EWM20679.1, cds9994 (CDS) Nannochloropsis gaditana

Overview
NameEWM20679.1
Unique Namecds9994
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037260.1:28897..28987 -
Alignment locationKK037260.1:28647..28813 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20679.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100704g3.5540.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037260.1supercontigKK037260.1:28897..28987 -
KK037260.1supercontigKK037260.1:28647..28813 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20679.1 vs. NCBI_GenBank
Match: gi|585100497|gb|EWM20679.1| (hypothetical protein Naga_100704g3 [Nannochloropsis gaditana])

HSP 1 Score: 174.866 bits (442), Expect = 1.960e-55
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 
Query:    1 MLDLCKRLRQETIIESIRSSFLGLVDPWKQENKTRSNIAPPLSCTLLSYKSEMYFRRDRVIAVIQASILDRRDNTRLLEHGSKRE 85
            MLDLCKRLRQETIIESIRSSFLGLVDPWKQENKTRSNIAPPLSCTLLSYKSEMYFRRDRVIAVIQASILDRRDNTRLLEHGSKRE
Sbjct:    1 MLDLCKRLRQETIIESIRSSFLGLVDPWKQENKTRSNIAPPLSCTLLSYKSEMYFRRDRVIAVIQASILDRRDNTRLLEHGSKRE 85
The following BLAST results are available for this feature:
BLAST of EWM20679.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100497|gb|EWM20679.1|1.960e-55100.00hypothetical protein Naga_100704g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10025rna10025Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications