgaccctcatccc
cattaagccaccacgaagtatgaatgtacagttcattgcctttgtgagtg
gagaatcgtaggcctggtactcttgccaagccacggctacactccgcatt
tttcacttgtgcttggagacttccttacctcctcgccttcccggctgctg
cctcatccctttccctctcactctgccagCGCAAGTCCATCGCCACCGCC
CCTGCCATTGCCCCCTCGGTCTCCTCTCCCTCGGCCTCGGTCGACAGTTT
GATTGGCGATAACGAGGACCAGCAACAGCGCTTCGTGCTGACACCAATCT
CCCTGgtacgtggactccctttcgtctcccagtccctccctcccttcctc
cctctcaatctccttccctctctctcaatctccctccctccctctcaaat
ttccctcctccccacataacctttccccccctccccactcctctccttca
tcccaactcccccctcccctccttcttatttcatcatcgtcaccatccgt
ccaccacagGACACACGCGTCGAACCACGCACCCAAAAGCCTGCCTGTCC
TGTCGTCCTCCCACTTGACGGCGAGCTCCGTTTGACGAAGACGGACATTT
CCAAGgtagatatctctccttccctttctccctccttccctctctccctc
tatttctctctttcttctttcccatgcatcctcacttccctccctccctc
atttctaatgcgcctagatgccttatccttgcattcccattcttcctctg
ggcttcatcacacgaccatcgccattgccaatccctccctccctccctcc
ctccctccctccctccaccagGTGTTTGTCATCGATAAGGACCGCTTGGA
GTTCATCTCGCGGGAGCACCTTTGCTTCACCACCACAAGCGTCCTCCCTC
CCTCCTTTCCTCCCTCCATCCCTCCCTCCCTCCCGCCCGCCCGGCCGGCC
AAGAAGTTCAGGACCGCCTCGAGCAGCAACCCTTCCTCTCTCCCGCCCTC
CCCTCGTGTGGAGAGGGAGAATGAGGGGGAGGAGGAAGGGAGCGAGGAAG
GGACGGAGGTAGAGGAGGAGGGGATGCGGTCCACAGTCCGTGTCCTCGTC
CGCAGCCTTGCCACCAACCAGgtcagggagtgagggagggagagagggag
ggagggagggagtggggctgggaagatacagagcgtcgatttaaatatca
ttggaaaacactaaatagtcgtttgggcatgtactccctccttccctccc
ttcttccctccctcctcccgtccctccccccctcccagGTGTCCATCCGT
CGTTCAGTGTACGCGGAATGGGCCTCAGGAGGTAGGGAGGAGGCTTACGG
CCTAGTGCTGATGAAGAAGGGGGATGAGACGGAGCTCTTCCCAGGGGACC
ATCTGCAGgtagggacggagggtgggagggagggagggagggagggaggg
aggaaggatacggactggtgctgaattgttttggtggagtgtcttgaaga
gacgcaagcacacacacacaaacacacacacactctctctctctttgtct
ccctctctctctttgtctctctctctctctctctctctctctctctctct
ctctctctctctctcccacacacacagCTCCTCAACCCTCCGTTTGACCG
GCTCGGGTGCCACTCGCTCACCTTGCAGCTGGCCGCCGCCCCTCCCCCCT
CACCCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCGGCTCCTCC
CACAACAATTCCAACGCCCGCCGCGCCACCTTGACTGCAGCGGCTCCTGT
TCCTGCTCCTGCTGTTGCAACCGCTGCTGCTGCTGTCCGTCCCTCCCTCC
ATTCCTCCCTGCTCTCCCCTCCCCCCCTCAGCCTCGAAGCGACTTTTGCA
TCGCCGGCTTGTGTCACGGGCGCAGCAAGGGAGGGAGGGACGATGGCCCT
CCCGCACCTGGACAGGGGGAAAGGGAGTGGGGAGGAGGAGGAGGGAGGGA
GAGAGGGAACGACGGGAAGGGGGGGGGCATTCGCAGGGTGCTCGGCGGAT
TATTTTCGCCGTGGTCCCTCTTGATGGCGGGAAGGAAGAAGGGAAAGGGC
GGGCGGGAGGAAGGGAGGAAGGGAGAGGGG
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protein sequence of NO01G00330.1

>NO01G00330.1-protein ID=NO01G00330.1-protein|Name=NO01G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=375bp
MTMMVLDSWSRKRKSIATAPAIAPSVSSPSASVDSLIGDNEDQQQRFVLT
PISLDTRVEPRTQKPACPVVLPLDGELRLTKTDISKVFVIDKDRLEFISR
EHLCFTTTSVLPPSFPPSIPPSLPPARPAKKFRTASSSNPSSLPPSPRVE
RENEGEEEGSEEGTEVEEEGMRSTVRVLVRSLATNQVSIRRSVYAEWASG
GREEAYGLVLMKKGDETELFPGDHLQLLNPPFDRLGCHSLTLQLAAAPPP
SPPSSLPSSLPSSLGSSHNNSNARRATLTAAAPVPAPAVATAAAAVRPSL
HSSLLSPPPLSLEATFASPACVTGAAREGGTMALPHLDRGKGSGEEEEGG
REGTTGRGGAFAGCSADYFRRGPS*
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Synonyms
Publications