EWM20681.1, cds9993 (CDS) Nannochloropsis gaditana

Overview
NameEWM20681.1
Unique Namecds9993
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037260.1:26527..27851 +
Alignment locationKK037260.1:28175..28367 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20681.1
Productshort-chain dehydrogenase
Orig transcript idgnl|cribi|Naga_100704g2.5542.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037260.1supercontigKK037260.1:26527..27851 +
KK037260.1supercontigKK037260.1:28175..28367 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR002198DH_sc/Rdtase_SDR
IPR002347Glc/ribitol_DH
Homology
BLAST of EWM20681.1 vs. NCBI_GenBank
Match: gi|585100499|gb|EWM20681.1| (short-chain dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 1026.16 bits (2652), Expect = 0.000e+0
Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0
Query:    1 MSISTNTPSIRRQRGIERMLLAVLSLGTVLVQAKAFSFHGGGGVGSCATKVGSRFVVPTLFSPGCMSMARPVTPLLASLRGGATNGAEGGRDVASSRVRVREVRRNGYTADGRRRLLSMRELFGHQEGSPEGNDSSGGLFSAAGSQKLFSRDGALRLVGYAAVAYIGKQVFNGGRYDENPDLAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAHRFGGLDPQDPNYLRREYKKWEAYGQSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYLIDDIPSVGKVALAPLALAGWYFTKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKEAEDLALAGELWKLSEKLTGSSFSV 505
            MSISTNTPSIRRQRGIERMLLAVLSLGTVLVQAKAFSFHGGGGVGSCATKVGSRFVVPTLFSPGCMSMARPVTPLLASLRGGATNGAEGGRDVASSRVRVREVRRNGYTADGRRRLLSMRELFGHQEGSPEGNDSSGGLFSAAGSQKLFSRDGALRLVGYAAVAYIGKQVFNGGRYDENPDLAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAHRFGGLDPQDPNYLRREYKKWEAYGQSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYLIDDIPSVGKVALAPLALAGWYFTKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKEAEDLALAGELWKLSEKLTGSSFSV
Sbjct:    1 MSISTNTPSIRRQRGIERMLLAVLSLGTVLVQAKAFSFHGGGGVGSCATKVGSRFVVPTLFSPGCMSMARPVTPLLASLRGGATNGAEGGRDVASSRVRVREVRRNGYTADGRRRLLSMRELFGHQEGSPEGNDSSGGLFSAAGSQKLFSRDGALRLVGYAAVAYIGKQVFNGGRYDENPDLAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAHRFGGLDPQDPNYLRREYKKWEAYGQSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYLIDDIPSVGKVALAPLALAGWYFTKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKEAEDLALAGELWKLSEKLTGSSFSV 505          
BLAST of EWM20681.1 vs. NCBI_GenBank
Match: gi|551659725|ref|XP_005832631.1| (hypothetical protein GUITHDRAFT_152655 [Guillardia theta CCMP2712] >gi|428176768|gb|EKX45651.1| hypothetical protein GUITHDRAFT_152655 [Guillardia theta CCMP2712])

HSP 1 Score: 286.574 bits (732), Expect = 3.300e-89
Identity = 163/374 (43.58%), Postives = 219/374 (58.56%), Query Frame = 0
Query:  149 FSRDGALRLVGYAAVAYIGKQVFNGGRYDENPDLAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAH--RFGGLDPQDPNYLRREYKKWEAYGQSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYL------------ID---DIPSVGKVALAPLALAGWYFTKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKEAEDLALAGELWKLSEKLTGSSFSV 505
            F R    ++ G AA   +GK+V +GG Y   PDL G+VAV+TG NTG+GKET IRLA +GA V++A R+ E+GE A ++I                 +A+    ++ ++ LDLA LKSI+ FA+EL  R D++D+L+NNAGVMA+   E TKDG ER +G+NH GHFHLTN L   + K        RI+N++S+AH   F G++  D    +  Y  W+AYGQSKLANILFT+EL RRL   G D  + A   HPGVVRTELGR              +D    +P    VA A L     Y ++ P QG+QTQV  +  P LK        +GG YF DC     +  A+D + A +LW++SE+LTGS F+V
Sbjct:   10 FDRRTFGKVAGGAAALVLGKKVLDGGDYTGTPDLTGQVAVVTGANTGLGKETCIRLAKLGAEVVLASRSKERGEKAEKEI-----------------RALTGSDKLSTMELDLASLKSIELFASELRSRHDKIDLLVNNAGVMAIPTREETKDGLERQIGINHFGHFHLTNLLLPQIKKASEKSGDARIINLSSDAHLIAFNGMNFDDLQS-KSSYDPWKAYGQSKLANILFTKELQRRL---GADSPVSAAAVHPGVVRTELGRNFFLPPELCSSLGSVDCKGQLPPAALVAGAVLLPLAVYTSRDPAQGAQTQVRCSVDPELK------GKLGGRYFRDCHEAAPSPAAQDASAALKLWEISEELTGSKFNV 356          
BLAST of EWM20681.1 vs. NCBI_GenBank
Match: gi|873219146|emb|CEM38194.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 255.373 bits (651), Expect = 4.737e-77
Identity = 151/342 (44.15%), Postives = 204/342 (59.65%), Query Frame = 0
Query:  168 KQVFNGGRYDENPDLAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAHRFGGLDPQDPNYLRREYKKWEAYG-QSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYLI--DDIP--SVGKVALAPLALAGWYFTKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKEAEDLALAGELWKLSEKLTGSSFS 504
            K+V +G  Y    DL+G   VITGGNTG+GK  A+RLA++GA V IACR+P K E AV+DI  A           SG  A+++ P      LDL D  SI   A EL  R+ ++D+L+NNAGVMA+   E T DG+E+ +G+NHLGHF LT+ +  LL    +     R+VNV+S+AH    LD  D  +L ++Y  W AYG +  L N              G  +++ AV CHPG+VRTELGRY    D+IP    G + L PL + G Y ++SP++G+QTQ+Y AA PTL     QG A GG YF DC     +K+A D  +A  LW++SEKLTG+S++
Sbjct:   64 KRVIDGPVYSNVVDLSGENIVITGGNTGLGKAAAVRLAALGAAVTIACRSPSKAEAAVKDIQQA-----------SGSSAVDAVP------LDLTDSSSIASCARELSGRLGKIDVLMNNAGVMAIPNRETTADGYEKQMGINHLGHFRLTSLVLPLLAAASTP----RVVNVSSKAHTLAKLDFSD-FFLTKDYDPWVAYGNKGSLGN------------AAGNLRQLTAVSCHPGLVRTELGRYFFNTDNIPLFPFGWL-LTPLLIPGIYASRSPERGAQTQIYCAAEPTL-----QGTA-GGEYFEDCHISTPSKDARDRQMAARLWEVSEKLTGASWN 364          
BLAST of EWM20681.1 vs. NCBI_GenBank
Match: gi|298710420|emb|CBJ25484.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 249.98 bits (637), Expect = 1.887e-74
Identity = 158/349 (45.27%), Postives = 193/349 (55.30%), Query Frame = 0
Query:  165 YIGKQVFNGGRYDENPDLAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAHRFGG------LDPQDPNYLRREYKKWEAYGQSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYLIDDIPSVGKVALAPLALAGWYF-TKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKE-AEDLALAGELWKLSEKLTGSSFSV 505
            ++ K    G  Y  +PDL+G+ AVITGGNTG+GKETA+RLA +GA V IACRNP+K   A+ DI                 KA     +V ++ LDLA L S+  FA       DR+D+L+NNAGVMA+   + TKDGFE   G NHLGHF LT+ L   LLK        R+VNVAS AH F        L+ Q P      Y  W+AYG SKL+NI FT+ L RR+  KG    I A   HPG  RTELGRYL D  PS     L   ALA     TKS K+G+QTQ+  AA P L     +G++ GGTYF   +  +   E A D   A  +W  SEKL G  FSV
Sbjct:   94 FVQKGFVAGVPYHGSPDLSGKTAVITGGNTGLGKETAVRLAQLGADVTIACRNPDKAFAALDDI-----------------KAQAPGAKVGAMPLDLASLDSVGSFAKRYASSSDRLDILVNNAGVMAIPERQATKDGFEMQFGTNHLGHFRLTSLLMPALLK----SPDARVVNVASSAHLFASSVEWDDLNAQAPG----AYAPWKAYGLSKLSNIYFTKALQRRVDSKG--GSITATTLHPGACRTELGRYLFD--PSQPANPLVYPALAALTLVTKSSKEGAQTQIACAADPALG----KGSSAGGTYFVGPKISELPSELARDPEAAERMWAASEKLVG-KFSV 408          
BLAST of EWM20681.1 vs. NCBI_GenBank
Match: gi|1121132648|ref|XP_019553846.1| (PREDICTED: retinol dehydrogenase 12-like isoform X1 [Aedes albopictus])

HSP 1 Score: 238.039 bits (606), Expect = 1.175e-70
Identity = 147/341 (43.11%), Postives = 191/341 (56.01%), Query Frame = 0
Query:  162 AVAYIGKQVFNGGRYDENPD--LAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAHRFGGLDPQDPNYLRREYKKWEAYGQSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYLIDDIPSVGKVALAPLALAGWYFTKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKEAEDLALAGELWKLSEKLTG 500
            A+ Y  ++ F GG++ +N D  L  +V +ITG N+GIGKETA+  A  GARV + CR+  + E A ++ILD            SG +       V  L LDLA   SI  F         R+ +LINNAGVMA  + E TK+GFE H GVNHLGHF+LTN L D+L +   +    RIV V+S AH++G +D  D N   ++Y +W AY QSKL NILF+R L +RL   G    +   C HPG + TEL RYL         +A  PL    W F KS K GSQT +Y A  PT+       A   G Y+SDC+ K+   +A D A+A  LW +SEKLTG
Sbjct:   39 AIVYFVRKFFQGGQF-KNKDIRLDAKVVIITGANSGIGKETAVECAKRGARVYMGCRDANRMEKARQEILDK-----------SGSQ------NVFGLELDLASFDSIRNFVRTFLSMERRLHVLINNAGVMACPK-EYTKEGFEMHFGVNHLGHFYLTNLLLDVLKRTAPS----RIVTVSSLAHKWGRIDKDDINS-EKDYHEWGAYMQSKLCNILFSRHLAKRLRGTG----VHTYCLHPGTINTELTRYL----NRCMMIAAKPLL---WVFFKSAKSGSQTTLYCAMEPTI-------AGDTGKYYSDCKLKEPEPQARDDAMAEWLWNISEKLTG 337          
BLAST of EWM20681.1 vs. NCBI_GenBank
Match: gi|157136153|ref|XP_001663677.1| (AAEL013483-PA [Aedes aegypti] >gi|108870027|gb|EAT34252.1| AAEL013483-PA [Aedes aegypti])

HSP 1 Score: 234.958 bits (598), Expect = 1.666e-69
Identity = 146/341 (42.82%), Postives = 187/341 (54.84%), Query Frame = 0
Query:  162 AVAYIGKQVFNGGRYDENPD--LAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAHRFGGLDPQDPNYLRREYKKWEAYGQSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYLIDDIPSVGKVALAPLALAGWYFTKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKEAEDLALAGELWKLSEKLTG 500
            A  Y  ++ F GG++ +N D  L  +V +ITG N+GIGKETAI  A  GARV + CR+  + E A ++ILD                  +    V  L LDLA   SI  F         R+ +LINNAGVMA  + E TKDGFE H GVNHLGHF+LTN L D+L +   +    RIV V+S  H++G +D  D N   ++Y++W AY QSKL NILF+R L +RL   G    I   C HPG V TEL RY          +A  PL    W F KS K G+QT +Y A  PT+       A   G Y+SDC+ K+    A+D A+A  LW +SEKLTG
Sbjct:   37 AFVYFVRKFFQGGQF-KNKDIRLDAKVVIITGANSGIGKETAIECAKRGARVYMGCRDANRMEKARQEILDK-----------------SGSQNVFGLELDLASFDSIRNFVRTFLSMERRLHVLINNAGVMACPK-EYTKDGFEMHFGVNHLGHFYLTNLLVDVLKRTAPS----RIVTVSSLGHKWGRIDKDDINS-EKDYREWGAYMQSKLCNILFSRHLAKRLRGTG----IHTYCLHPGTVNTELTRYQ----NRCMMIAAKPLL---WVFFKSAKSGAQTTLYCAMEPTI-------AGDTGKYYSDCKLKEPEPHAKDDAMAEWLWNISEKLTG 335          
BLAST of EWM20681.1 vs. NCBI_GenBank
Match: gi|919062180|ref|XP_013412742.1| (PREDICTED: retinol dehydrogenase 12-like [Lingula anatina])

HSP 1 Score: 233.802 bits (595), Expect = 4.155e-69
Identity = 145/333 (43.54%), Postives = 192/333 (57.66%), Query Frame = 0
Query:  168 KQVFNGGRYDENPDLAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAHRFGGLDPQDPNYLRREYKKWEAYGQSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYLIDDIPSVGKVALAPLALAGWYFTKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKEAEDLALAGELWKLSEKLTG 500
            K+  +GG       L G+  VITG NTGIGKETAI LA  GARV++ACR+ EKG  A++++ DA           SG     SP  V    LDLA LKS+ + A E+ K  D++++LINNAGVM +    +T+DGFE   G NHLGHF  T+ L D +     T    RIVNV+S AH FG ++ +D     ++Y    AYGQSKLANILFTREL R+L   G+    L    HPG V+TEL R+ + D   + K    PL    W   K+  QG+QT +Y A        AE+   + G Y+SDC  KKT++ A++   A +LW++SEKL G
Sbjct:   37 KRYTSGGVCRSTARLEGKTVVITGANTGIGKETAIDLAKRGARVILACRDMEKGSQALKEVCDA-----------SG-----SPHNVALYHLDLASLKSVRKCADEILKSEDKINILINNAGVM-MCPYTKTEDGFEMQFGTNHLGHFLFTHLLLDRI----KTSAPSRIVNVSSVAHSFGKMNFEDL-MSEKKYNSITAYGQSKLANILFTRELARKLEGTGVTVYAL----HPGAVKTELARHTVFD-SQIFKFLFFPLI---WLLWKNSWQGAQTSIYCAV-------AEELEGISGKYYSDCAEKKTSRLAQNDDDARKLWEISEKLVG 332          
BLAST of EWM20681.1 vs. NCBI_GenBank
Match: gi|1121132650|ref|XP_019553847.1| (PREDICTED: retinol dehydrogenase 11-like isoform X2 [Aedes albopictus])

HSP 1 Score: 231.876 bits (590), Expect = 6.897e-69
Identity = 145/334 (43.41%), Postives = 187/334 (55.99%), Query Frame = 0
Query:  169 QVFNGGRYDENPD--LAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAHRFGGLDPQDPNYLRREYKKWEAYGQSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYLIDDIPSVGKVALAPLALAGWYFTKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKEAEDLALAGELWKLSEKLTG 500
            + F GG++ +N D  L  +V +ITG N+GIGKETA+  A  GARV + CR+  + E A ++ILD            SG +       V  L LDLA   SI  F         R+ +LINNAGVMA  + E TK+GFE H GVNHLGHF+LTN L D+L +   +    RIV V+S AH++G +D  D N   ++Y +W AY QSKL NILF+R L +RL   G    +   C HPG + TEL RYL         +A  PL    W F KS K GSQT +Y A  PT+       A   G Y+SDC+ K+   +A D A+A  LW +SEKLTG
Sbjct:    2 KFFQGGQF-KNKDIRLDAKVVIITGANSGIGKETAVECAKRGARVYMGCRDANRMEKARQEILDK-----------SGSQ------NVFGLELDLASFDSIRNFVRTFLSMERRLHVLINNAGVMACPK-EYTKEGFEMHFGVNHLGHFYLTNLLLDVLKRTAPS----RIVTVSSLAHKWGRIDKDDINS-EKDYHEWGAYMQSKLCNILFSRHLAKRLRGTG----VHTYCLHPGTINTELTRYL----NRCMMIAAKPLL---WVFFKSAKSGSQTTLYCAMEPTI-------AGDTGKYYSDCKLKEPEPQARDDAMAEWLWNISEKLTG 293          
BLAST of EWM20681.1 vs. NCBI_GenBank
Match: gi|405977165|gb|EKC41628.1| (Retinol dehydrogenase 13 [Crassostrea gigas])

HSP 1 Score: 227.254 bits (578), Expect = 8.157e-67
Identity = 143/334 (42.81%), Postives = 191/334 (57.19%), Query Frame = 0
Query:  168 KQVFNGGRYDENPDLAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAH-RFGGLDPQDPNYLRREYKKWEAYGQSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYLIDDIPSVGKVALAPLALAGWYFTKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKEAEDLALAGELWKLSEKLTG 500
            ++ F GG       L G+  +ITG NTGIGKETAI LAS GA+V++ACR+  + E A  DI+               +K+ N    V+  ++DLA L SI +FA  + K   ++D+LINNAG+M      +T+DGFE   GVNHLGHF LTN L D +     +    RI+NV+S AH     LD  D N   + Y     Y QSKLAN+LFTREL RRL  +G +  + A   HPGVV TEL RYL   +P   ++ LAP+    +   K+P QG+QT +Y A   +L       A+V G YFSDC  K+ +K A+D   A +LW++SEKL G
Sbjct:   11 RRYFAGGVCRSKARLDGKTVIITGANTGIGKETAIDLASRGAKVILACRDVIRAERAATDIM---------------KKSNNRNIVVK--IVDLASLDSIRKFADNINKSEPKIDILINNAGIMMCPYW-KTQDGFEMQFGVNHLGHFLLTNLLLDKI----KSSAPARIINVSSHAHTHTDKLDFDDLNG-EKNYNSITVYRQSKLANVLFTRELSRRL--QGTN--VTANSLHPGVVDTELTRYLPRSVPFYFRILLAPII---YLLGKTPLQGAQTTIYCAVEESL-------ASVTGKYFSDCAIKEESKAAQDDEAAKKLWEISEKLVG 307          
BLAST of EWM20681.1 vs. NCBI_GenBank
Match: gi|1139814348|ref|XP_019925634.1| (PREDICTED: retinol dehydrogenase 13 [Crassostrea gigas])

HSP 1 Score: 227.639 bits (579), Expect = 8.470e-67
Identity = 147/357 (41.18%), Postives = 195/357 (54.62%), Query Frame = 0
Query:  146 QKLFSRDGALRLVGYAAVAYIG-KQVFNGGRYDENPDLAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAH-RFGGLDPQDPNYLRREYKKWEAYGQSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYLIDDIPSVGKVALAPLALAGWYFTKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKEAEDLALAGELWKLSEKLTG 500
            Q L      L L  +  V++   ++ F GG       L G+  +ITG NTGIGKETAI LAS GA+V++ACR+  + E A  DI+               +K+ N    V+  ++DLA L SI +FA  + K   ++D+LINNAG+M      +T+DGFE   GVNHLGHF LTN    LLL    +    RI+NV+S AH     LD  D N   + Y     Y QSKLAN+LFTREL RRL    +    L    HPG+V TEL RYL   +P   ++ LAP+    +   K+P QG+QT +Y A   +L       A V G YFSDC  K+ +K A+D   A +LW++SEKL G
Sbjct:    5 QPLHCFHFGLYLTTFVGVSFTAIRRYFAGGVCRSKARLDGKTVIITGANTGIGKETAIDLASRGAKVILACRDVIRAERAATDIM---------------KKSNNRNIVVK--IVDLASLDSIRKFADNINKSEPKIDILINNAGIMMCPYW-KTQDGFEMQFGVNHLGHFLLTN----LLLDKIKSSAPARIINVSSHAHTHTDKLDFDDLNG-EKNYNSIAVYHQSKLANVLFTRELSRRLQGTNVKANSL----HPGIVDTELTRYLPRSVPFYFRILLAPII---YLLGKTPLQGAQTTIYCAVEESL-------ANVTGKYFSDCAIKEESKAAQDDEAAKKLWEVSEKLVG 324          
The following BLAST results are available for this feature:
BLAST of EWM20681.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100499|gb|EWM20681.1|0.000e+0100.00short-chain dehydrogenase [Nannochloropsis gaditan... [more]
gi|551659725|ref|XP_005832631.1|3.300e-8943.58hypothetical protein GUITHDRAFT_152655 [Guillardia... [more]
gi|873219146|emb|CEM38194.1|4.737e-7744.15unnamed protein product [Vitrella brassicaformis C... [more]
gi|298710420|emb|CBJ25484.1|1.887e-7445.27conserved unknown protein [Ectocarpus siliculosus][more]
gi|1121132648|ref|XP_019553846.1|1.175e-7043.11PREDICTED: retinol dehydrogenase 12-like isoform X... [more]
gi|157136153|ref|XP_001663677.1|1.666e-6942.82AAEL013483-PA [Aedes aegypti] >gi|108870027|gb|EAT... [more]
gi|919062180|ref|XP_013412742.1|4.155e-6943.54PREDICTED: retinol dehydrogenase 12-like [Lingula ... [more]
gi|1121132650|ref|XP_019553847.1|6.897e-6943.41PREDICTED: retinol dehydrogenase 11-like isoform X... [more]
gi|405977165|gb|EKC41628.1|8.157e-6742.81Retinol dehydrogenase 13 [Crassostrea gigas][more]
gi|1139814348|ref|XP_019925634.1|8.470e-6741.18PREDICTED: retinol dehydrogenase 13 [Crassostrea g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10024rna10024Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications