NO01G00270, NO01G00270 (gene) Nannochloropsis oceanica

Overview
NameNO01G00270
Unique NameNO01G00270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1200
Alignment locationchr1:46416..47615 -

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial carrier
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:46416..47615 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
IPR002067Mit_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
[Close]
BLAST of NO01G00270 vs. NCBI_GenBank
Match: XP_005855576.1 (mitochondrial carrier [Nannochloropsis gaditana CCMP526] >EKU20791.1 mitochondrial carrier [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 487.3 bits (1253), Expect = 4.700e-134
Identity = 250/295 (84.75%), Postives = 269/295 (91.19%), Query Frame = 0 
Query:  110 DAGWATIIEGLKNGCASGLAAACAKLLLQPFDTVKTLQQANKGSLGMFEAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAAR-----RKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLLRVQG 400
            +AGWAT++EGLKNGCASG+AAACAKLLLQPFDTVKTLQQANKGSLGM EAA+DL +R+GV +LYTGLGVTLVGSIPAVS+YFGVYQAVKKALLQALPP LGW+LLGVAASAGVGNTVAS+FRVPYEVVKQRLQAGMY STG+ALRTMYRTEGGL AFFG+SGVASQI+RDVPYAIVTLLTYES+RR RA  R      K G  K ST LEDS+MGA AGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAV  +W +EG +AF KGTVPRLLHKVPANAIFFATYEIFRGLLRVQG
Sbjct:   89 NAGWATVVEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANKGSLGMLEAAQDLVSRKGVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQG 383
[Close]
BLAST of NO01G00270 vs. NCBI_GenBank
Match: EWM28945.1 (mitochondrial carrier [Nannochloropsis gaditana])

HSP 1 Score: 487.3 bits (1253), Expect = 4.700e-134
Identity = 250/295 (84.75%), Postives = 269/295 (91.19%), Query Frame = 0 
Query:  110 DAGWATIIEGLKNGCASGLAAACAKLLLQPFDTVKTLQQANKGSLGMFEAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAAR-----RKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLLRVQG 400
            +AGWAT++EGLKNGCASG+AAACAKLLLQPFDTVKTLQQANKGSLGM EAA+DL +R+GV +LYTGLGVTLVGSIPAVS+YFGVYQAVKKALLQALPP LGW+LLGVAASAGVGNTVAS+FRVPYEVVKQRLQAGMY STG+ALRTMYRTEGGL AFFG+SGVASQI+RDVPYAIVTLLTYES+RR RA  R      K G  K ST LEDS+MGA AGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAV  +W +EG +AF KGTVPRLLHKVPANAIFFATYEIFRGLLRVQG
Sbjct:  131 NAGWATVVEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANKGSLGMLEAAQDLVSRKGVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQG 425
[Close]
BLAST of NO01G00270 vs. NCBI_GenBank
Match: CBJ29185.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 290.8 bits (743), Expect = 6.400e-75
Identity = 160/288 (55.56%), Postives = 199/288 (69.10%), Query Frame = 0 
Query:  117 IEGLKNGCASGLAAACAKLLLQPFDTVKTLQQANKGSLGMFEAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKAL--LQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKA-----GGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLLRV 398
            +EGLKNG ASGLAAAC K +LQPFDT+KT+QQ +   + + +A RDL AR GV  LY GLGVTLVGS+PAV +YFG+YQ VK  +   Q + P      L +  SAGVGN +AS FRVPYEVVKQRLQ G Y +T  A++++Y  EGGL  FFG  G+  Q  RD+PYA+VTLL YE+L+  +AAARRK        G  + P+E+ ++GA AGG+GSLV+NPMD++KTR+MT P LY     A     + EG  AFLKG  PRLLHK+PANA FF  YE FR +L V
Sbjct:  207 VEGLKNGLASGLAAACVKTVLQPFDTMKTVQQFSTTRMTLLQAGRDLLARGGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKNQMDAKQGISP-----YLSITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVAIQSIY-NEGGLLGFFGKGGLKMQWARDIPYAMVTLLVYETLQ--KAAARRKGPPGTKKKGAKANPIENMVIGAIAGGMGSLVTNPMDMIKTRMMTSPELYAGPMDAAWKALSKEGPQAFLKGATPRLLHKIPANAFFFVAYEFFRSILGV 486
[Close]
BLAST of NO01G00270 vs. NCBI_GenBank
Match: GAX21103.1 (hypothetical protein FisN_1Lh221 [Fistulifera solaris])

HSP 1 Score: 232.6 bits (592), Expect = 2.100e-57
Identity = 135/292 (46.23%), Postives = 188/292 (64.38%), Query Frame = 0 
Query:  117 IEGLKNGCASGLAAACAKLLLQPFDTVKTLQ--QANKG--SLGMFEAARDLAAR-RGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQA----LPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQPGLY-PTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLLRVQ 399
            ++GLKNG AS LAA C K  LQP D +KT+Q  Q +KG  SL ++EA R++ +R  G  + Y GLGVT++G++P+V++YFGVY   KK LL +      PT       VA SA +GN+VAS  RVPYEV+KQ+LQ G+Y+ST +AL+ +  ++  +   F   G+A Q++RDVPYA++TL+ YE+L+     +R        S  + D  +G  AGG GS  +NP DV+KTR+ T   LY  +V +    +W + G  AFL+G+VPRL+HKVPANA FF  YE FR LL V+
Sbjct:   34 VDGLKNGLASALAAGCVKTSLQPIDAIKTIQQYQQSKGTASLTIWEACREIMSRPGGFWNFYAGLGVTVIGAMPSVALYFGVYSYCKKTLLNSHWGKKHPT-----ASVALSAAIGNSVASFSRVPYEVLKQQLQTGVYTSTWQALKEISSSKEYMSLLFPKGGIAIQMLRDVPYAVITLMLYETLQNTFHKSR--------SNKVIDFCVGGAAGGFGSWATNPTDVIKTRLQTNSELYGGSVRTCTAEIWREGGIMAFLRGSVPRLVHKVPANAFFFLFYEGFRQLLGVR 312
[Close]
BLAST of NO01G00270 vs. NCBI_GenBank
Match: GAX12290.1 (hypothetical protein FisN_1Hh221 [Fistulifera solaris])

HSP 1 Score: 232.6 bits (592), Expect = 2.100e-57
Identity = 134/292 (45.89%), Postives = 185/292 (63.36%), Query Frame = 0 
Query:  117 IEGLKNGCASGLAAACAKLLLQPFDTVKTLQQANK----GSLGMFEAARDLAAR-RGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQA----LPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQPGLY-PTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLLRVQ 399
            ++GLKNG AS LAA C K  LQP D +KT+QQ  +     SL ++EA R++ +R  G  + Y GLGVT+ G++P+V++YFGVY   KK LL +      PT       VA SA +GN+VAS  RVPYEV+KQ+LQ G+Y+ST +A + +  ++  +   F   G+A Q++RDVPYA++TL+ YE+L+     +R        S  L D  +G  AGG GS  +NP DV+KTR+ T   LY  +V +    +W + GA AFL+G+VPRL+HKVPANA FF  YE FR LL V+
Sbjct:   34 VDGLKNGLASALAAGCVKTSLQPIDAIKTIQQYQQAKGTASLTIWEACREIMSRPGGFWNFYAGLGVTVFGAMPSVALYFGVYSYCKKTLLNSRWGKKHPT-----ASVALSAAIGNSVASFSRVPYEVLKQQLQTGVYTSTWQAFKEISSSKEYMSLLFPKGGIAIQMLRDVPYAVITLMLYETLQNTFHKSR--------SNKLIDFCVGGAAGGFGSWATNPTDVIKTRLQTNSELYGGSVRTCTAEIWREGGAMAFLRGSVPRLVHKVPANAFFFVFYEGFRQLLGVR 312
[Close]
BLAST of NO01G00270 vs. NCBI_GenBank
Match: EJK46885.1 (hypothetical protein THAOC_34433 [Thalassiosira oceanica])

HSP 1 Score: 231.1 bits (588), Expect = 6.000e-57
Identity = 133/291 (45.70%), Postives = 179/291 (61.51%), Query Frame = 0 
Query:  129 AAACAKLLLQPFDTVKTLQQANKG-SLGMFEAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLG---------------WTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQP-----GLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLLRVQ 399
            ++AC+K +L P DT+KT+QQ  +G SLG+FEA R +  R GV  LY GL V+ +GS+P+V +YFGVY   K+ +  A    LG                  + +A SA +GNTVAS  RVPYEVVKQ LQ G YSST  A+++M+  E GL AFF   G++ Q+ RD+PYAI TLL+YE LR   A  R +           D + G  +GG+GS ++NPMDVVKTR+ T P         ++ +    +W + G +AFL+G+VPRLLHKVPAN+ FF  YE F+ LLRV+
Sbjct:    5 SSACSKTILAPLDTIKTVQQHVEGKSLGLFEAGRIVVGRGGVGELYAGLAVSALGSMPSVGLYFGVYSYCKRTVGSAFTRCLGSQRQDGKRPLCSDESLRTISIACSAAIGNTVASFSRVPYEVVKQNLQTGKYSSTVTAMQSMW-NESGLRAFFPLGGISVQMARDIPYAIFTLLSYEFLREKWALKRSQQDPN--GRWWRDMVAGGASGGLGSYLTNPMDVVKTRIQTPPVGDSTACSGSIMACANAVWEEGGPSAFLRGSVPRLLHKVPANSCFFLFYEFFKRLLRVE 292
[Close]
BLAST of NO01G00270 vs. NCBI_GenBank
Match: XP_002293592.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89328.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 225.3 bits (573), Expect = 3.300e-55
Identity = 136/288 (47.22%), Postives = 180/288 (62.50%), Query Frame = 0 
Query:  116 IIEGLKNGCASGLAAACAKLLLQPFDTVKTLQQANKG--SLGMFEAARDLAAR-RGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQ----PGLY-PTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLL 396
            IIEGLKN  ASGLAAAC+K LL PFDT+KT+QQ  KG  SL + EAAR + AR  G+ +LY GLGV+++G++P+V +YFGVY   K+                        NTVAS  RVPYEVVKQ LQ G Y ST +AL TM+  +GG+ +FF    V+ Q++RD+PYA+ TLL+YE ++       +K+     +  L D + GA AGG+GS ++NP DV+KTR+ T       LY  ++      +  + GAAAFL+G+VPRLLHKVPAN  FF  YE F+  L
Sbjct:   58 IIEGLKNTLASGLAAACSKTLLAPFDTIKTVQQDVKGGTSLKLMEAARKVMARPGGIFNLYAGLGVSVLGAMPSVGLYFGVYSYCKR------------------------NTVASFSRVPYEVVKQSLQTGQYPSTADALSTMW-MQGGMRSFFPLGSVSIQMVRDIPYAVFTLLSYEYIKENWVL--KKSVDDPNNRWLRDMIAGATAGGIGSYLTNPFDVIKTRLQTTDIAGAALYGGSISKCAMSVLEEGGAAAFLRGSVPRLLHKVPANGFFFVFYEFFKRAL 318
[Close]
BLAST of NO01G00270 vs. NCBI_GenBank
Match: XP_002183690.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC44872.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 196.1 bits (497), Expect = 2.100e-46
Identity = 110/225 (48.89%), Postives = 149/225 (66.22%), Query Frame = 0 
Query:  168 GVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLGWT--LLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQPGLY-PTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYE 390
            G  + Y GLGVT+ G++P V++YFGVY   K+ LLQ      G +   L +A SA +GN+VAS  RVPYEVVKQ+LQ   Y +T +A + +  +E  LG  F   GVA Q++RDVPYA+VTLL YESL+   + + +++   + +    D  +G  AGG+GS V+NPMDVVKTR+ T+  LY  +V   V  +W + GAAAFL+G+VPRL+HKVPANA FF  YE
Sbjct:    2 GFVNFYAGLGVTVFGAMPGVALYFGVYSYCKRVLLQT---DFGQSHKTLSIAMSAAIGNSVASFSRVPYEVVKQQLQTQAYDTTWQAFKAIAASENWLGMIFPKGGVAVQMIRDVPYAVVTLLLYESLQSTLSRSLQQSTSQQKAW---DFALGGVAGGIGSWVTNPMDVVKTRLQTRSELYGGSVAQCVSSIWREGGAAAFLRGSVPRLMHKVPANAFFFLFYE 220
[Close]
BLAST of NO01G00270 vs. NCBI_GenBank
Match: XP_005839976.1 (hypothetical protein GUITHDRAFT_101444 [Guillardia theta CCMP2712] >EKX52996.1 hypothetical protein GUITHDRAFT_101444 [Guillardia theta CCMP2712])

HSP 1 Score: 193.7 bits (491), Expect = 1.100e-45
Identity = 123/302 (40.73%), Postives = 167/302 (55.30%), Query Frame = 0 
Query:  110 DAGWATIIEGLKNGCASGLAAACAKLLLQPFDTVKTLQQANKGSLGMFEAARDLAARRGVRSLYT-GLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESL----RRARAAARRKAGGG--------KLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLLRVQ 399
            DA  +  IEGLKN  ASGLA+A  K                    G++EA R +    G  SL+T GL VTL+GS+P+ ++YFGVYQ +K+   Q L   L + L  VA SA   N +A+ FRVP E+VKQR+QAGMY     AL+ ++  +GG  AFF    V  Q+ RD+PYA+V LLTYE L    R        K G G          +  ++   +GA AG +G+LV+ P+DVVKTR +     Y  +   +   W  EG AAF KG VPR+  K+P+++IFF  YE+FR +  V+
Sbjct:   60 DANTSPFIEGLKNSLASGLASAAGK--------------------GVWEAGRRVVKESGFCSLFTRGLDVTLIGSVPSTAVYFGVYQFLKRKFTQQL--GLEYKLTAVALSASTANFIAAFFRVPTEIVKQRVQAGMYPDATSALKLIF-ADGGFLAFFELRSVMVQVFRDIPYAVVMLLTYEILHSLFRTNVFETEAKQGRGDDSNLAAKTATASVKGLWIGATAGALGALVTTPLDVVKTRWLVDRKQYRGLVDVIVRTWLHEGPAAFFKGAVPRVAQKIPSSSIFFLLYELFRTIFGVK 338
[Close]
BLAST of NO01G00270 vs. NCBI_GenBank
Match: OEU12992.1 (mitochondrial carrier, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 170.2 bits (430), Expect = 1.300e-38
Identity = 99/222 (44.59%), Postives = 143/222 (64.41%), Query Frame = 0 
Query:  174 TGLGVTLVGSIPAVSIYFGVYQAVKKALLQALPPTLGW-TLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTGEALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAARRKAGGGKLSTPLE--DSMMGAFAGGVGSLVSNPMDVVKTRVMTQPG--LY-PTVWSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYE 390
            +G+GV +VGS+P+V +YFG+Y   KK+  +  P        L +A SA +GNT+AS  RVPYEVVKQ+ Q  +Y++ G+A+R M      L   F + G+ASQ++RD+PYAIVTLLTYE L   ++  + +A     + P+   D ++G  +GGVGS ++NPMDV+KTR+ T     LY  ++ +       + G AAF++G++PRLLHKVPANA FF  YE
Sbjct:    1 SGVGVAVVGSMPSVGLYFGIYSYCKKSFQKWDPEHYEQRQTLYIALSAAIGNTIASASRVPYEVVKQKFQTKVYTTMGDAIRDM-----SLKTLFPTGGIASQMLRDIPYAIVTLLTYEHL---KSVWKTRAQNKFPTVPVRGWDMLVGGLSGGVGSYLTNPMDVLKTRLQTDASSTLYGGSIRTCAELTLKEGGPAAFMRGSLPRLLHKVPANAFFFLFYE 214
The following BLAST results are available for this feature:
BLAST of NO01G00270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855576.14.700e-13484.75mitochondrial carrier [Nannochloropsis gaditana CC... [more]
EWM28945.14.700e-13484.75mitochondrial carrier [Nannochloropsis gaditana][more]
CBJ29185.16.400e-7555.56conserved unknown protein [Ectocarpus siliculosus][more]
GAX21103.12.100e-5746.23hypothetical protein FisN_1Lh221 [Fistulifera sola... [more]
GAX12290.12.100e-5745.89hypothetical protein FisN_1Hh221 [Fistulifera sola... [more]
EJK46885.16.000e-5745.70hypothetical protein THAOC_34433 [Thalassiosira oc... [more]
XP_002293592.13.300e-5547.22predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002183690.12.100e-4648.89predicted protein, partial [Phaeodactylum tricornu... [more]
XP_005839976.11.100e-4540.73hypothetical protein GUITHDRAFT_101444 [Guillardia... [more]
OEU12992.11.300e-3844.59mitochondrial carrier, partial [Fragilariopsis cyl... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL007nonsL007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR042ncniR042Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009787NSK009787Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00270.1NO01G00270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|676282gene_12342Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100943g2gene1666Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00270.1NO01G00270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00270 ID=NO01G00270|Name=NO01G00270|organism=Nannochloropsis oceanica|type=gene|length=1200bp
ATGCGGCTACCACAACTCCTGCTGGTGGTGGCAACACTGGTGTGCGATGG
TGCGGCCATGTTATCTTCAAAGCAATCCAAACCCTTAATGATGACCCTGC
CTTCCTCCGCCTCTGTCTCCGCCTCCTCCCCTCCTTGTTGGACTCGCCGT
CTCTCCGCCGCCATTGCCACCACTACAACCAGTCACAATAAGAGAAGAGG
AAATGACAACGATGATGCTCTTCTACTCGCTGCGAACCAGAGAAGAATAG
AGGAACAGCAACACGCCTTGTCCTCCCTCCGCACAACTCGAGGTGGTGGC
GGTGGGTCGGCGGCTGCGGGAGCAGTGGATGCGGGGTGGGCCACAATCAT
CGAAGGCCTGAAGAATGGCTGCGCCAGTGGCCTGGCCGCTGCGTGTGCCA
AACTTCTCCTCCAACCCTTTGACACGGTCAAGACCCTTCAGCAGGCCAAC
AAGGGCTCGCTAGGCATGTTTGAGGCAGCTCGAGACCTGGCGGCGCGGCG
GGGCGTCCGCTCCCTCTACACGGGCCTCGGGGTGACCCTCGTCGGCTCCA
TCCCCGCCGTCTCCATCTACTTTGGCGTCTACCAGGCCGTCAAGAAGGCC
TTGCTGCAAGCCCTCCCTCCCACCCTGGGTTGGACCCTGCTAGGCGTGGC
GGCTTCGGCCGGAGTGGGCAACACTGTCGCCTCCGTCTTTCGGGTACCGT
ACGAGGTGGTGAAACAGCGGCTGCAGGCGGGCATGTACAGCAGCACAGGG
GAGGCTTTGCGCACCATGTACCGGACGGAGGGTGGGCTGGGCGCTTTCTT
TGGGAGCAGCGGCGTAGCTTCGCAGATCATGCGGGATGTGCCCTATGCCA
TCGTCACCCTGCTCACTTACGAATCCCTCCGACGGGCTCGAGCAGCGGCC
CGGCGAAAAGCCGGAGGGGGAAAGCTGTCCACGCCCTTGGAGGACTCGAT
GATGGGAGCCTTTGCTGGGGGGGTGGGCTCCCTCGTGTCGAATCCCATGG
ACGTGGTCAAGACGCGCGTTATGACCCAACCTGGCCTCTACCCCACCGTA
TGGTCGGCCGTGCGGGGGCTATGGGCGGACGAGGGGGCGGCCGCGTTCCT
CAAGGGCACAGTGCCGCGGCTACTGCACAAGGTGCCGGCCAATGCCATCT
TTTTTGCCACGTACGAGATCTTTCGGGGGCTGTTGCGCGTGCAGGGTTAG
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protein sequence of NO01G00270.1

>NO01G00270.1-protein ID=NO01G00270.1-protein|Name=NO01G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=400bp
MRLPQLLLVVATLVCDGAAMLSSKQSKPLMMTLPSSASVSASSPPCWTRR
LSAAIATTTTSHNKRRGNDNDDALLLAANQRRIEEQQHALSSLRTTRGGG
GGSAAAGAVDAGWATIIEGLKNGCASGLAAACAKLLLQPFDTVKTLQQAN
KGSLGMFEAARDLAARRGVRSLYTGLGVTLVGSIPAVSIYFGVYQAVKKA
LLQALPPTLGWTLLGVAASAGVGNTVASVFRVPYEVVKQRLQAGMYSSTG
EALRTMYRTEGGLGAFFGSSGVASQIMRDVPYAIVTLLTYESLRRARAAA
RRKAGGGKLSTPLEDSMMGAFAGGVGSLVSNPMDVVKTRVMTQPGLYPTV
WSAVRGLWADEGAAAFLKGTVPRLLHKVPANAIFFATYEIFRGLLRVQG*
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