NO01G00170, NO01G00170 (gene) Nannochloropsis oceanica

Overview
NameNO01G00170
Unique NameNO01G00170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length654
Alignment locationchr1:28261..28914 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:28261..28914 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM30036.1 (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana])

HSP 1 Score: 109.8 bits (273), Expect = 1.100e-20
Identity = 82/218 (37.61%), Postives = 110/218 (50.46%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLSGSLGNNQAFTDEPTLSNCRKKGVPGPPSSSASKCHRIEVGPALGARLT---GKRPSTSCLLYI 216
            M RA  LLALGITL +TA Q + TL ++K +D +   +D+WSMKG L+DP   ++  I  EGL+ +L +     +    FAA+ C+   NGRGV CK  GAR+S K ++R P  A V+   N+N T     YYS SG+FRR QF             L +   F   P         +P PPS+  S C     G     R+T   G  P T  L+ I
Sbjct:   20 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGAYVQ-NSNYNST---GGYYSASGMFRRLQF-------------LQDPIVF---PLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPTPLTRGLILI 216          
BLAST of NO01G00170 vs. NCBI_GenBank
Match: XP_005855033.1 (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >EKU21331.1 hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 107.5 bits (267), Expect = 5.500e-20
Identity = 77/203 (37.93%), Postives = 104/203 (51.23%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLSGSLGNNQAFTDEPTLSNCRKKGVPGPPSSSASKCHRIEVGPALGARLT 204
            M RA  LLALGITL +TA Q + TL ++K +D +   +D+WSMKG L+DP   ++  I  EGL+ +L +     +    FAA+ C+   NGRGV CK  GAR+S K ++R P  A V+   N+N T     YYS SG+FRR QF             L +   F   P         +P PPS+  S C     G     R+T
Sbjct:    1 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGANVQ-NSNYNST---GGYYSASGMFRRLQF-------------LQDPIVF---PLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRIT 182          
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM20105.1 (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana])

HSP 1 Score: 104.8 bits (260), Expect = 3.500e-19
Identity = 64/144 (44.44%), Postives = 91/144 (63.19%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF 145
            M R LSLLALG+TL +TA Q   TL ++K  + +   +D+WSMKG L++P  +++  I   GL+ +L++     ++   FAA  C+ L NGRGV CK  GAR+S KRT+R P  AKVK+    + ++S   YY  SG+FRR QF
Sbjct:   37 MRRILSLLALGVTLVMTAGQE-FTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRR-PKGAKVKS----SNSNSTGGYYGASGMFRRLQF 174          
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM30045.1 (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana])

HSP 1 Score: 104.8 bits (260), Expect = 3.500e-19
Identity = 64/144 (44.44%), Postives = 91/144 (63.19%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF 145
            M R LSLLALG+TL +TA Q   TL ++K  + +   +D+WSMKG L++P  +++  I   GL+ +L++     ++   FAA  C+ L NGRGV CK  GAR+S KRT+R P  AKVK+    + ++S   YY  SG+FRR QF
Sbjct:    1 MRRILSLLALGVTLVMTAGQE-FTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRR-PKGAKVKS----SNSNSTGGYYGASGMFRRLQF 138          
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM22002.1 (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana])

HSP 1 Score: 101.7 bits (252), Expect = 3.000e-18
Identity = 79/192 (41.15%), Postives = 102/192 (53.12%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLSGSLGNNQAFTDEPTLSNCRKKG--------VPGPPSS 185
            M R LSLLALG+TLALT  Q ML+L SIK  + T  N+DKWSMK  L DP   ++S I   GL+  L+++ D  +   TFAA  C    N +G  CK  GAR+S + +K  P +      K+HN T     YYSVSG FRR Q +    +   L+  L      T   TL+ C  KG        VPGP ++
Sbjct:   80 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASK--PPKG---VGKSHNST---GGYYSVSGSFRRVQLQEDPVDFP-LTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAA 261          
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM22004.1 (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana])

HSP 1 Score: 101.7 bits (252), Expect = 3.000e-18
Identity = 79/192 (41.15%), Postives = 102/192 (53.12%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLSGSLGNNQAFTDEPTLSNCRKKG--------VPGPPSS 185
            M R LSLLALG+TLALT  Q ML+L SIK  + T  N+DKWSMK  L DP   ++S I   GL+  L+++ D  +   TFAA  C    N +G  CK  GAR+S + +K  P +      K+HN T     YYSVSG FRR Q +    +   L+  L      T   TL+ C  KG        VPGP ++
Sbjct:   11 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIRASK--PPKG---VGKSHNST---GGYYSVSGSFRRVQLQEDPVDFP-LTAELTVPGVGTLSQTLTGCSVKGTKTRKVTCVPGPTAA 192          
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM22005.1 (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana])

HSP 1 Score: 101.7 bits (252), Expect = 3.000e-18
Identity = 78/189 (41.27%), Postives = 99/189 (52.38%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISNSANLSGSLGNNQAFTDEPTLSNCRKKG--------VPGP 182
            M R LSLLALG+TLALT  Q ML+L SIK  + T  N+DKWSMKG L DP   ++S I   GL+  L+++ D  +   +FAA  C    N +G  CK  GAR+S  R  + P   KVK        +S   YYSVSG FR  Q +     S  L+  L      T   TL++C  +G        VPGP
Sbjct:   68 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGDCMVRKNSKGAKCKMMGARVSI-RASKPPKGVKVKTY------NSTGGYYSVSGSFRGVQLQEDPVISP-LTAELTVQGVGTLSQTLTDCSVRGAGTTRTTCVPGP 247          
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM20135.1 (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 99.0 bits (245), Expect = 1.900e-17
Identity = 63/144 (43.75%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    1 MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF 145
            M   LSLLALGITL +TA Q   TL +IK        +D+WSMKG L++P  +++  I   GL+ +L+++    ++   FAA  C+ L N RGV CK  GAR+  KRT+R P  AKVK+    +  +S   YY+ SG+FRR QF
Sbjct:    1 MRCILSLLALGITLVMTAGQE-FTLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASLSPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRR-PKAAKVKS----SSYNSTGGYYAASGMFRRLQF 138          
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM27397.1 (hypothetical protein Naga_101181g1 [Nannochloropsis gaditana])

HSP 1 Score: 98.2 bits (243), Expect = 3.300e-17
Identity = 79/211 (37.44%), Postives = 113/211 (53.55%), Query Frame = 0
Query:    1 MHRALSLLALGITLA---LTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVP-HEAKVKAMKNHNKTDSASSYYSVSGVFRRQQF-ENTISNSANLSGSLGNNQAFTDEPTLSNC----RKKG-------VPGPPSSSASKCHRIEVG 196
            M   LSLLALGITL    +T     L L SI+AVD +  N+D W MKG +NDP   ++ TI  +GL+ +L ++   L++ VTFAA  CR  ++G+   CK  GAR+  K ++R   +  K    K +N T     YYSV+G FRR  F EN + +   L+ +L  N++   + TL++C    RK G        PGPP  +     +I  G
Sbjct:   69 MRSTLSLLALGITLGSTLVTTTGQSLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVPTIGQKGLTVELQDATTDLLNTVTFAARDCRVPAHGKRAACKIRGARVFIKTSRRPKINTPKTVHAKRYNST---GGYYSVTGTFRRLTFLENPVVSP--LTAALTVNESVLSD-TLTSCYDLPRKNGRNPITHCEPGPPVPTPIWTEQIAAG 273          
BLAST of NO01G00170 vs. NCBI_GenBank
Match: EWM27399.1 (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 95.5 bits (236), Expect = 2.200e-16
Identity = 79/199 (39.70%), Postives = 112/199 (56.28%), Query Frame = 0
Query:    1 MHRALSLLALGITLA---LTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDPDADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAGARISFKRTKRVPHEAKVKAMKN-HNKT-DSASSYYSVSGVFRRQQF-ENTISNSANLSGSLGNNQAFTDEPTLSNC----RKKG-------VPGPP 183
            M   LSLLALGITL    +T A   L L SI+AVD +  N+D W MKG +NDP   ++S I  +GL+ +L ++    ++ VTFAA+ CR  ++GR   CK  GAR+S K ++R     K+K  K  H K+ +S   YYSV+G FR   F EN + +   L+ +L  +++   + TL+ C    RK G        PGPP
Sbjct:    1 MRSTLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVSAIGQKGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIKTSRR----PKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSP--LTAALTVDESVLSD-TLTLCYNLPRKNGRNTISHCEPGPP 192          
The following BLAST results are available for this feature:
BLAST of NO01G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 15
Match NameE-valueIdentityDescription
EWM30036.11.100e-2037.61hypothetical protein Naga_100179g1 [Nannochloropsi... [more]
XP_005855033.15.500e-2037.93hypothetical protein NGA_0415500 [Nannochloropsis ... [more]
EWM20105.13.500e-1944.44hypothetical protein Naga_101776g1 [Nannochloropsi... [more]
EWM30045.13.500e-1944.44hypothetical protein Naga_101600g1 [Nannochloropsi... [more]
EWM22002.13.000e-1841.15hypothetical protein Naga_100353g5 [Nannochloropsi... [more]
EWM22004.13.000e-1841.15hypothetical protein Naga_100353g6 [Nannochloropsi... [more]
EWM22005.13.000e-1841.27hypothetical protein Naga_100353g3 [Nannochloropsi... [more]
EWM20135.11.900e-1743.75hypothetical protein Naga_101626g1, partial [Nanno... [more]
EWM27397.13.300e-1737.44hypothetical protein Naga_101181g1 [Nannochloropsi... [more]
EWM27399.12.200e-1639.70hypothetical protein Naga_100212g1, partial [Nanno... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL007nonsL007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR042ncniR042Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00170.1NO01G00170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00170.1NO01G00170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00170 ID=NO01G00170|Name=NO01G00170|organism=Nannochloropsis oceanica|type=gene|length=654bp
ATGCATCGCGCCCTTTCTCTGCTTGCCCTCGGCATCACCCTCGCCCTGAC
AGCGGCTCAGCCGATGTTGACCCTCACCTCCATTAAGGCAGTCGACTCGA
CAAGCAACAATCAGGACAAATGGAGCATGAAGGGCTTCCTCAACGATCCT
GATGCCGATTTAATCTCGACCATCGCCGATGAGGGCTTGAGCGCGGACCT
TGTAAACAGTGACGATCTTCTTGTGAGTGATGTGACATTTGCCGCGGCTG
CTTGTAGAGACCTCAGCAACGGCAGGGGAGTCCTTTGCAAGGATGCGGGC
GCCCGTATCTCGTTCAAGAGGACGAAGAGGGTACCGCATGAGGCCAAGGT
GAAGGCGATGAAGAACCACAACAAGACGGACAGCGCTTCTTCCTACTACA
GTGTGTCGGGTGTTTTCCGCCGTCAGCAATTCGAGAACACTATCTCTAAC
TCAGCGAATCTATCAGGAAGTCTTGGCAACAACCAGGCATTTACTGACGA
GCCCACACTCTCTAACTGCAGGAAGAAGGGGGTGCCAGGACCACCAAGCT
CTTCTGCCAGTAAATGCCATCGCATTGAGGTCGGGCCTGCACTCGGCGCT
CGACTCACCGGCAAGAGACCCTCCACGTCCTGCCTCTTGTATATCTATGT
GTGA
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protein sequence of NO01G00170.1

>NO01G00170.1-protein ID=NO01G00170.1-protein|Name=NO01G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=218bp
MHRALSLLALGITLALTAAQPMLTLTSIKAVDSTSNNQDKWSMKGFLNDP
DADLISTIADEGLSADLVNSDDLLVSDVTFAAAACRDLSNGRGVLCKDAG
ARISFKRTKRVPHEAKVKAMKNHNKTDSASSYYSVSGVFRRQQFENTISN
SANLSGSLGNNQAFTDEPTLSNCRKKGVPGPPSSSASKCHRIEVGPALGA
RLTGKRPSTSCLLYIYV*
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Synonyms
Publications