NO01G00270, NO01G00270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00270 vs. NCBI_GenBank
Match: OAE25387.1 (hypothetical protein AXG93_4620s2020 [Marchantia polymorpha subsp. ruderalis] >PTQ41012.1 hypothetical protein MARPO_0036s0019 [Marchantia polymorpha]) HSP 1 Score: 166.8 bits (421), Expect = 1.400e-37 Identity = 105/287 (36.59%), Postives = 161/287 (56.10%), Query Frame = 0 Query: 129 AAACAKLLLQPFDTVKTLQQANK----GSLGMFEAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQA----VKKALLQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKA--------GGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQP----GLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLL 396 A+ C+K++LQPFDT KT+ QA K G + + L RG +LYTG ++ S P+ +++ Y+ V+KA + P L L +A GN ASV RVP E++KQR+QAG+Y + EA +++ EG G + G + + RD+PY+ + +T+E L++ R R K+ G G ++ D MGA AG V S ++ P+DVVKTRVMTQ +YP + + V+ +W +EG F +G +PR+L+KVPA+A+F YE + +L Sbjct: 27 ASLCSKVILQPFDTSKTVLQATKELRGGYTNLAQCMVGLVRNRGFGALYTGFLASIAVSAPSSAVFAAGYEFSKAWVEKASHDSALPLL---QLAPVLAAAFGNVAASVVRVPPEIIKQRVQAGIYRNVFEATTSVWLKEGFTGFY---RGYTAMVARDIPYSALQFMTFEILKKRRLRTRFKSKQQGKPKNGEGMMT----DMWMGAIAGAVASTLTTPLDVVKTRVMTQTFAGRAVYPGLPATVKQIWIEEGLVGFGRGMLPRVLYKVPASAVFLVCYEAMKRIL 303
BLAST of NO01G00270 vs. NCBI_GenBank
Match: GAQ83294.1 (mitochondrial substrate carrier family protein [Klebsormidium nitens]) HSP 1 Score: 166.4 bits (420), Expect = 1.800e-37 Identity = 112/287 (39.02%), Postives = 157/287 (54.70%), Query Frame = 0 Query: 121 KNGCASGLAAACAKLLLQPFDTVKTLQQANKGSLGMF-EAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGG-------GKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQP----GLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLL 396 +N A A+ +KL+LQPFDT KT+ Q++ S F + A + +GV LY G G ++ S P+ +I+F Y+AVKK P TLG +G VP EVVKQR+QA +Y + A+R M RTE G+G F+ G+ Q+ RD+PYA + +T+E+L++A R + G + L + MGA AG V S+V+NPMDVVKTRVMTQ + V VR + EG AF G +PR++ KVPA+A+F YE + LL Sbjct: 3 ENFIAGASASFLSKLVLQPFDTTKTILQSSTNSYKTFTDCAVGVVKTQGVMGLYRGFGASIGTSAPSSAIFFATYEAVKKWTEAKFPKTLG--QVGPIVGXXXXXXXXXXXXVPPEVVKQRVQARVYPNMVVAIREMSRTE-GIGGFYTGYGI--QLARDIPYAAIQFMTFETLKKAYGVNRPQEAGAPKRPVTSEAKKVLTNLWMGAVAGLVASVVTNPMDVVKTRVMTQDLTQGAVKIGVRQTVRSILKHEGPLAFTYGMLPRVMLKVPASALFLVAYEGIKRLL 284
BLAST of NO01G00270 vs. NCBI_GenBank
Match: XP_024399995.1 (S-adenosylmethionine mitochondrial carrier protein-like isoform X2 [Physcomitrella patens] >PNR36019.1 hypothetical protein PHYPA_021869 [Physcomitrella patens]) HSP 1 Score: 160.6 bits (405), Expect = 1.000e-35 Identity = 105/287 (36.59%), Postives = 157/287 (54.70%), Query Frame = 0 Query: 122 NGCASGLAAACAKLLLQPFDTVKTLQQANKGSLGMF----EAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALP--PTLGWTLLGVA--ASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPL-EDSMMGAFAGGVGSLVSNPMDVVKTRVMTQ----PGLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLL 396 N A G A+ C+KL+LQP D KT+ QA+ G + + + G+ LYTG ++ S P+ +++ Y+ K A+ +A P TL +A VGN ASV RVP EV+KQR+QAG+Y +A R ++ TEG G + G S Q+ RD+PY+ + +T+E L++ + K S L D +GA AG V ++ P+DV KTRVMTQ P +Y + + ++ +W +EG A F +G VPR+L+KVPA+A+F YE + L Sbjct: 61 NLVAGGTASLCSKLVLQPLDIAKTILQASAEVRGSYSNLAQCLAGIVRDGGIPKLYTGFIASVAVSAPSSAVFVACYECSKNAIERASSSFPAPFQTLEDFVPLLAAAVGNVAASVVRVPPEVIKQRVQAGIYRDIFQATRAVWATEGLPGFYCGYS---MQVARDIPYSALQFMTFEYLKKRYSHRENLHMDQKNSKRLVHDLCIGALAGAVACTLTTPLDVAKTRVMTQNPSDPLVYMGLQATLQKIWLEEGIAGFGRGMVPRVLYKVPASAVFLVCYEAIKRFL 344
BLAST of NO01G00270 vs. NCBI_GenBank
Match: XP_024399994.1 (S-adenosylmethionine mitochondrial carrier protein-like isoform X1 [Physcomitrella patens]) HSP 1 Score: 160.6 bits (405), Expect = 1.000e-35 Identity = 105/287 (36.59%), Postives = 157/287 (54.70%), Query Frame = 0 Query: 122 NGCASGLAAACAKLLLQPFDTVKTLQQANKGSLGMF----EAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALP--PTLGWTLLGVA--ASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPL-EDSMMGAFAGGVGSLVSNPMDVVKTRVMTQ----PGLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLL 396 N A G A+ C+KL+LQP D KT+ QA+ G + + + G+ LYTG ++ S P+ +++ Y+ K A+ +A P TL +A VGN ASV RVP EV+KQR+QAG+Y +A R ++ TEG G + G S Q+ RD+PY+ + +T+E L++ + K S L D +GA AG V ++ P+DV KTRVMTQ P +Y + + ++ +W +EG A F +G VPR+L+KVPA+A+F YE + L Sbjct: 61 NLVAGGTASLCSKLVLQPLDIAKTILQASAEVRGSYSNLAQCLAGIVRDGGIPKLYTGFIASVAVSAPSSAVFVACYECSKNAIERASSSFPAPFQTLEDFVPLLAAAVGNVAASVVRVPPEVIKQRVQAGIYRDIFQATRAVWATEGLPGFYCGYS---MQVARDIPYSALQFMTFEYLKKRYSHRENLHMDQKNSKRLVHDLCIGALAGAVACTLTTPLDVAKTRVMTQNPSDPLVYMGLQATLQKIWLEEGIAGFGRGMVPRVLYKVPASAVFLVCYEAIKRFL 344
BLAST of NO01G00270 vs. NCBI_GenBank
Match: XP_005707898.1 (mitochondrial carrier (BOU / S-adenosylmethionine carrier) [Galdieria sulphuraria] >EME31378.1 mitochondrial carrier (BOU / S-adenosylmethionine carrier) [Galdieria sulphuraria]) HSP 1 Score: 154.1 bits (388), Expect = 9.400e-34 Identity = 100/286 (34.97%), Postives = 153/286 (53.50%), Query Frame = 0 Query: 121 KNGCASGLAAACAKLLLQPFDTVKTLQQANKG---SLGMFEAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQ---ALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQPG-----LYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLL 396 +N +S LA K +LQP DT KT Q+++ + + D + +L+ GL +GSIPA S+Y Y++ K L+ LP +G+A SA +G+ VA RVP E +KQRLQ G+ STG+A+R +Y+T+G G + G +Q+ RDVPYAI+ LTYE+ + + R+ ++ GA AGGV S ++ P+DV+KTR+MT G Y V L +EG + +G PR+ +K+ ++A+FF ++E R L Sbjct: 24 ENFLSSALATMITKAILQPVDTCKTRAQSSRNLGFKVRFVDILVDALKKEKPIALFRGLPAAWLGSIPAQSLYISTYESCKYLFLEKTHLLPKN-----VGIALSAAIGDLVAGFIRVPPETIKQRLQTGLDLSTGKAIRRIYQTQGLKGFY---RGYLAQVSRDVPYAILLFLTYENAKLLFSEKRQ-------MRVRDNFFRGALAGGVASFLTTPLDVMKTRIMTHSGDVGISSYRFWLGTVHSLLREEGWRSLWRGAGPRVSYKICSSALFFVSFEFLRSTL 294
BLAST of NO01G00270 vs. NCBI_GenBank
Match: XP_011398430.1 (Putative mitochondrial carrier protein PET8 [Auxenochlorella protothecoides] >KFM25534.1 Putative mitochondrial carrier protein PET8 [Auxenochlorella protothecoides]) HSP 1 Score: 151.8 bits (382), Expect = 4.600e-33 Identity = 105/273 (38.46%), Postives = 144/273 (52.75%), Query Frame = 0 Query: 125 ASGLAAACA-KLLLQPFDTVKTLQQANKGSLGMFEAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQ--PGLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGL 395 A+G A CA + L P DT+KT QA + G+ R L G R LY GL LVG PA +I+ VY+ VK+ + +A+ W L A +SV RVP EVVK R+Q G +S+ ALRT+ EG G F +G +S ++RD+P+ + LTYE L++ A+A GG + P E S+ GA AG V L + P+DV+KTR+M G Y V R + DEG AA L+G PR++ +IFF E + L Sbjct: 49 AAGATAGCAVEAALYPLDTIKTRLQAMRSGGGL----RALVQAGGGRGLYAGLVGNLVGVAPASAIFMAVYEPVKQRVQKAVDADRAW--LAPLAGGVAAGLASSVVRVPTEVVKTRMQTGEFSNALRALRTIAAREGRRGVF---AGYSSFLLRDLPFDAIEFLTYEQLKKGYASA--VLGGRRELNPAEHSVAGAIAGAVTGLATTPLDVLKTRMMIDGGRGQYAGVADCARQILRDEGPAALLRGWQPRVIWIGVGGSIFFTVLEAAKKL 310
BLAST of NO01G00270 vs. NCBI_GenBank
Match: CEO96366.1 (hypothetical protein PBRA_005037 [Plasmodiophora brassicae]) HSP 1 Score: 151.0 bits (380), Expect = 7.900e-33 Identity = 98/272 (36.03%), Postives = 139/272 (51.10%), Query Frame = 0 Query: 120 LKNGCASGLAAACAKLLLQPFDTVKTLQQANKGSLGMFEAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQPG--LYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYE 390 L +G A G A A +L P DT+KT Q ARD+A RG Y+GL + GS P+ +++F VY + + P + L SA + N A RVP+EVVKQ+LQAGM+SST E ++++ R +G G + G S ++R+VP+ + +E+L+ GG+ TPLE MGA AG + + +NP+DVVKTR+MTQ +Y +R LWADEG KG R+ +FF YE Sbjct: 21 LVSGVAGGAAGAFTDFVLFPLDTLKTRVQ-----------ARDVA--RGSLKFYSGLASAMAGSFPSAAVFFAVYDTCRNKSYAMVAPQ--YHALASMGSASIANVAACAVRVPFEVVKQQLQAGMHSSTVECVKSIVRRDGVAGLY---RGYMSTVLREVPFDALQFALWETLK----VQYSNMEGGRTLTPLESGAMGAIAGSISAAATNPLDVVKTRLMTQGHKIVYNGFNDCIRKLWADEGLHGLTKGIFHRVAWIGLGGFLFFGAYE 270
BLAST of NO01G00270 vs. NCBI_GenBank
Match: XP_005854766.1 (s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana CCMP526] >XP_005855414.1 s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana CCMP526] >EKU20945.1 s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana CCMP526] >EKU21593.1 s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 149.1 bits (375), Expect = 3.000e-32 Identity = 103/282 (36.52%), Postives = 156/282 (55.32%), Query Frame = 0 Query: 117 IEGLKNGCASGLAAACAKLLLQPFDTVKTLQQANKGSLGMFEAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQ----PGLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGL 395 + GL +G +G+ L L P DT+KT QA+ + + + DL +R +Y G+G LV S PA + +FG Y + K+ L P L+ + A+AG G+ SV RVP+EVVKQR+QAG+ + EA+R + + G G F G S +A +RD+P+ I+ YE+L+ A + GGKL T E S+ G+ AGG+ + ++ P+DVVKTR+MTQ +Y + + + +EG A KG VPR+++ AIFF YE F+ + Sbjct: 154 LTGLLSGAVAGIT---VDLTLFPLDTIKTRLQASANT----KFSLDL-----LRGVYDGVGPGLVASAPACAAFFGAYDSFKRGLSARFPDPKCAPLVNMVAAAG-GDLTQSVVRVPFEVVKQRMQAGVERTWREAVRNIMASTGPRGFFAGWSALA---LRDLPFDIIEFPLYEALKDVWAERK----GGKLET-WESSVCGSLAGGIAAGLTTPLDVVKTRLMTQRRDSGQVYAGLLDCLVRVAREEGIGALYKGLVPRVVNIALGGAIFFGAYEAFKSV 414
BLAST of NO01G00270 vs. NCBI_GenBank
Match: EWM26453.1 (s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana]) HSP 1 Score: 149.1 bits (375), Expect = 3.000e-32 Identity = 103/282 (36.52%), Postives = 156/282 (55.32%), Query Frame = 0 Query: 117 IEGLKNGCASGLAAACAKLLLQPFDTVKTLQQANKGSLGMFEAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQ----PGLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGL 395 + GL +G +G+ L L P DT+KT QA+ + + + DL +R +Y G+G LV S PA + +FG Y + K+ L P L+ + A+AG G+ SV RVP+EVVKQR+QAG+ + EA+R + + G G F G S +A +RD+P+ I+ YE+L+ A + GGKL T E S+ G+ AGG+ + ++ P+DVVKTR+MTQ +Y + + + +EG A KG VPR+++ AIFF YE F+ + Sbjct: 122 LTGLLSGAVAGIT---VDLTLFPLDTIKTRLQASANT----KFSLDL-----LRGVYDGVGPGLVASAPACAAFFGAYDSFKRGLSARFPDPKCAPLVNMVAAAG-GDLTQSVVRVPFEVVKQRMQAGVERTWREAVRNIMASTGPRGFFAGWSALA---LRDLPFDIIEFPLYEALKDVWAERK----GGKLET-WESSVCGSLAGGIAAGLTTPLDVVKTRLMTQRRDSGQVYAGLLDCLVRVAREEGIGALYKGLVPRVVNIALGGAIFFGAYEAFKSV 382
BLAST of NO01G00270 vs. NCBI_GenBank
Match: KVH99573.1 (Mitochondrial carrier domain-containing protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 148.7 bits (374), Expect = 3.900e-32 Identity = 98/285 (34.39%), Postives = 155/285 (54.39%), Query Frame = 0 Query: 116 IIEGLKNGCASGLAAACAKLLLQPFDTVKTLQQANKGSLGMFEAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQ--PGLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLLRVQ 399 +++G G A+G+ + +L P DT+KT Q +G + ++ LY+GL L G +PA +I+ GVY+ K+ LL++ P L + L + VG +S+ RVP EVVKQR+Q G ++S +A+R + EG G F +G +S ++RD+P+ + YE LR A ++ LS P E++++GAFAG + V+ P+DV+KTR+M Q Y ++ V + +EGA+AFLKG PR+L +IFF E + LL + Sbjct: 45 LLDGAIAGAAAGVV---VESVLYPLDTIKTRLQTVRG-----------GGKIILKGLYSGLAGNLAGVLPASAIFIGVYEPTKQKLLKSFPENL--SALAHLTAGAVGGAASSIIRVPTEVVKQRMQTGHFASAPDAVRLIVAKEGFKGLF---AGYSSFLLRDLPFDAIQFCIYEQLRIGYKLAAKR----NLSDP-ENAVIGAFAGAITGAVTTPLDVIKTRLMVQGSSNQYTSISHCVGTILKEEGASAFLKGMGPRVLWIGIGGSIFFGVLEKTKQLLAAE 305 The following BLAST results are available for this feature:
BLAST of NO01G00270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00270 ID=NO01G00270|Name=NO01G00270|organism=Nannochloropsis oceanica|type=gene|length=1200bpback to top protein sequence of NO01G00270.1 >NO01G00270.1-protein ID=NO01G00270.1-protein|Name=NO01G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=400bpback to top Synonyms
Publications
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